RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 SP5Q6BEB4 398 aaPredicted RBP12.24□□□□□ -0.45
SGCE-203ENST00000425444 ZBTB2Q8N680 514 aa12.24□□□□□ -0.45
SGCE-203ENST00000425444 LMNTD1Q8N9Z9 388 aa12.24□□□□□ -0.45
SGCE-203ENST00000425444 SLC38A9Q8NBW4 561 aa12.24□□□□□ -0.45
SGCE-203ENST00000425444 MAGEC3Q8TD91 643 aa12.24□□□□□ -0.45
SGCE-203ENST00000425444 SEC14L1Q92503 715 aa12.24□□□□□ -0.45
SGCE-203ENST00000425444 RAD51AP1Q96B01 352 aa12.24□□□□□ -0.45
SGCE-203ENST00000425444 SLC22A18Q96BI1 424 aa12.24□□□□□ -0.45
SGCE-203ENST00000425444 C19orf60Q96EN9 201 aa12.24□□□□□ -0.45
SGCE-203ENST00000425444 POM121Q96HA1 1249 aa12.24□□□□□ -0.45
SGCE-203ENST00000425444 LRFN5Q96NI6 719 aa12.24□□□□□ -0.45
SGCE-203ENST00000425444 BIRC8Q96P09 236 aa12.24□□□□□ -0.45
SGCE-203ENST00000425444 RUFY1Q96T51 708 aa12.24□□□□□ -0.45
SGCE-203ENST00000425444 NAPGQ99747 312 aaPredicted RBP12.24□□□□□ -0.45
SGCE-203ENST00000425444 GPR87Q9BY21 358 aa12.24□□□□□ -0.45
SGCE-203ENST00000425444 CHST8Q9H2A9 424 aa12.24□□□□□ -0.45
SGCE-203ENST00000425444 RUBCNLQ9H714 662 aa12.24□□□□□ -0.45
SGCE-203ENST00000425444 AKIRIN1Q9H9L7 192 aaPredicted RBP12.24□□□□□ -0.45
SGCE-203ENST00000425444 FAM60AQ9NP50 221 aa12.24□□□□□ -0.45
SGCE-203ENST00000425444 FBXO6Q9NRD1 293 aaPredicted RBP12.24□□□□□ -0.45
SGCE-203ENST00000425444 C20orf96Q9NUD7 363 aaPredicted RBP12.24□□□□□ -0.45
SGCE-203ENST00000425444 NFS1Q9Y697 457 aa12.24□□□□□ -0.45
SGCE-203ENST00000425444 DNALI1O14645 258 aaPredicted RBP12.23□□□□□ -0.45
SGCE-203ENST00000425444 ZNF749O43361 778 aa12.23□□□□□ -0.45
SGCE-203ENST00000425444 USP1O94782 785 aa12.23□□□□□ -0.45
SGCE-203ENST00000425444 CBX6O95503 412 aa12.23□□□□□ -0.45
SGCE-203ENST00000425444 HBQ1P09105 142 aa12.23□□□□□ -0.45
SGCE-203ENST00000425444 ATXN8OSP0DMR3 200 aa12.23□□□□□ -0.45
SGCE-203ENST00000425444 MAGP20916 626 aa12.23□□□□□ -0.45
SGCE-203ENST00000425444 PTPN4P29074 926 aa12.23□□□□□ -0.45
SGCE-203ENST00000425444 CCNFP41002 786 aa12.23□□□□□ -0.45
SGCE-203ENST00000425444 SLC1A2P43004 574 aa12.23□□□□□ -0.45
SGCE-203ENST00000425444 MAGEA3P43357 314 aa12.23□□□□□ -0.45
SGCE-203ENST00000425444 CCL11P51671 97 aa12.23□□□□□ -0.45
SGCE-203ENST00000425444 ADARP55265 1226 aaKnown RBP12.23□□□□□ -0.45
SGCE-203ENST00000425444 PTK6Q13882 451 aa12.23□□□□□ -0.45
SGCE-203ENST00000425444 GRB7Q14451 532 aa12.23□□□□□ -0.45
SGCE-203ENST00000425444 SF1Q15637 639 aaKnown RBP12.23□□□□□ -0.45
SGCE-203ENST00000425444 ZIC1Q15915 447 aa12.23□□□□□ -0.45
SGCE-203ENST00000425444 TTLL9Q3SXZ7 439 aa12.23□□□□□ -0.45
SGCE-203ENST00000425444 ZNF789Q5FWF6 425 aa12.23□□□□□ -0.45
SGCE-203ENST00000425444 RNASEH2BQ5TBB1 312 aaKnown RBP12.23□□□□□ -0.45
SGCE-203ENST00000425444 CPZQ66K79 652 aa12.23□□□□□ -0.45
SGCE-203ENST00000425444 CENPUQ71F23 418 aa12.23□□□□□ -0.45
SGCE-203ENST00000425444 PCGF5Q86SE9 256 aa12.23□□□□□ -0.45
SGCE-203ENST00000425444 SYVN1Q86TM6 617 aa12.23□□□□□ -0.45
SGCE-203ENST00000425444 DENND6AQ8IWF6 608 aa12.23□□□□□ -0.45
SGCE-203ENST00000425444 FAM20CQ8IXL6 584 aa12.23□□□□□ -0.45
SGCE-203ENST00000425444 SYTL1Q8IYJ3 562 aa12.23□□□□□ -0.45
SGCE-203ENST00000425444 DSELQ8IZU8 1212 aa12.23□□□□□ -0.45
SGCE-203ENST00000425444 Q8NA96 180 aa12.23□□□□□ -0.45
SGCE-203ENST00000425444 LINC01555Q8NAE3 123 aa12.23□□□□□ -0.45
SGCE-203ENST00000425444 OR2L8Q8NGY9 312 aa12.23□□□□□ -0.45
SGCE-203ENST00000425444 FLVCR1-AS1Q8TAF5 88 aa12.23□□□□□ -0.45
SGCE-203ENST00000425444 CALML6Q8TD86 181 aa12.23□□□□□ -0.45
SGCE-203ENST00000425444 PDLIM2Q96JY6 352 aa12.23□□□□□ -0.45
SGCE-203ENST00000425444 PCMTD2Q9NV79 361 aa12.23□□□□□ -0.45
SGCE-203ENST00000425444 INTS7Q9NVH2 962 aaKnown RBP12.23□□□□□ -0.45
SGCE-203ENST00000425444 PYCARDQ9ULZ3 195 aa12.23□□□□□ -0.45
SGCE-203ENST00000425444 SNX7Q9UNH6 387 aa12.23□□□□□ -0.45
SGCE-203ENST00000425444 FARSAQ9Y285 508 aaKnown RBP12.23□□□□□ -0.45
SGCE-203ENST00000425444 KLHL20Q9Y2M5 609 aa12.23□□□□□ -0.45
SGCE-203ENST00000425444 PCDHGA9Q9Y5G4 932 aaKnown RBP12.23□□□□□ -0.45
SGCE-203ENST00000425444 MDC1Q14676 2089 aaKnown RBP12.22□□□□□ -0.45
SGCE-203ENST00000425444 ZCWPW2A0A1B0GU75 182 aa12.22□□□□□ -0.45
SGCE-203ENST00000425444 ANKUB1A6NFN9 424 aa12.22□□□□□ -0.45
SGCE-203ENST00000425444 C9J4A7 227 aa12.22□□□□□ -0.45
SGCE-203ENST00000425444 ZSCAN9O15535 394 aaPredicted RBP12.22□□□□□ -0.45
SGCE-203ENST00000425444 DIAPH2O60879 1101 aa12.22□□□□□ -0.45
SGCE-203ENST00000425444 C1orf105O95561 183 aa12.22□□□□□ -0.45
SGCE-203ENST00000425444 F7P08709 466 aaPredicted RBP12.22□□□□□ -0.45
SGCE-203ENST00000425444 PGAM1P18669 254 aa12.22□□□□□ -0.45
SGCE-203ENST00000425444 AGXTP21549 392 aa12.22□□□□□ -0.45
SGCE-203ENST00000425444 ATP5DP30049 168 aa12.22□□□□□ -0.45
SGCE-203ENST00000425444 RORAP35398 523 aa12.22□□□□□ -0.45
SGCE-203ENST00000425444 DHX9Q08211 1270 aaKnown RBP12.22□□□□□ -0.45
SGCE-203ENST00000425444 CHAF1BQ13112 559 aa12.22□□□□□ -0.45
SGCE-203ENST00000425444 CTBP1Q13363 440 aa12.22□□□□□ -0.45
SGCE-203ENST00000425444 ELOAQ14241 798 aaKnown RBP12.22□□□□□ -0.45
SGCE-203ENST00000425444 PTCHD3Q3KNS1 767 aa12.22□□□□□ -0.45
SGCE-203ENST00000425444 IZUMO3Q5VZ72 239 aa12.22□□□□□ -0.45
SGCE-203ENST00000425444 KLHL7Q8IXQ5 586 aa12.22□□□□□ -0.45
SGCE-203ENST00000425444 LMNTD2Q8IXW0 634 aa12.22□□□□□ -0.45
SGCE-203ENST00000425444 ENDOVQ8N8Q3 282 aaKnown RBP12.22□□□□□ -0.45
SGCE-203ENST00000425444 RUNDC3BQ96NL0 473 aa12.22□□□□□ -0.45
SGCE-203ENST00000425444 FAM167BQ9BTA0 163 aa12.22□□□□□ -0.45
SGCE-203ENST00000425444 MENTQ9BUN1 341 aa12.22□□□□□ -0.45
SGCE-203ENST00000425444 MLXIPLQ9NP71 852 aa12.22□□□□□ -0.45
SGCE-203ENST00000425444 TXLNGQ9NUQ3 528 aa12.22□□□□□ -0.45
SGCE-203ENST00000425444 PCYOX1Q9UHG3 505 aa12.22□□□□□ -0.45
SGCE-203ENST00000425444 ZNF451Q9Y4E5 1061 aa12.22□□□□□ -0.45
SGCE-203ENST00000425444 SAR1BQ9Y6B6 198 aa12.22□□□□□ -0.45
SGCE-203ENST00000425444 AP1M2Q9Y6Q5 423 aa12.22□□□□□ -0.45
SGCE-203ENST00000425444 KRT87PA6NCN2 255 aa12.21□□□□□ -0.45
SGCE-203ENST00000425444 DPM1O60762 260 aa12.21□□□□□ -0.45
SGCE-203ENST00000425444 CATP04040 527 aaKnown RBP12.21□□□□□ -0.45
SGCE-203ENST00000425444 RAB40ALP0C0E4 278 aa12.21□□□□□ -0.45
SGCE-203ENST00000425444 PAFAH1B1P43034 410 aa12.21□□□□□ -0.45
SGCE-203ENST00000425444 TSTA3Q13630 321 aaPredicted RBP12.21□□□□□ -0.45
SGCE-203ENST00000425444 IL10RAQ13651 578 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms