RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 KNTC1P50748 2209 aa23.59■■□□□ 1.37
VEGFA-209ENST00000425836 A0A1W2PPM1 405 aa23.59■■□□□ 1.37
VEGFA-209ENST00000425836 FOXO6A8MYZ6 492 aa23.59■■□□□ 1.37
VEGFA-209ENST00000425836 PRAMEF10O60809 474 aa23.59■■□□□ 1.37
VEGFA-209ENST00000425836 MT-ND3P03897 115 aa23.59■■□□□ 1.37
VEGFA-209ENST00000425836 ANXA5P08758 320 aa23.59■■□□□ 1.37
VEGFA-209ENST00000425836 ARL4DP49703 201 aa23.59■■□□□ 1.37
VEGFA-209ENST00000425836 YBX1P67809 324 aaKnown RBP23.59■■□□□ 1.37
VEGFA-209ENST00000425836 SH3BP2P78314 561 aa23.59■■□□□ 1.37
VEGFA-209ENST00000425836 ZIC1Q15915 447 aa23.59■■□□□ 1.37
VEGFA-209ENST00000425836 BEND6Q5SZJ8 279 aaPredicted RBP23.59■■□□□ 1.37
VEGFA-209ENST00000425836 KIAA1614Q5VZ46 1190 aa23.59■■□□□ 1.37
VEGFA-209ENST00000425836 OR2L3Q8NG85 312 aa23.59■■□□□ 1.37
VEGFA-209ENST00000425836 EGFL8Q99944 293 aa23.59■■□□□ 1.37
VEGFA-209ENST00000425836 CCDC177Q9NQR7 707 aaPredicted RBP23.59■■□□□ 1.37
VEGFA-209ENST00000425836 ABCF3Q9NUQ8 709 aa23.59■■□□□ 1.37
VEGFA-209ENST00000425836 PCMTD2Q9NV79 361 aa23.59■■□□□ 1.37
VEGFA-209ENST00000425836 TAC3Q9UHF0 121 aa23.59■■□□□ 1.37
VEGFA-209ENST00000425836 BTRCQ9Y297 605 aa23.59■■□□□ 1.37
VEGFA-209ENST00000425836 NCF1BA6NI72 391 aaPredicted RBP23.58■■□□□ 1.37
VEGFA-209ENST00000425836 NCF1CA8MVU1 366 aaPredicted RBP23.58■■□□□ 1.37
VEGFA-209ENST00000425836 B4E171 279 aa23.58■■□□□ 1.37
VEGFA-209ENST00000425836 KERAO60938 352 aa23.58■■□□□ 1.37
VEGFA-209ENST00000425836 FKBP9O95302 570 aa23.58■■□□□ 1.37
VEGFA-209ENST00000425836 NCF1P14598 390 aaPredicted RBP23.58■■□□□ 1.37
VEGFA-209ENST00000425836 TSPAN7P41732 249 aa23.58■■□□□ 1.37
VEGFA-209ENST00000425836 TBPL1P62380 186 aa23.58■■□□□ 1.37
VEGFA-209ENST00000425836 KCNAB1Q14722 419 aa23.58■■□□□ 1.37
VEGFA-209ENST00000425836 KLC3Q6P597 504 aa23.58■■□□□ 1.37
VEGFA-209ENST00000425836 IQCKQ8N0W5 287 aa23.58■■□□□ 1.37
VEGFA-209ENST00000425836 C19orf47Q8N9M1 422 aaKnown RBP23.58■■□□□ 1.37
VEGFA-209ENST00000425836 OR56A3Q8NH54 315 aa23.58■■□□□ 1.37
VEGFA-209ENST00000425836 RHEBL1Q8TAI7 183 aa23.58■■□□□ 1.37
VEGFA-209ENST00000425836 ACMSDQ8TDX5 336 aa23.58■■□□□ 1.37
VEGFA-209ENST00000425836 HNRNPLLQ8WVV9 542 aaKnown RBP23.58■■□□□ 1.37
VEGFA-209ENST00000425836 RHBDF1Q96CC6 855 aa23.58■■□□□ 1.37
VEGFA-209ENST00000425836 MED8Q96G25 268 aa23.58■■□□□ 1.37
VEGFA-209ENST00000425836 TMEM109Q9BVC6 243 aa23.58■■□□□ 1.37
VEGFA-209ENST00000425836 SGPP1Q9BX95 441 aa23.58■■□□□ 1.37
VEGFA-209ENST00000425836 SOHLH2Q9NX45 425 aa23.58■■□□□ 1.37
VEGFA-209ENST00000425836 NCOR2Q9Y618 2525 aa23.57■■□□□ 1.36
VEGFA-209ENST00000425836 CCDC189A1A4V9 331 aa23.57■■□□□ 1.36
VEGFA-209ENST00000425836 TNFSF15O95150 251 aa23.57■■□□□ 1.36
VEGFA-209ENST00000425836 FOLR1P15328 257 aa23.57■■□□□ 1.36
VEGFA-209ENST00000425836 KRT15P19012 456 aa23.57■■□□□ 1.36
VEGFA-209ENST00000425836 MAGP20916 626 aa23.57■■□□□ 1.36
VEGFA-209ENST00000425836 HNMTP50135 292 aa23.57■■□□□ 1.36
VEGFA-209ENST00000425836 MC2RQ01718 297 aa23.57■■□□□ 1.36
VEGFA-209ENST00000425836 PRDX1Q06830 199 aaKnown RBP23.57■■□□□ 1.36
VEGFA-209ENST00000425836 CDKL4Q5MAI5 379 aa23.57■■□□□ 1.36
VEGFA-209ENST00000425836 RIBC1Q8N443 379 aaPredicted RBP23.57■■□□□ 1.36
VEGFA-209ENST00000425836 GATA6Q92908 595 aa23.57■■□□□ 1.36
VEGFA-209ENST00000425836 ALKBH8Q96BT7 664 aaKnown RBP23.57■■□□□ 1.36
VEGFA-209ENST00000425836 PYCR2Q96C36 320 aa23.57■■□□□ 1.36
VEGFA-209ENST00000425836 NXPE2Q96DL1 559 aa23.57■■□□□ 1.36
VEGFA-209ENST00000425836 SLC46A1Q96NT5 459 aa23.57■■□□□ 1.36
VEGFA-209ENST00000425836 AK5Q9Y6K8 562 aa23.57■■□□□ 1.36
VEGFA-209ENST00000425836 GOLGA8RI6L899 631 aa23.57■■□□□ 1.36
VEGFA-209ENST00000425836 EBLN1P0CF75 366 aa23.57■■□□□ 1.36
VEGFA-209ENST00000425836 PYGBP11216 843 aa23.57■■□□□ 1.36
VEGFA-209ENST00000425836 MAPK10P53779 464 aa23.57■■□□□ 1.36
VEGFA-209ENST00000425836 TSNAXIP1Q2TAA8 658 aa23.57■■□□□ 1.36
VEGFA-209ENST00000425836 C18orf21Q32NC0 220 aaPredicted RBP23.57■■□□□ 1.36
VEGFA-209ENST00000425836 THEMIS2Q5TEJ8 643 aa23.57■■□□□ 1.36
VEGFA-209ENST00000425836 ICE2Q659A1 982 aa23.57■■□□□ 1.36
VEGFA-209ENST00000425836 CAPN13Q6MZZ7 669 aaPredicted RBP23.57■■□□□ 1.36
VEGFA-209ENST00000425836 SH2D5Q6ZV89 423 aa23.57■■□□□ 1.36
VEGFA-209ENST00000425836 EXT2Q93063 718 aa23.57■■□□□ 1.36
VEGFA-209ENST00000425836 TCTN2Q96GX1 697 aa23.57■■□□□ 1.36
VEGFA-209ENST00000425836 FAM60AQ9NP50 221 aa23.57■■□□□ 1.36
VEGFA-209ENST00000425836 PDE7BQ9NP56 450 aa23.57■■□□□ 1.36
VEGFA-209ENST00000425836 INTS7Q9NVH2 962 aaKnown RBP23.57■■□□□ 1.36
VEGFA-209ENST00000425836 SLC39A1Q9NY26 324 aa23.57■■□□□ 1.36
VEGFA-209ENST00000425836 CD274Q9NZQ7 290 aa23.57■■□□□ 1.36
VEGFA-209ENST00000425836 CCND1P24385 295 aa23.56■■□□□ 1.36
VEGFA-209ENST00000425836 CMPK1P30085 196 aa23.56■■□□□ 1.36
VEGFA-209ENST00000425836 GRIA3P42263 894 aa23.56■■□□□ 1.36
VEGFA-209ENST00000425836 PTCHD3Q3KNS1 767 aa23.56■■□□□ 1.36
VEGFA-209ENST00000425836 TECRLQ5HYJ1 363 aa23.56■■□□□ 1.36
VEGFA-209ENST00000425836 PRAMEF13Q5VWM6 474 aa23.56■■□□□ 1.36
VEGFA-209ENST00000425836 FCRL6Q6DN72 434 aa23.56■■□□□ 1.36
VEGFA-209ENST00000425836 SULT1C3Q6IMI6 304 aa23.56■■□□□ 1.36
VEGFA-209ENST00000425836 FIGLAQ6QHK4 219 aa23.56■■□□□ 1.36
VEGFA-209ENST00000425836 IGF2-ASQ6U949 168 aa23.56■■□□□ 1.36
VEGFA-209ENST00000425836 PDPRQ8NCN5 879 aa23.56■■□□□ 1.36
VEGFA-209ENST00000425836 ZUFSPQ96AP4 578 aa23.56■■□□□ 1.36
VEGFA-209ENST00000425836 TMEM121BQ9BXQ6 578 aaPredicted RBP23.56■■□□□ 1.36
VEGFA-209ENST00000425836 CHRNA10Q9GZZ6 450 aa23.56■■□□□ 1.36
VEGFA-209ENST00000425836 PCBD2Q9H0N5 130 aa23.56■■□□□ 1.36
VEGFA-209ENST00000425836 MRPS30Q9NP92 439 aaKnown RBP23.56■■□□□ 1.36
VEGFA-209ENST00000425836 FBXO8Q9NRD0 319 aa23.56■■□□□ 1.36
VEGFA-209ENST00000425836 LGALS13Q9UHV8 139 aa23.56■■□□□ 1.36
VEGFA-209ENST00000425836 KLK4Q9Y5K2 254 aa23.56■■□□□ 1.36
VEGFA-209ENST00000425836 UBXN8O00124 270 aa23.55■■□□□ 1.36
VEGFA-209ENST00000425836 TAPBPO15533 448 aa23.55■■□□□ 1.36
VEGFA-209ENST00000425836 BRINP1O60477 761 aa23.55■■□□□ 1.36
VEGFA-209ENST00000425836 DXOO77932 396 aaKnown RBP23.55■■□□□ 1.36
VEGFA-209ENST00000425836 MTHFD2P13995 350 aa23.55■■□□□ 1.36
VEGFA-209ENST00000425836 NPPBP16860 134 aa23.55■■□□□ 1.36
VEGFA-209ENST00000425836 RBMS1P29558 406 aaKnown RBP23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms