RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 STT3AP46977 705 aa10.4□□□□□ -0.74
TCOF1-204ENST00000427724 HCAR3P49019 387 aa10.4□□□□□ -0.74
TCOF1-204ENST00000427724 PGDP52209 483 aa10.4□□□□□ -0.74
TCOF1-204ENST00000427724 SIM1P81133 766 aaPredicted RBP10.4□□□□□ -0.74
TCOF1-204ENST00000427724 ADGRG2Q8IZP9 1017 aa10.4□□□□□ -0.74
TCOF1-204ENST00000427724 OXR1Q8N573 874 aa10.4□□□□□ -0.74
TCOF1-204ENST00000427724 SMYD1Q8NB12 490 aa10.4□□□□□ -0.74
TCOF1-204ENST00000427724 SRFBP1Q8NEF9 429 aaKnown RBP10.4□□□□□ -0.74
TCOF1-204ENST00000427724 ZFP28Q8NHY6 868 aa10.4□□□□□ -0.74
TCOF1-204ENST00000427724 PSKH2Q96QS6 385 aa10.4□□□□□ -0.74
TCOF1-204ENST00000427724 HBEGFQ99075 208 aa10.4□□□□□ -0.74
TCOF1-204ENST00000427724 C1orf21Q9H246 121 aa10.4□□□□□ -0.74
TCOF1-204ENST00000427724 CXorf21Q9HAI6 301 aa10.4□□□□□ -0.74
TCOF1-204ENST00000427724 EIF2B3Q9NR50 452 aaKnown RBP10.4□□□□□ -0.74
TCOF1-204ENST00000427724 ACTL7AQ9Y615 435 aa10.4□□□□□ -0.74
TCOF1-204ENST00000427724 ZNF780BQ9Y6R6 833 aa10.4□□□□□ -0.74
TCOF1-204ENST00000427724 CCDC154A6NI56 674 aa10.4□□□□□ -0.75
TCOF1-204ENST00000427724 RGS14O43566 566 aa10.4□□□□□ -0.75
TCOF1-204ENST00000427724 S100A1P23297 94 aa10.4□□□□□ -0.75
TCOF1-204ENST00000427724 HLA-FP30511 346 aa10.4□□□□□ -0.75
TCOF1-204ENST00000427724 HSPA7P48741 367 aa10.4□□□□□ -0.75
TCOF1-204ENST00000427724 ACAP2Q15057 778 aa10.4□□□□□ -0.75
TCOF1-204ENST00000427724 CMPK2Q5EBM0 449 aa10.4□□□□□ -0.75
TCOF1-204ENST00000427724 TP53INP2Q8IXH6 220 aa10.4□□□□□ -0.75
TCOF1-204ENST00000427724 TMEM174Q8WUU8 243 aa10.4□□□□□ -0.75
TCOF1-204ENST00000427724 GDF15Q99988 308 aa10.4□□□□□ -0.75
TCOF1-204ENST00000427724 SLC6A17Q9H1V8 727 aa10.4□□□□□ -0.75
TCOF1-204ENST00000427724 ANKHQ9HCJ1 492 aa10.4□□□□□ -0.75
TCOF1-204ENST00000427724 ZDHHC2Q9UIJ5 367 aa10.4□□□□□ -0.75
TCOF1-204ENST00000427724 ADAMTS6Q9UKP5 1117 aa10.4□□□□□ -0.75
TCOF1-204ENST00000427724 ZNF232Q9UNY5 417 aa10.4□□□□□ -0.75
TCOF1-204ENST00000427724 MTCH2Q9Y6C9 303 aa10.4□□□□□ -0.75
TCOF1-204ENST00000427724 ANKRD12Q6UB98 2062 aa10.4□□□□□ -0.75
TCOF1-204ENST00000427724 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.39□□□□□ -0.75
TCOF1-204ENST00000427724 KRT33AO76009 404 aa10.39□□□□□ -0.75
TCOF1-204ENST00000427724 ADGRE1Q14246 886 aa10.39□□□□□ -0.75
TCOF1-204ENST00000427724 TMEM156Q8N614 296 aa10.39□□□□□ -0.75
TCOF1-204ENST00000427724 BPIFB6Q8NFQ5 453 aa10.39□□□□□ -0.75
TCOF1-204ENST00000427724 BTN2A2Q8WVV5 523 aa10.39□□□□□ -0.75
TCOF1-204ENST00000427724 ZDHHC12Q96GR4 267 aa10.39□□□□□ -0.75
TCOF1-204ENST00000427724 OXSMQ9NWU1 459 aa10.39□□□□□ -0.75
TCOF1-204ENST00000427724 CAB39Q9Y376 341 aaPredicted RBP10.39□□□□□ -0.75
TCOF1-204ENST00000427724 MTF2Q9Y483 593 aaPredicted RBP10.39□□□□□ -0.75
TCOF1-204ENST00000427724 TIMM22Q9Y584 194 aa10.39□□□□□ -0.75
TCOF1-204ENST00000427724 DGKBQ9Y6T7 804 aa10.39□□□□□ -0.75
TCOF1-204ENST00000427724 NIPSNAP2O75323 286 aa10.39□□□□□ -0.75
TCOF1-204ENST00000427724 IPO13O94829 963 aaKnown RBP10.39□□□□□ -0.75
TCOF1-204ENST00000427724 MATN4O95460 622 aa10.39□□□□□ -0.75
TCOF1-204ENST00000427724 ESR1P03372 595 aa10.39□□□□□ -0.75
TCOF1-204ENST00000427724 GSTM1P09488 218 aa10.39□□□□□ -0.75
TCOF1-204ENST00000427724 RABIFP47224 123 aa10.39□□□□□ -0.75
TCOF1-204ENST00000427724 NOVA1P51513 510 aaKnown RBP10.39□□□□□ -0.75
TCOF1-204ENST00000427724 SRSF11Q05519 484 aaKnown RBP10.39□□□□□ -0.75
TCOF1-204ENST00000427724 C9orf64Q5T6V5 341 aa10.39□□□□□ -0.75
TCOF1-204ENST00000427724 RPS27LQ71UM5 84 aaKnown RBP10.39□□□□□ -0.75
TCOF1-204ENST00000427724 FAM160A2Q8N612 972 aaPredicted RBP10.39□□□□□ -0.75
TCOF1-204ENST00000427724 METTL27Q8N6F8 245 aaPredicted RBP10.39□□□□□ -0.75
TCOF1-204ENST00000427724 PPP1R14BQ96C90 147 aa10.39□□□□□ -0.75
TCOF1-204ENST00000427724 DHRS4Q9BTZ2 278 aa10.39□□□□□ -0.75
TCOF1-204ENST00000427724 C9orf16Q9BUW7 83 aa10.39□□□□□ -0.75
TCOF1-204ENST00000427724 ARRDC1-AS1Q9H2J1 176 aa10.39□□□□□ -0.75
TCOF1-204ENST00000427724 HCN3Q9P1Z3 774 aa10.39□□□□□ -0.75
TCOF1-204ENST00000427724 DHRS12A0PJE2 317 aa10.39□□□□□ -0.75
TCOF1-204ENST00000427724 SCN2BO60939 215 aa10.39□□□□□ -0.75
TCOF1-204ENST00000427724 LRATO95237 230 aa10.39□□□□□ -0.75
TCOF1-204ENST00000427724 COPZ1P61923 177 aa10.39□□□□□ -0.75
TCOF1-204ENST00000427724 BNIP3Q12983 259 aa10.39□□□□□ -0.75
TCOF1-204ENST00000427724 DGCR6Q14129 220 aa10.39□□□□□ -0.75
TCOF1-204ENST00000427724 TIFABQ6ZNK6 161 aa10.39□□□□□ -0.75
TCOF1-204ENST00000427724 ERI1Q8IV48 349 aaKnown RBP10.39□□□□□ -0.75
TCOF1-204ENST00000427724 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.39□□□□□ -0.75
TCOF1-204ENST00000427724 ELSPBP1Q96BH3 223 aa10.39□□□□□ -0.75
TCOF1-204ENST00000427724 FAM120BQ96EK7 910 aaKnown RBP10.39□□□□□ -0.75
TCOF1-204ENST00000427724 SLC2A13Q96QE2 648 aa10.39□□□□□ -0.75
TCOF1-204ENST00000427724 MCMBPQ9BTE3 642 aa10.39□□□□□ -0.75
TCOF1-204ENST00000427724 ABCB10Q9NRK6 738 aa10.39□□□□□ -0.75
TCOF1-204ENST00000427724 SEC16AO15027 2179 aa10.39□□□□□ -0.75
TCOF1-204ENST00000427724 NARSO43776 548 aaKnown RBP10.38□□□□□ -0.75
TCOF1-204ENST00000427724 PGLSO95336 258 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 UMPSP11172 480 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 ATP1B2P14415 290 aaPredicted RBP10.38□□□□□ -0.75
TCOF1-204ENST00000427724 CKMT2P17540 419 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 PSMB9P28065 219 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 PRDX6P30041 224 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 PDCD4Q53EL6 469 aaKnown RBP10.38□□□□□ -0.75
TCOF1-204ENST00000427724 TMEM53Q6P2H8 277 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 ZNF783Q6ZMS7 281 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 SPPL2CQ8IUH8 684 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 MCEMP1Q8IX19 187 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 FCRL3Q96P31 734 aaPredicted RBP10.38□□□□□ -0.75
TCOF1-204ENST00000427724 CCM2Q9BSQ5 444 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 RAD21L1Q9H4I0 556 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 COQ10BQ9H8M1 238 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 EQTNQ9NQ60 294 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 MOCS1Q9NZB8 636 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 PISDQ9UG56 409 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 A0A0J9YYE9 177 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 A0A1B0GTW7 788 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 AZIN1O14977 448 aa10.38□□□□□ -0.75
TCOF1-204ENST00000427724 DNAJA2O60884 412 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms