RNA–Protein interactions for RNA: ENST00000427755.2

DEPDC7-203, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,212 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-203ENST00000427755 GBX1Q14549 363 aa12.49□□□□□ -0.41
DEPDC7-203ENST00000427755 CCNG2Q16589 344 aa12.49□□□□□ -0.41
DEPDC7-203ENST00000427755 MEI1Q5TIA1 1274 aa12.49□□□□□ -0.41
DEPDC7-203ENST00000427755 FRMPD2BQ6IN97 320 aa12.49□□□□□ -0.41
DEPDC7-203ENST00000427755 DRICH1Q6PGQ1 229 aaPredicted RBP12.49□□□□□ -0.41
DEPDC7-203ENST00000427755 SHISA6Q6ZSJ9 500 aa12.49□□□□□ -0.41
DEPDC7-203ENST00000427755 LRRC6Q86X45 466 aa12.49□□□□□ -0.41
DEPDC7-203ENST00000427755 METTL27Q8N6F8 245 aaPredicted RBP12.49□□□□□ -0.41
DEPDC7-203ENST00000427755 OR2L3Q8NG85 312 aa12.49□□□□□ -0.41
DEPDC7-203ENST00000427755 PPP4R1Q8TF05 950 aa12.49□□□□□ -0.41
DEPDC7-203ENST00000427755 UBE2Q2Q8WVN8 375 aa12.49□□□□□ -0.41
DEPDC7-203ENST00000427755 RAD51AP1Q96B01 352 aa12.49□□□□□ -0.41
DEPDC7-203ENST00000427755 MIPEPQ99797 713 aa12.49□□□□□ -0.41
DEPDC7-203ENST00000427755 WDR77Q9BQA1 342 aaPredicted RBP12.49□□□□□ -0.41
DEPDC7-203ENST00000427755 MESP1Q9BRJ9 268 aa12.49□□□□□ -0.41
DEPDC7-203ENST00000427755 SOX17Q9H6I2 414 aaPredicted RBP12.49□□□□□ -0.41
DEPDC7-203ENST00000427755 MRM3Q9HC36 420 aaKnown RBP12.49□□□□□ -0.41
DEPDC7-203ENST00000427755 CDC23Q9UJX2 597 aa12.49□□□□□ -0.41
DEPDC7-203ENST00000427755 NXT1Q9UKK6 140 aaKnown RBP12.49□□□□□ -0.41
DEPDC7-203ENST00000427755 TTC7AQ9ULT0 858 aaPredicted RBP12.49□□□□□ -0.41
DEPDC7-203ENST00000427755 GUCA1BQ9UMX6 200 aa12.49□□□□□ -0.41
DEPDC7-203ENST00000427755 NOTCH2Q04721 2471 aa12.49□□□□□ -0.41
DEPDC7-203ENST00000427755 LOC105369274A0A096LPK9 316 aa12.48□□□□□ -0.41
DEPDC7-203ENST00000427755 LOC102723532A0A0G2JNH3 316 aa12.48□□□□□ -0.41
DEPDC7-203ENST00000427755 ANKUB1A6NFN9 424 aa12.48□□□□□ -0.41
DEPDC7-203ENST00000427755 SRPX2O60687 465 aaPredicted RBP12.48□□□□□ -0.41
DEPDC7-203ENST00000427755 CLDN1O95832 211 aa12.48□□□□□ -0.41
DEPDC7-203ENST00000427755 VSX2P58304 361 aaPredicted RBP12.48□□□□□ -0.41
DEPDC7-203ENST00000427755 YBX1P67809 324 aaKnown RBP12.48□□□□□ -0.41
DEPDC7-203ENST00000427755 Q0VFX4 171 aa12.48□□□□□ -0.41
DEPDC7-203ENST00000427755 FASTKQ14296 549 aaKnown RBP12.48□□□□□ -0.41
DEPDC7-203ENST00000427755 HIF1AQ16665 826 aa12.48□□□□□ -0.41
DEPDC7-203ENST00000427755 KCTD19Q17RG1 926 aaPredicted RBP12.48□□□□□ -0.41
DEPDC7-203ENST00000427755 WASHC2DQ5SRD0 308 aa12.48□□□□□ -0.41
DEPDC7-203ENST00000427755 TTC23LQ6PF05 361 aa12.48□□□□□ -0.41
DEPDC7-203ENST00000427755 RNF44Q7L0R7 432 aa12.48□□□□□ -0.41
DEPDC7-203ENST00000427755 OTOAQ7RTW8 1153 aa12.48□□□□□ -0.41
DEPDC7-203ENST00000427755 OR4N4Q8N0Y3 316 aa12.48□□□□□ -0.41
DEPDC7-203ENST00000427755 TTC29Q8NA56 475 aaPredicted RBP12.48□□□□□ -0.41
DEPDC7-203ENST00000427755 SPC24Q8NBT2 197 aa12.48□□□□□ -0.41
DEPDC7-203ENST00000427755 OR11G2Q8NGC1 345 aa12.48□□□□□ -0.41
DEPDC7-203ENST00000427755 OR2A1Q8NGT9 310 aa12.48□□□□□ -0.41
DEPDC7-203ENST00000427755 LPGAT1Q92604 370 aa12.48□□□□□ -0.41
DEPDC7-203ENST00000427755 MFSD3Q96ES6 412 aa12.48□□□□□ -0.41
DEPDC7-203ENST00000427755 KIFC1Q9BW19 673 aa12.48□□□□□ -0.41
DEPDC7-203ENST00000427755 TSGA10Q9BZW7 698 aa12.48□□□□□ -0.41
DEPDC7-203ENST00000427755 IL22Q9GZX6 179 aa12.48□□□□□ -0.41
DEPDC7-203ENST00000427755 SEMA3GQ9NS98 782 aa12.48□□□□□ -0.41
DEPDC7-203ENST00000427755 IL1RAPL1Q9NZN1 696 aa12.48□□□□□ -0.41
DEPDC7-203ENST00000427755 NOVA2Q9UNW9 492 aaKnown RBP12.48□□□□□ -0.41
DEPDC7-203ENST00000427755 DRG1Q9Y295 367 aaKnown RBP12.48□□□□□ -0.41
DEPDC7-203ENST00000427755 COPG1Q9Y678 874 aaKnown RBP12.48□□□□□ -0.41
DEPDC7-203ENST00000427755 MAU2Q9Y6X3 613 aa12.48□□□□□ -0.41
DEPDC7-203ENST00000427755 ESPL1Q14674 2120 aa12.47□□□□□ -0.41
DEPDC7-203ENST00000427755 PIKFYVEQ9Y2I7 2098 aa12.47□□□□□ -0.41
DEPDC7-203ENST00000427755 UNC79Q9P2D8 2635 aa12.47□□□□□ -0.41
DEPDC7-203ENST00000427755 A0A0J9YVX5 310 aa12.47□□□□□ -0.41
DEPDC7-203ENST00000427755 HYKKA2RU49 373 aa12.47□□□□□ -0.41
DEPDC7-203ENST00000427755 OR2A25A4D2G3 310 aa12.47□□□□□ -0.41
DEPDC7-203ENST00000427755 KPNA5O15131 536 aa12.47□□□□□ -0.41
DEPDC7-203ENST00000427755 NDUFS3O75489 264 aa12.47□□□□□ -0.41
DEPDC7-203ENST00000427755 VAPBO95292 243 aa12.47□□□□□ -0.41
DEPDC7-203ENST00000427755 MATN4O95460 622 aa12.47□□□□□ -0.41
DEPDC7-203ENST00000427755 ERGP11308 486 aa12.47□□□□□ -0.41
DEPDC7-203ENST00000427755 MGAT1P26572 445 aa12.47□□□□□ -0.41
DEPDC7-203ENST00000427755 CCNFP41002 786 aa12.47□□□□□ -0.41
DEPDC7-203ENST00000427755 GLRBP48167 497 aa12.47□□□□□ -0.41
DEPDC7-203ENST00000427755 NPY2RP49146 381 aa12.47□□□□□ -0.41
DEPDC7-203ENST00000427755 EIF3BP55884 814 aaKnown RBP12.47□□□□□ -0.41
DEPDC7-203ENST00000427755 BASP1P80723 227 aaKnown RBP12.47□□□□□ -0.41
DEPDC7-203ENST00000427755 RPS6KA1Q15418 735 aa12.47□□□□□ -0.41
DEPDC7-203ENST00000427755 TYSND1Q2T9J0 566 aa12.47□□□□□ -0.41
DEPDC7-203ENST00000427755 FAM214AQ32MH5 1076 aa12.47□□□□□ -0.41
DEPDC7-203ENST00000427755 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.47□□□□□ -0.41
DEPDC7-203ENST00000427755 AGAP7PQ5VUJ5 663 aa12.47□□□□□ -0.41
DEPDC7-203ENST00000427755 CNSTQ6PJW8 725 aa12.47□□□□□ -0.41
DEPDC7-203ENST00000427755 CES3Q6UWW8 571 aa12.47□□□□□ -0.41
DEPDC7-203ENST00000427755 MAMDC2Q7Z304 686 aaPredicted RBP12.47□□□□□ -0.41
DEPDC7-203ENST00000427755 GSDMBQ8TAX9 411 aa12.47□□□□□ -0.41
DEPDC7-203ENST00000427755 SKA2Q8WVK7 121 aaPredicted RBP12.47□□□□□ -0.41
DEPDC7-203ENST00000427755 C10orf90Q96M02 699 aa12.47□□□□□ -0.41
DEPDC7-203ENST00000427755 AGAP4Q96P64 663 aa12.47□□□□□ -0.41
DEPDC7-203ENST00000427755 SYNPO2LQ9H987 977 aa12.47□□□□□ -0.41
DEPDC7-203ENST00000427755 SYBUQ9NX95 663 aa12.47□□□□□ -0.41
DEPDC7-203ENST00000427755 BFARQ9NZS9 450 aa12.47□□□□□ -0.41
DEPDC7-203ENST00000427755 SPATA7Q9P0W8 599 aa12.47□□□□□ -0.41
DEPDC7-203ENST00000427755 SLC5A6Q9Y289 635 aa12.47□□□□□ -0.41
DEPDC7-203ENST00000427755 MRFAP1Q9Y605 127 aa12.47□□□□□ -0.41
DEPDC7-203ENST00000427755 IGLV3-12A0A075B6K2 115 aa12.46□□□□□ -0.41
DEPDC7-203ENST00000427755 TCRBV7S3A2A0A539 114 aa12.46□□□□□ -0.41
DEPDC7-203ENST00000427755 GOLGA8KD6RF30 607 aa12.46□□□□□ -0.41
DEPDC7-203ENST00000427755 GOLGA8TH3BQL2 631 aa12.46□□□□□ -0.41
DEPDC7-203ENST00000427755 E2F3O00716 465 aa12.46□□□□□ -0.41
DEPDC7-203ENST00000427755 NIPSNAP2O75323 286 aa12.46□□□□□ -0.41
DEPDC7-203ENST00000427755 COL8A1P27658 744 aa12.46□□□□□ -0.41
DEPDC7-203ENST00000427755 ATP5DP30049 168 aa12.46□□□□□ -0.41
DEPDC7-203ENST00000427755 FMO4P31512 558 aa12.46□□□□□ -0.41
DEPDC7-203ENST00000427755 KCNJ1P48048 391 aa12.46□□□□□ -0.41
DEPDC7-203ENST00000427755 ADARP55265 1226 aaKnown RBP12.46□□□□□ -0.41
DEPDC7-203ENST00000427755 KLC1Q07866 573 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms