RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 FTSJ1Q9UET6 329 aa9.5□□□□□ -0.89
SNX13-203ENST00000428135 UTS2RQ9UKP6 389 aa9.5□□□□□ -0.89
SNX13-203ENST00000428135 RIIAD1A6NNX1 92 aa9.5□□□□□ -0.89
SNX13-203ENST00000428135 PIRO00625 290 aa9.5□□□□□ -0.89
SNX13-203ENST00000428135 NR2F6P10588 404 aa9.5□□□□□ -0.89
SNX13-203ENST00000428135 EPCAMP16422 314 aa9.5□□□□□ -0.89
SNX13-203ENST00000428135 MPIP34949 423 aa9.5□□□□□ -0.89
SNX13-203ENST00000428135 GRK6P43250 576 aa9.5□□□□□ -0.89
SNX13-203ENST00000428135 EIF2B2P49770 351 aaKnown RBP9.5□□□□□ -0.89
SNX13-203ENST00000428135 AGTR2P50052 363 aa9.5□□□□□ -0.89
SNX13-203ENST00000428135 PTP4A2Q12974 167 aa9.5□□□□□ -0.89
SNX13-203ENST00000428135 MSS51Q4VC12 460 aa9.5□□□□□ -0.89
SNX13-203ENST00000428135 MFSD5Q6N075 450 aa9.5□□□□□ -0.89
SNX13-203ENST00000428135 MR1Q95460 341 aa9.5□□□□□ -0.89
SNX13-203ENST00000428135 FAM192AQ9GZU8 254 aa9.5□□□□□ -0.89
SNX13-203ENST00000428135 ZNF304Q9HCX3 659 aa9.5□□□□□ -0.89
SNX13-203ENST00000428135 NDUFA13Q9P0J0 144 aa9.5□□□□□ -0.89
SNX13-203ENST00000428135 SLCO3A1Q9UIG8 710 aa9.5□□□□□ -0.89
SNX13-203ENST00000428135 OR1A2Q9Y585 309 aa9.5□□□□□ -0.89
SNX13-203ENST00000428135 STRCP1A6NGW2 1772 aa9.5□□□□□ -0.89
SNX13-203ENST00000428135 IGLON5A6NGN9 336 aa9.5□□□□□ -0.89
SNX13-203ENST00000428135 BCKDKO14874 412 aa9.5□□□□□ -0.89
SNX13-203ENST00000428135 CDH1P12830 882 aa9.5□□□□□ -0.89
SNX13-203ENST00000428135 VSX2P58304 361 aaPredicted RBP9.5□□□□□ -0.89
SNX13-203ENST00000428135 RPS13P62277 151 aaKnown RBP9.5□□□□□ -0.89
SNX13-203ENST00000428135 TARDBPQ13148 414 aaKnown RBP eCLIP9.5□□□□□ -0.897e-7■■■■□ 23
SNX13-203ENST00000428135 RAB6CQ53S08 254 aa9.5□□□□□ -0.89
SNX13-203ENST00000428135 DPY19L3Q6ZPD9 716 aa9.5□□□□□ -0.89
SNX13-203ENST00000428135 ZBED6CLQ96FA7 236 aaPredicted RBP9.5□□□□□ -0.89
SNX13-203ENST00000428135 COL21A1Q96P44 957 aa9.5□□□□□ -0.89
SNX13-203ENST00000428135 SLC35A5Q9BS91 424 aa9.5□□□□□ -0.89
SNX13-203ENST00000428135 RAB6CQ9H0N0 254 aa9.5□□□□□ -0.89
SNX13-203ENST00000428135 TRPS1Q9UHF7 1281 aa9.5□□□□□ -0.89
SNX13-203ENST00000428135 RNF11Q9Y3C5 154 aa9.5□□□□□ -0.89
SNX13-203ENST00000428135 LAMTOR5O43504 91 aa9.5□□□□□ -0.89
SNX13-203ENST00000428135 NOS1APO75052 506 aaPredicted RBP9.5□□□□□ -0.89
SNX13-203ENST00000428135 ALPPP05187 535 aa9.5□□□□□ -0.89
SNX13-203ENST00000428135 KLK3P07288 261 aaPredicted RBP9.5□□□□□ -0.89
SNX13-203ENST00000428135 CCNFP41002 786 aa9.5□□□□□ -0.89
SNX13-203ENST00000428135 VLDLRP98155 873 aa9.5□□□□□ -0.89
SNX13-203ENST00000428135 KRR1Q13601 381 aaKnown RBP9.5□□□□□ -0.89
SNX13-203ENST00000428135 ODF4Q2M2E3 257 aa9.5□□□□□ -0.89
SNX13-203ENST00000428135 C1orf94Q6P1W5 598 aa9.5□□□□□ -0.89
SNX13-203ENST00000428135 RBM44Q6ZP01 1051 aaKnown RBP9.5□□□□□ -0.89
SNX13-203ENST00000428135 RANBP3LQ86VV4 465 aaPredicted RBP9.5□□□□□ -0.89
SNX13-203ENST00000428135 GKN2Q86XP6 184 aa9.5□□□□□ -0.89
SNX13-203ENST00000428135 NAT8LQ8N9F0 302 aa9.5□□□□□ -0.89
SNX13-203ENST00000428135 SLC38A4Q969I6 547 aa9.5□□□□□ -0.89
SNX13-203ENST00000428135 HRASLS2Q9NWW9 162 aa9.5□□□□□ -0.89
SNX13-203ENST00000428135 NWD2Q9ULI1 1742 aa9.5□□□□□ -0.89
SNX13-203ENST00000428135 CITO14578 2027 aa9.5□□□□□ -0.89
SNX13-203ENST00000428135 BBIP1A8MTZ0 92 aa9.5□□□□□ -0.89
SNX13-203ENST00000428135 FADS2P1A8MWK0 482 aa9.5□□□□□ -0.89
SNX13-203ENST00000428135 H7BY64 318 aa9.5□□□□□ -0.89
SNX13-203ENST00000428135 CXCR6O00574 342 aa9.5□□□□□ -0.89
SNX13-203ENST00000428135 EIF1AYO14602 144 aaKnown RBP9.5□□□□□ -0.89
SNX13-203ENST00000428135 BCHEP06276 602 aa9.5□□□□□ -0.89
SNX13-203ENST00000428135 SCNN1AP37088 669 aa9.5□□□□□ -0.89
SNX13-203ENST00000428135 DNASE1L1P49184 302 aa9.5□□□□□ -0.89
SNX13-203ENST00000428135 NRG3P56975 720 aa9.5□□□□□ -0.89
SNX13-203ENST00000428135 TMEM115Q12893 351 aaPredicted RBP9.5□□□□□ -0.89
SNX13-203ENST00000428135 AAK1Q2M2I8 961 aa9.5□□□□□ -0.89
SNX13-203ENST00000428135 RFTN2Q52LD8 501 aaPredicted RBP9.5□□□□□ -0.89
SNX13-203ENST00000428135 UBE2J2Q8N2K1 259 aa9.5□□□□□ -0.89
SNX13-203ENST00000428135 PRAP1Q96NZ9 151 aa9.5□□□□□ -0.89
SNX13-203ENST00000428135 ADAMTS10Q9H324 1103 aa9.5□□□□□ -0.89
SNX13-203ENST00000428135 TBC1D17Q9HA65 648 aa9.5□□□□□ -0.89
SNX13-203ENST00000428135 VPS29Q9UBQ0 182 aa9.5□□□□□ -0.89
SNX13-203ENST00000428135 NHSL1Q5SYE7 1610 aa9.5□□□□□ -0.89
SNX13-203ENST00000428135 BTN3A3O00478 584 aa9.49□□□□□ -0.89
SNX13-203ENST00000428135 TFECO14948 347 aaPredicted RBP9.49□□□□□ -0.89
SNX13-203ENST00000428135 GADD45GO95257 159 aa9.49□□□□□ -0.89
SNX13-203ENST00000428135 GALK1P51570 392 aa9.49□□□□□ -0.89
SNX13-203ENST00000428135 PUM1Q14671 1186 aaKnown RBP eCLIP9.49□□□□□ -0.89
SNX13-203ENST00000428135 TIMM50Q3ZCQ8 353 aa9.49□□□□□ -0.89
SNX13-203ENST00000428135 NUP54Q7Z3B4 507 aa9.49□□□□□ -0.89
SNX13-203ENST00000428135 APCDD1Q8J025 514 aa9.49□□□□□ -0.89
SNX13-203ENST00000428135 SFRP1Q8N474 314 aa9.49□□□□□ -0.89
SNX13-203ENST00000428135 PLA2G15Q8NCC3 412 aa9.49□□□□□ -0.89
SNX13-203ENST00000428135 PIGXQ8TBF5 258 aa9.49□□□□□ -0.89
SNX13-203ENST00000428135 SEZ6LQ9BYH1 1024 aa9.49□□□□□ -0.89
SNX13-203ENST00000428135 SEC61A2Q9H9S3 476 aa9.49□□□□□ -0.89
SNX13-203ENST00000428135 RUVBL1Q9Y265 456 aaKnown RBP9.49□□□□□ -0.89
SNX13-203ENST00000428135 FADS3Q9Y5Q0 445 aa9.49□□□□□ -0.89
SNX13-203ENST00000428135 ASNA1O43681 348 aa9.49□□□□□ -0.89
SNX13-203ENST00000428135 FCER2P06734 321 aa9.49□□□□□ -0.89
SNX13-203ENST00000428135 DLDP09622 509 aaKnown RBP9.49□□□□□ -0.89
SNX13-203ENST00000428135 HNF1BP35680 557 aa9.49□□□□□ -0.89
SNX13-203ENST00000428135 C1orf189Q5VU69 101 aa9.49□□□□□ -0.89
SNX13-203ENST00000428135 OLFML2AQ68BL7 652 aa9.49□□□□□ -0.89
SNX13-203ENST00000428135 SLC29A4Q7RTT9 530 aa9.49□□□□□ -0.89
SNX13-203ENST00000428135 POC5Q8NA72 575 aa9.49□□□□□ -0.89
SNX13-203ENST00000428135 RGMAQ96B86 450 aa9.49□□□□□ -0.89
SNX13-203ENST00000428135 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.49□□□□□ -0.89
SNX13-203ENST00000428135 AMBNQ9NP70 447 aa9.49□□□□□ -0.89
SNX13-203ENST00000428135 TRPM3Q9HCF6 1732 aaPredicted RBP9.49□□□□□ -0.89
SNX13-203ENST00000428135 ELOA3DA6NLF2 546 aaPredicted RBP9.49□□□□□ -0.89
SNX13-203ENST00000428135 STX16-NPEPL1H3BU86 382 aa9.49□□□□□ -0.89
SNX13-203ENST00000428135 STX16O14662 325 aa9.49□□□□□ -0.89
SNX13-203ENST00000428135 GABRDO14764 452 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms