RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 PON2Q15165 354 aa13.03□□□□□ -0.32
USP42-203ENST00000426246 ZFAND4Q86XD8 727 aa13.03□□□□□ -0.32
USP42-203ENST00000426246 PHYKPLQ8IUZ5 450 aa13.03□□□□□ -0.32
USP42-203ENST00000426246 ADHFE1Q8IWW8 467 aa13.03□□□□□ -0.32
USP42-203ENST00000426246 NLGN4XQ8N0W4 816 aa13.03□□□□□ -0.32
USP42-203ENST00000426246 ZNF461Q8TAF7 563 aa13.03□□□□□ -0.32
USP42-203ENST00000426246 ZFP90Q8TF47 636 aa13.03□□□□□ -0.32
USP42-203ENST00000426246 PROX1Q92786 737 aa13.03□□□□□ -0.32
USP42-203ENST00000426246 ACDQ96AP0 544 aa13.03□□□□□ -0.32
USP42-203ENST00000426246 SH3KBP1Q96B97 665 aa13.03□□□□□ -0.32
USP42-203ENST00000426246 ZNF583Q96ND8 569 aa13.03□□□□□ -0.32
USP42-203ENST00000426246 MRM3Q9HC36 420 aaKnown RBP13.03□□□□□ -0.32
USP42-203ENST00000426246 MOSPD1Q9UJG1 213 aa13.03□□□□□ -0.32
USP42-203ENST00000426246 ABCG2Q9UNQ0 655 aa13.03□□□□□ -0.32
USP42-203ENST00000426246 OR7A17O14581 309 aa13.03□□□□□ -0.32
USP42-203ENST00000426246 NDUFS2O75306 463 aa13.03□□□□□ -0.32
USP42-203ENST00000426246 STC2O76061 302 aa13.03□□□□□ -0.32
USP42-203ENST00000426246 FUCA1P04066 466 aa13.03□□□□□ -0.32
USP42-203ENST00000426246 ANXA5P08758 320 aa13.03□□□□□ -0.32
USP42-203ENST00000426246 RPS14P62263 151 aaKnown RBP13.03□□□□□ -0.32
USP42-203ENST00000426246 ZNF33AQ06730 810 aa13.03□□□□□ -0.32
USP42-203ENST00000426246 HKDC1Q2TB90 917 aa13.03□□□□□ -0.32
USP42-203ENST00000426246 CTU2Q2VPK5 515 aaKnown RBP13.03□□□□□ -0.32
USP42-203ENST00000426246 COLEC12Q5KU26 742 aa13.03□□□□□ -0.32
USP42-203ENST00000426246 ZBTB2Q8N680 514 aa13.03□□□□□ -0.32
USP42-203ENST00000426246 TBC1D15Q8TC07 691 aa13.03□□□□□ -0.32
USP42-203ENST00000426246 STON2Q8WXE9 905 aa13.03□□□□□ -0.32
USP42-203ENST00000426246 APIPQ96GX9 242 aa13.03□□□□□ -0.32
USP42-203ENST00000426246 PPP3R2Q96LZ3 170 aa13.03□□□□□ -0.32
USP42-203ENST00000426246 CHCHD6Q9BRQ6 235 aa13.03□□□□□ -0.32
USP42-203ENST00000426246 AMBRA1Q9C0C7 1298 aa13.03□□□□□ -0.32
USP42-203ENST00000426246 MAGEH1Q9H213 219 aa13.03□□□□□ -0.32
USP42-203ENST00000426246 KRT84Q9NSB2 600 aa13.03□□□□□ -0.32
USP42-203ENST00000426246 ACSL6Q9UKU0 697 aa13.03□□□□□ -0.32
USP42-203ENST00000426246 A8MV72 311 aaPredicted RBP13.02□□□□□ -0.32
USP42-203ENST00000426246 BCAS1O75363 584 aaPredicted RBP13.02□□□□□ -0.32
USP42-203ENST00000426246 CLDN11O75508 207 aa13.02□□□□□ -0.32
USP42-203ENST00000426246 APOL3O95236 402 aa13.02□□□□□ -0.32
USP42-203ENST00000426246 RPS17P08708 135 aaKnown RBP13.02□□□□□ -0.32
USP42-203ENST00000426246 DGKAP23743 735 aa13.02□□□□□ -0.32
USP42-203ENST00000426246 GABRR2P28476 465 aa13.02□□□□□ -0.32
USP42-203ENST00000426246 GTF2E2P29084 291 aaKnown RBP13.02□□□□□ -0.32
USP42-203ENST00000426246 ZNF140P52738 457 aaPredicted RBP13.02□□□□□ -0.32
USP42-203ENST00000426246 LBX1P52954 281 aa13.02□□□□□ -0.32
USP42-203ENST00000426246 ARF5P84085 180 aa13.02□□□□□ -0.32
USP42-203ENST00000426246 SYTL3Q4VX76 610 aa13.02□□□□□ -0.32
USP42-203ENST00000426246 ELMSAN1Q6PJG2 1045 aa13.02□□□□□ -0.32
USP42-203ENST00000426246 CCDC103Q8IW40 242 aa13.02□□□□□ -0.32
USP42-203ENST00000426246 LILRA3Q8N6C8 439 aaPredicted RBP13.02□□□□□ -0.32
USP42-203ENST00000426246 SLC22A17Q8WUG5 538 aa13.02□□□□□ -0.32
USP42-203ENST00000426246 REXO4Q9GZR2 422 aaKnown RBP13.02□□□□□ -0.32
USP42-203ENST00000426246 DDX28Q9NUL7 540 aaKnown RBP13.02□□□□□ -0.32
USP42-203ENST00000426246 HECAQ9UBI9 543 aaPredicted RBP13.02□□□□□ -0.32
USP42-203ENST00000426246 MAP4K5Q9Y4K4 846 aa13.02□□□□□ -0.32
USP42-203ENST00000426246 DNMT3AQ9Y6K1 912 aaPredicted RBP13.02□□□□□ -0.32
USP42-203ENST00000426246 DOCK6Q96HP0 2047 aa13.02□□□□□ -0.32
USP42-203ENST00000426246 VPS4BO75351 444 aa13.02□□□□□ -0.33
USP42-203ENST00000426246 BMP10O95393 424 aa13.02□□□□□ -0.33
USP42-203ENST00000426246 ENO2P09104 434 aaPredicted RBP13.02□□□□□ -0.33
USP42-203ENST00000426246 HTR1BP28222 390 aa13.02□□□□□ -0.33
USP42-203ENST00000426246 HNF1BP35680 557 aa13.02□□□□□ -0.33
USP42-203ENST00000426246 PRIM2P49643 509 aa13.02□□□□□ -0.33
USP42-203ENST00000426246 EFL1Q7Z2Z2 1120 aaKnown RBP13.02□□□□□ -0.33
USP42-203ENST00000426246 DDX53Q86TM3 631 aaKnown RBP13.02□□□□□ -0.33
USP42-203ENST00000426246 TMEM132CQ8N3T6 1108 aa13.02□□□□□ -0.33
USP42-203ENST00000426246 EID2BQ96D98 161 aa13.02□□□□□ -0.33
USP42-203ENST00000426246 TMEM169Q96HH4 297 aa13.02□□□□□ -0.33
USP42-203ENST00000426246 IL26Q9NPH9 171 aa13.02□□□□□ -0.33
USP42-203ENST00000426246 MBD1Q9UIS9 605 aaPredicted RBP13.02□□□□□ -0.33
USP42-203ENST00000426246 A0A1B0GVM2 712 aa13.02□□□□□ -0.33
USP42-203ENST00000426246 SH3PXD2BA1X283 911 aa13.02□□□□□ -0.33
USP42-203ENST00000426246 MGAT4DA6NG13 374 aa13.02□□□□□ -0.33
USP42-203ENST00000426246 FPGTO14772 594 aa13.02□□□□□ -0.33
USP42-203ENST00000426246 TFECO14948 347 aaPredicted RBP13.02□□□□□ -0.33
USP42-203ENST00000426246 EEDO75530 441 aaKnown RBP13.02□□□□□ -0.33
USP42-203ENST00000426246 FGF4P08620 206 aa13.02□□□□□ -0.33
USP42-203ENST00000426246 ENGP17813 658 aa13.02□□□□□ -0.33
USP42-203ENST00000426246 MSH3P20585 1137 aa13.02□□□□□ -0.33
USP42-203ENST00000426246 MXD1Q05195 221 aa13.02□□□□□ -0.33
USP42-203ENST00000426246 ACSM2AQ08AH3 577 aa13.02□□□□□ -0.33
USP42-203ENST00000426246 ACSM2BQ68CK6 577 aa13.02□□□□□ -0.33
USP42-203ENST00000426246 ADCK2Q7Z695 626 aa13.02□□□□□ -0.33
USP42-203ENST00000426246 IGFN1Q86VF2 1251 aa13.02□□□□□ -0.33
USP42-203ENST00000426246 PROSER1Q86XN7 944 aa13.02□□□□□ -0.33
USP42-203ENST00000426246 SPARTQ8N0X7 666 aa13.02□□□□□ -0.33
USP42-203ENST00000426246 POC5Q8NA72 575 aa13.02□□□□□ -0.33
USP42-203ENST00000426246 ZNF558Q96NG5 402 aa13.02□□□□□ -0.33
USP42-203ENST00000426246 RNF167Q9H6Y7 350 aa13.02□□□□□ -0.33
USP42-203ENST00000426246 MRGBPQ9NV56 204 aa13.02□□□□□ -0.33
USP42-203ENST00000426246 CFAP97Q9P2B7 532 aa13.02□□□□□ -0.33
USP42-203ENST00000426246 CFAP20Q9Y6A4 193 aaKnown RBP13.02□□□□□ -0.33
USP42-203ENST00000426246 A0A096LPI6 279 aa13.01□□□□□ -0.33
USP42-203ENST00000426246 JAK1P23458 1154 aa13.01□□□□□ -0.33
USP42-203ENST00000426246 C21orf33P30042 268 aaPredicted RBP13.01□□□□□ -0.33
USP42-203ENST00000426246 PTGER3P43115 390 aa13.01□□□□□ -0.33
USP42-203ENST00000426246 RECQLP46063 649 aaPredicted RBP13.01□□□□□ -0.33
USP42-203ENST00000426246 CDH4P55283 916 aa13.01□□□□□ -0.33
USP42-203ENST00000426246 EEFSECP57772 596 aaKnown RBP13.01□□□□□ -0.33
USP42-203ENST00000426246 EMX2Q04743 252 aa13.01□□□□□ -0.33
USP42-203ENST00000426246 SLC14A1Q13336 389 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms