RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 LRRN3Q9H3W5 708 aa14.13□□□□□ -0.15
PTPN13-203ENST00000427191 NLGN3Q9NZ94 848 aa14.13□□□□□ -0.15
PTPN13-203ENST00000427191 C2orf71A6NGG8 1288 aa14.13□□□□□ -0.15
PTPN13-203ENST00000427191 TP73O15350 636 aa14.13□□□□□ -0.15
PTPN13-203ENST00000427191 HRGP04196 525 aa14.13□□□□□ -0.15
PTPN13-203ENST00000427191 H1F0P07305 194 aaKnown RBP14.13□□□□□ -0.15
PTPN13-203ENST00000427191 SLC6A9P48067 706 aa14.13□□□□□ -0.15
PTPN13-203ENST00000427191 GLUD2P49448 558 aa14.13□□□□□ -0.15
PTPN13-203ENST00000427191 NCEH1Q6PIU2 408 aa14.13□□□□□ -0.15
PTPN13-203ENST00000427191 GPR151Q8TDV0 419 aa14.13□□□□□ -0.15
PTPN13-203ENST00000427191 FUZQ9BT04 418 aa14.13□□□□□ -0.15
PTPN13-203ENST00000427191 ASPNQ9BXN1 380 aa14.13□□□□□ -0.15
PTPN13-203ENST00000427191 TAS2R10Q9NYW0 307 aa14.13□□□□□ -0.15
PTPN13-203ENST00000427191 UBIAD1Q9Y5Z9 338 aa14.13□□□□□ -0.15
PTPN13-203ENST00000427191 CEP170BQ9Y4F5 1589 aaPredicted RBP14.13□□□□□ -0.15
PTPN13-203ENST00000427191 OR2T5Q6IEZ7 315 aa14.13□□□□□ -0.15
PTPN13-203ENST00000427191 ZNF101Q8IZC7 436 aa14.13□□□□□ -0.15
PTPN13-203ENST00000427191 OR2T29Q8NH02 315 aa14.13□□□□□ -0.15
PTPN13-203ENST00000427191 C1orf21Q9H246 121 aa14.13□□□□□ -0.15
PTPN13-203ENST00000427191 PACSIN3Q9UKS6 424 aa14.13□□□□□ -0.15
PTPN13-203ENST00000427191 CNTNAP1P78357 1384 aa14.13□□□□□ -0.15
PTPN13-203ENST00000427191 FXYD6-FXYD2A0A087WZ82 144 aa14.13□□□□□ -0.15
PTPN13-203ENST00000427191 HTR3EA5X5Y0 456 aa14.13□□□□□ -0.15
PTPN13-203ENST00000427191 HOXB9P17482 250 aaPredicted RBP14.13□□□□□ -0.15
PTPN13-203ENST00000427191 MCCD1P59942 119 aaPredicted RBP14.13□□□□□ -0.15
PTPN13-203ENST00000427191 RALGPS1Q5JS13 557 aa14.13□□□□□ -0.15
PTPN13-203ENST00000427191 MEDAGQ5VYS4 303 aa14.13□□□□□ -0.15
PTPN13-203ENST00000427191 MON1BQ7L1V2 547 aa14.13□□□□□ -0.15
PTPN13-203ENST00000427191 FXYD6Q9H0Q3 95 aa14.13□□□□□ -0.15
PTPN13-203ENST00000427191 COPZ2Q9P299 210 aa14.13□□□□□ -0.15
PTPN13-203ENST00000427191 SOX30O94993 753 aa14.13□□□□□ -0.15
PTPN13-203ENST00000427191 PLGP00747 810 aaPredicted RBP14.13□□□□□ -0.15
PTPN13-203ENST00000427191 ERCC1P07992 297 aaPredicted RBP14.13□□□□□ -0.15
PTPN13-203ENST00000427191 NCK1P16333 377 aa14.13□□□□□ -0.15
PTPN13-203ENST00000427191 PTPRAP18433 802 aa14.13□□□□□ -0.15
PTPN13-203ENST00000427191 BMP8BP34820 402 aa14.13□□□□□ -0.15
PTPN13-203ENST00000427191 MOGQ16653 247 aa14.13□□□□□ -0.15
PTPN13-203ENST00000427191 SPIN3Q5JUX0 258 aa14.13□□□□□ -0.15
PTPN13-203ENST00000427191 BMP8AQ7Z5Y6 402 aa14.13□□□□□ -0.15
PTPN13-203ENST00000427191 OR56A1Q8NGH5 318 aa14.13□□□□□ -0.15
PTPN13-203ENST00000427191 TM9SF2Q99805 663 aa14.13□□□□□ -0.15
PTPN13-203ENST00000427191 WDR55Q9H6Y2 383 aaPredicted RBP14.13□□□□□ -0.15
PTPN13-203ENST00000427191 PTPRJQ12913 1337 aa14.13□□□□□ -0.15
PTPN13-203ENST00000427191 NOTOA8MTQ0 251 aa14.13□□□□□ -0.15
PTPN13-203ENST00000427191 BUD23O43709 281 aaKnown RBP14.13□□□□□ -0.15
PTPN13-203ENST00000427191 SPARCP09486 303 aa14.13□□□□□ -0.15
PTPN13-203ENST00000427191 NCBP2P52298 156 aaKnown RBP eCLIP14.13□□□□□ -0.15
PTPN13-203ENST00000427191 ERVK-21P61565 698 aa14.13□□□□□ -0.15
PTPN13-203ENST00000427191 GPR33Q49SQ1 333 aa14.13□□□□□ -0.15
PTPN13-203ENST00000427191 OGFOD2Q6N063 350 aa14.13□□□□□ -0.15
PTPN13-203ENST00000427191 AADACL2Q6P093 401 aa14.13□□□□□ -0.15
PTPN13-203ENST00000427191 FITM2Q8N6M3 262 aa14.13□□□□□ -0.15
PTPN13-203ENST00000427191 PBDC1Q9BVG4 233 aa14.13□□□□□ -0.15
PTPN13-203ENST00000427191 RNF208Q9H0X6 261 aa14.13□□□□□ -0.15
PTPN13-203ENST00000427191 SDCBP2Q9H190 292 aa14.13□□□□□ -0.15
PTPN13-203ENST00000427191 SRMSQ9H3Y6 488 aa14.13□□□□□ -0.15
PTPN13-203ENST00000427191 PIK3C2BO00750 1634 aa14.13□□□□□ -0.15
PTPN13-203ENST00000427191 A0A1W2PQ45 241 aaPredicted RBP14.13□□□□□ -0.15
PTPN13-203ENST00000427191 A0A1W2PQY0 241 aa14.13□□□□□ -0.15
PTPN13-203ENST00000427191 NELFEP18615 380 aaKnown RBP14.13□□□□□ -0.15
PTPN13-203ENST00000427191 HADHBP55084 474 aaKnown RBP14.13□□□□□ -0.15
PTPN13-203ENST00000427191 MINDY4Q4G0A6 757 aa14.13□□□□□ -0.15
PTPN13-203ENST00000427191 CYP2U1Q7Z449 544 aa14.13□□□□□ -0.15
PTPN13-203ENST00000427191 LRRN4CLQ8ND94 238 aa14.13□□□□□ -0.15
PTPN13-203ENST00000427191 CYP2W1Q8TAV3 490 aa14.13□□□□□ -0.15
PTPN13-203ENST00000427191 IRF2BPLQ9H1B7 796 aa14.13□□□□□ -0.15
PTPN13-203ENST00000427191 IFT52Q9Y366 437 aa14.13□□□□□ -0.15
PTPN13-203ENST00000427191 MT-ND2P03891 347 aa14.12□□□□□ -0.15
PTPN13-203ENST00000427191 MAGP20916 626 aa14.12□□□□□ -0.15
PTPN13-203ENST00000427191 MSR1P21757 451 aa14.12□□□□□ -0.15
PTPN13-203ENST00000427191 ALAS2P22557 587 aa14.12□□□□□ -0.15
PTPN13-203ENST00000427191 UNQ6126/PRO20091Q6UXV3 157 aa14.12□□□□□ -0.15
PTPN13-203ENST00000427191 PLD5Q8N7P1 536 aa14.12□□□□□ -0.15
PTPN13-203ENST00000427191 COL21A1Q96P44 957 aa14.12□□□□□ -0.15
PTPN13-203ENST00000427191 C12orf65Q9H3J6 166 aaKnown RBP14.12□□□□□ -0.15
PTPN13-203ENST00000427191 MYH1P12882 1939 aa14.12□□□□□ -0.15
PTPN13-203ENST00000427191 MYH2Q9UKX2 1941 aa14.12□□□□□ -0.15
PTPN13-203ENST00000427191 MYH4Q9Y623 1939 aa14.12□□□□□ -0.15
PTPN13-203ENST00000427191 DEPDC5O75140 1603 aa14.12□□□□□ -0.15
PTPN13-203ENST00000427191 PREX1Q8TCU6 1659 aa14.12□□□□□ -0.15
PTPN13-203ENST00000427191 NPIPA5E9PKD4 350 aa14.12□□□□□ -0.15
PTPN13-203ENST00000427191 EIF1AYO14602 144 aaKnown RBP14.12□□□□□ -0.15
PTPN13-203ENST00000427191 BANF1O75531 89 aa14.12□□□□□ -0.15
PTPN13-203ENST00000427191 MT-ND5P03915 603 aa14.12□□□□□ -0.15
PTPN13-203ENST00000427191 C7P10643 843 aa14.12□□□□□ -0.15
PTPN13-203ENST00000427191 CPN2P22792 545 aa14.12□□□□□ -0.15
PTPN13-203ENST00000427191 RORAP35398 523 aa14.12□□□□□ -0.15
PTPN13-203ENST00000427191 EIF1AXP47813 144 aaKnown RBP14.12□□□□□ -0.15
PTPN13-203ENST00000427191 C7orf61Q8IZ16 206 aa14.12□□□□□ -0.15
PTPN13-203ENST00000427191 YIPF7Q8N8F6 280 aa14.12□□□□□ -0.15
PTPN13-203ENST00000427191 SLC37A3Q8NCC5 494 aa14.12□□□□□ -0.15
PTPN13-203ENST00000427191 LMLNQ96KR4 655 aa14.12□□□□□ -0.15
PTPN13-203ENST00000427191 OR2B2Q9GZK3 357 aa14.12□□□□□ -0.15
PTPN13-203ENST00000427191 NPIPA1Q9UND3 350 aa14.12□□□□□ -0.15
PTPN13-203ENST00000427191 EXOSC1Q9Y3B2 195 aaKnown RBP14.12□□□□□ -0.15
PTPN13-203ENST00000427191 PTPRMP28827 1452 aa14.12□□□□□ -0.15
PTPN13-203ENST00000427191 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.12□□□□□ -0.15
PTPN13-203ENST00000427191 SCGB2B2Q4G0G5 96 aa14.12□□□□□ -0.15
PTPN13-203ENST00000427191 DMRTB1Q96MA1 342 aa14.12□□□□□ -0.15
PTPN13-203ENST00000427191 CD180Q99467 661 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms