RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 RAD51CO43502 376 aa8.79□□□□□ -1
SMC1A-203ENST00000428014 SNRNP200O75643 2136 aaKnown RBP8.79□□□□□ -1
SMC1A-203ENST00000428014 EZRP15311 586 aaKnown RBP8.79□□□□□ -1
SMC1A-203ENST00000428014 CYP2A7P20853 494 aa8.79□□□□□ -1
SMC1A-203ENST00000428014 AGXTP21549 392 aa8.79□□□□□ -1
SMC1A-203ENST00000428014 FDXRP22570 491 aa8.79□□□□□ -1
SMC1A-203ENST00000428014 GABRB3P28472 473 aa8.79□□□□□ -1
SMC1A-203ENST00000428014 PTPN4P29074 926 aa8.79□□□□□ -1
SMC1A-203ENST00000428014 CMPK1P30085 196 aa8.79□□□□□ -1
SMC1A-203ENST00000428014 PEBP1P30086 187 aaKnown RBP8.79□□□□□ -1
SMC1A-203ENST00000428014 DEKP35659 375 aaKnown RBP8.79□□□□□ -1
SMC1A-203ENST00000428014 IL2P60568 153 aa8.79□□□□□ -1
SMC1A-203ENST00000428014 RPS15P62841 145 aaKnown RBP8.79□□□□□ -1
SMC1A-203ENST00000428014 POU4F1Q01851 419 aa8.79□□□□□ -1
SMC1A-203ENST00000428014 TAP2Q03519 686 aa8.79□□□□□ -1
SMC1A-203ENST00000428014 CDC20Q12834 499 aa8.79□□□□□ -1
SMC1A-203ENST00000428014 DNASE1L3Q13609 305 aa8.79□□□□□ -1
SMC1A-203ENST00000428014 TGIF1Q15583 401 aa8.79□□□□□ -1
SMC1A-203ENST00000428014 ACSBG2Q5FVE4 666 aa8.79□□□□□ -1
SMC1A-203ENST00000428014 ARHGAP40Q5TG30 622 aa8.79□□□□□ -1
SMC1A-203ENST00000428014 ZNF425Q6IV72 752 aa8.79□□□□□ -1
SMC1A-203ENST00000428014 PRMT9Q6P2P2 845 aa8.79□□□□□ -1
SMC1A-203ENST00000428014 BORAQ6PGQ7 559 aa8.79□□□□□ -1
SMC1A-203ENST00000428014 SYT10Q6XYQ8 523 aa8.79□□□□□ -1
SMC1A-203ENST00000428014 RNF44Q7L0R7 432 aa8.79□□□□□ -1
SMC1A-203ENST00000428014 RETREG3Q86VR2 466 aa8.79□□□□□ -1
SMC1A-203ENST00000428014 ZC3HC1Q86WB0 502 aaKnown RBP8.79□□□□□ -1
SMC1A-203ENST00000428014 TMEM126BQ8IUX1 230 aa8.79□□□□□ -1
SMC1A-203ENST00000428014 LRRC56Q8IYG6 542 aaPredicted RBP8.79□□□□□ -1
SMC1A-203ENST00000428014 MMGT1Q8N4V1 131 aa8.79□□□□□ -1
SMC1A-203ENST00000428014 NKAPQ8N5F7 415 aaKnown RBP8.79□□□□□ -1
SMC1A-203ENST00000428014 EIF1ADQ8N9N8 165 aaKnown RBP8.79□□□□□ -1
SMC1A-203ENST00000428014 OR2L3Q8NG85 312 aa8.79□□□□□ -1
SMC1A-203ENST00000428014 GIMAP7Q8NHV1 300 aa8.79□□□□□ -1
SMC1A-203ENST00000428014 PYROXD1Q8WU10 500 aa8.79□□□□□ -1
SMC1A-203ENST00000428014 STARD8Q92502 1023 aa8.79□□□□□ -1
SMC1A-203ENST00000428014 VPS39Q96JC1 886 aa8.79□□□□□ -1
SMC1A-203ENST00000428014 SEC16BQ96JE7 1060 aa8.79□□□□□ -1
SMC1A-203ENST00000428014 SPSB2Q99619 263 aa8.79□□□□□ -1
SMC1A-203ENST00000428014 GPR21Q99679 349 aa8.79□□□□□ -1
SMC1A-203ENST00000428014 USB1Q9BQ65 265 aaKnown RBP8.79□□□□□ -1
SMC1A-203ENST00000428014 WDR83Q9BRX9 315 aaKnown RBP8.79□□□□□ -1
SMC1A-203ENST00000428014 WDR54Q9H977 334 aa8.79□□□□□ -1
SMC1A-203ENST00000428014 ACTR5Q9H9F9 607 aaPredicted RBP8.79□□□□□ -1
SMC1A-203ENST00000428014 PARVBQ9HBI1 364 aa8.79□□□□□ -1
SMC1A-203ENST00000428014 CPNE5Q9HCH3 593 aa8.79□□□□□ -1
SMC1A-203ENST00000428014 PLSCR2Q9NRY7 297 aa8.79□□□□□ -1
SMC1A-203ENST00000428014 GEMIN8Q9NWZ8 242 aaKnown RBP8.79□□□□□ -1
SMC1A-203ENST00000428014 SPHK1Q9NYA1 384 aa8.79□□□□□ -1
SMC1A-203ENST00000428014 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.79□□□□□ -1
SMC1A-203ENST00000428014 FAM8A1Q9UBU6 413 aa8.79□□□□□ -1
SMC1A-203ENST00000428014 NXT1Q9UKK6 140 aaKnown RBP8.79□□□□□ -1
SMC1A-203ENST00000428014 POLHQ9Y253 713 aa8.79□□□□□ -1
SMC1A-203ENST00000428014 CFAP46Q8IYW2 2715 aa8.79□□□□□ -1
SMC1A-203ENST00000428014 PIEZO2Q9H5I5 2752 aa8.78□□□□□ -1
SMC1A-203ENST00000428014 A0A1W2PPV9 198 aa8.78□□□□□ -1
SMC1A-203ENST00000428014 ISM1B1AKI9 464 aa8.78□□□□□ -1
SMC1A-203ENST00000428014 TMEM150CB9EJG8 249 aa8.78□□□□□ -1
SMC1A-203ENST00000428014 GOLGA8KD6RF30 607 aa8.78□□□□□ -1
SMC1A-203ENST00000428014 GOLGA8TH3BQL2 631 aa8.78□□□□□ -1
SMC1A-203ENST00000428014 CREG1O75629 220 aa8.78□□□□□ -1
SMC1A-203ENST00000428014 OR2B3O76000 313 aa8.78□□□□□ -1
SMC1A-203ENST00000428014 TSPAN12O95859 305 aa8.78□□□□□ -1
SMC1A-203ENST00000428014 ZNF37AP17032 561 aaPredicted RBP8.78□□□□□ -1
SMC1A-203ENST00000428014 ZNF28P17035 718 aa8.78□□□□□ -1
SMC1A-203ENST00000428014 TCN2P20062 427 aa8.78□□□□□ -1
SMC1A-203ENST00000428014 GSTM2P28161 218 aa8.78□□□□□ -1
SMC1A-203ENST00000428014 GRIA3P42263 894 aa8.78□□□□□ -1
SMC1A-203ENST00000428014 HNMTP50135 292 aa8.78□□□□□ -1
SMC1A-203ENST00000428014 PNLIPRP1P54315 467 aa8.78□□□□□ -1
SMC1A-203ENST00000428014 SOX8P57073 446 aa8.78□□□□□ -1
SMC1A-203ENST00000428014 TIAL1Q01085 375 aaKnown RBP eCLIP8.78□□□□□ -1
SMC1A-203ENST00000428014 GUCY2DQ02846 1103 aa8.78□□□□□ -1
SMC1A-203ENST00000428014 KCNC4Q03721 635 aa8.78□□□□□ -1
SMC1A-203ENST00000428014 ABRQ12979 859 aa8.78□□□□□ -1
SMC1A-203ENST00000428014 PDIA2Q13087 525 aaKnown RBP8.78□□□□□ -1
SMC1A-203ENST00000428014 GRM7Q14831 915 aa8.78□□□□□ -1
SMC1A-203ENST00000428014 BRD3Q15059 726 aa8.78□□□□□ -1
SMC1A-203ENST00000428014 SF1Q15637 639 aaKnown RBP8.78□□□□□ -1
SMC1A-203ENST00000428014 UGT8Q16880 541 aa8.78□□□□□ -1
SMC1A-203ENST00000428014 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.78□□□□□ -1
SMC1A-203ENST00000428014 NIPAL1Q6NVV3 410 aa8.78□□□□□ -1
SMC1A-203ENST00000428014 CNSTQ6PJW8 725 aa8.78□□□□□ -1
SMC1A-203ENST00000428014 FIGLAQ6QHK4 219 aa8.78□□□□□ -1
SMC1A-203ENST00000428014 PCSK4Q6UW60 755 aa8.78□□□□□ -1
SMC1A-203ENST00000428014 STRA8Q7Z7C7 330 aa8.78□□□□□ -1
SMC1A-203ENST00000428014 IGDCC3Q8IVU1 814 aa8.78□□□□□ -1
SMC1A-203ENST00000428014 PALM2Q8IXS6 379 aa8.78□□□□□ -1
SMC1A-203ENST00000428014 KLHDC8AQ8IYD2 350 aa8.78□□□□□ -1
SMC1A-203ENST00000428014 MYO1HQ8N1T3 1032 aa8.78□□□□□ -1
SMC1A-203ENST00000428014 FBXO36Q8NEA4 188 aa8.78□□□□□ -1
SMC1A-203ENST00000428014 OR1L3Q8NH93 324 aa8.78□□□□□ -1
SMC1A-203ENST00000428014 NAT14Q8WUY8 206 aa8.78□□□□□ -1
SMC1A-203ENST00000428014 APOBEC4Q8WW27 367 aaKnown RBP8.78□□□□□ -1
SMC1A-203ENST00000428014 N4BP2L2Q92802 583 aaPredicted RBP8.78□□□□□ -1
SMC1A-203ENST00000428014 TSPAN17Q96FV3 270 aa8.78□□□□□ -1
SMC1A-203ENST00000428014 NAF1Q96HR8 494 aaKnown RBP8.78□□□□□ -1
SMC1A-203ENST00000428014 VPS50Q96JG6 964 aa8.78□□□□□ -1
SMC1A-203ENST00000428014 GBP5Q96PP8 586 aa8.78□□□□□ -1
SMC1A-203ENST00000428014 CPNE1Q99829 537 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms