RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 GTPBP3Q969Y2 492 aaKnown RBP5.61□□□□□ -1.51
HERC4-206ENST00000427635 TP53INP1Q96A56 240 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 ZSCAN5AQ9BUG6 496 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 IFT27Q9BW83 186 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 CDC42EP4Q9H3Q1 356 aaKnown RBP5.61□□□□□ -1.51
HERC4-206ENST00000427635 BRD7Q9NPI1 651 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 PCYOX1Q9UHG3 505 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 AZIN1O14977 448 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 AREL1O15033 823 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 DHX15O43143 795 aaKnown RBP5.61□□□□□ -1.51
HERC4-206ENST00000427635 C9P02748 559 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 ALADP13716 330 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 PCSK2P16519 638 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 GLP1RP43220 463 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 GSCP56915 257 aaPredicted RBP5.61□□□□□ -1.51
HERC4-206ENST00000427635 DDR1Q08345 913 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 ARFRP1Q13795 201 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 MED22Q15528 200 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 ERN2Q76MJ5 926 aaKnown RBP5.61□□□□□ -1.51
HERC4-206ENST00000427635 PIGWQ7Z7B1 504 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 SPARTQ8N0X7 666 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 KIF2BQ8N4N8 673 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 ZNF454Q8N9F8 522 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 ACTRT1Q8TDG2 376 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 ASB15Q8WXK1 588 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 ZNF700Q9H0M5 742 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 C3orf18Q9UK00 162 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 CNOT6Q9ULM6 557 aaKnown RBP5.61□□□□□ -1.51
HERC4-206ENST00000427635 NOSIPQ9Y314 301 aaKnown RBP5.61□□□□□ -1.51
HERC4-206ENST00000427635 IQGAP3Q86VI3 1631 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 GNB5O14775 395 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 NRP1O14786 923 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 HCKP08631 526 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 PREPP48147 710 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 NUBP1P53384 320 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 PLA2G16P53816 162 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 OR4D2P58180 307 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 HNRNPKP61978 463 aaKnown RBP eCLIP5.61□□□□□ -1.51
HERC4-206ENST00000427635 SCN1BQ07699 218 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 GTF2H2Q13888 395 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 C5orf22Q49AR2 442 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 GTF2H2CQ6P1K8 395 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 USP53Q70EK8 1073 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 TMC3Q7Z5M5 1100 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 PLXDC1Q8IUK5 500 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.61□□□□□ -1.51
HERC4-206ENST00000427635 NATD1Q8N6N6 113 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 OR5L2Q8NGL0 311 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 TRMT2BQ96GJ1 504 aaKnown RBP5.61□□□□□ -1.51
HERC4-206ENST00000427635 CCT8L2Q96SF2 557 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 GMLQ99445 158 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 LPIN3Q9BQK8 851 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 CADM1Q9BY67 442 aaKnown RBP5.61□□□□□ -1.51
HERC4-206ENST00000427635 DYNLRB1Q9NP97 96 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 FZD3Q9NPG1 666 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 WBP11Q9Y2W2 641 aaKnown RBP5.61□□□□□ -1.51
HERC4-206ENST00000427635 A6NL46 340 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 OR5K4A6NMS3 321 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 BTN3A3O00478 584 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 ARPC2O15144 300 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 CNTN5O94779 1100 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 IPO13O94829 963 aaKnown RBP5.61□□□□□ -1.51
HERC4-206ENST00000427635 AHSA1O95433 338 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 EIF4EP06730 217 aaKnown RBP5.61□□□□□ -1.51
HERC4-206ENST00000427635 PRKACBP22694 351 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 TNFSF9P41273 254 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 NSG1P42857 185 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 GRIA4P48058 902 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 CCT3P49368 545 aaKnown RBP5.61□□□□□ -1.51
HERC4-206ENST00000427635 HERV-K104P61576 105 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 MTF1Q14872 753 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 TAF1AQ15573 450 aaPredicted RBP5.61□□□□□ -1.51
HERC4-206ENST00000427635 ZCWPW2Q504Y3 356 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 PERM1Q5SV97 790 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 UBAP2Q5T6F2 1119 aaKnown RBP5.61□□□□□ -1.51
HERC4-206ENST00000427635 RAET1LQ5VY80 246 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 PET117Q6UWS5 81 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 LSMEM1Q8N8F7 131 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 ZNF615Q8N8J6 731 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 ZNF709Q8N972 641 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 BPIFB6Q8NFQ5 453 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 GRHL3Q8TE85 626 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 SPRYD4Q8WW59 207 aaPredicted RBP5.61□□□□□ -1.51
HERC4-206ENST00000427635 FAM3CQ92520 227 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 ANKRD7Q92527 254 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 RPL10LQ96L21 214 aaKnown RBP5.61□□□□□ -1.51
HERC4-206ENST00000427635 MIPEPQ99797 713 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 GORASP1Q9BQQ3 440 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 SLC5A7Q9GZV3 580 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 SAGE1Q9NXZ1 904 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 CIDEBQ9UHD4 219 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 HAO1Q9UJM8 370 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 STOML2Q9UJZ1 356 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 TBC1D24Q9ULP9 559 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 YIPF1Q9Y548 306 aa5.61□□□□□ -1.51
HERC4-206ENST00000427635 PTPRUQ92729 1446 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 ENO4A6NNW6 628 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 FADS2P1A8MWK0 482 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 AKAP3O75969 853 aa5.6□□□□□ -1.51
HERC4-206ENST00000427635 JUNDP17535 347 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms