RNA–Protein interactions for RNA: ENST00000423902.6

CHD7-201, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD7, Length 11,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-201ENST00000423902 SETD9Q8NE22 299 aa8.18□□□□□ -1.1
CHD7-201ENST00000423902 DEFB126Q9BYW3 111 aa8.18□□□□□ -1.1
CHD7-201ENST00000423902 VPS29Q9UBQ0 182 aa8.18□□□□□ -1.1
CHD7-201ENST00000423902 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.18□□□□□ -1.1
CHD7-201ENST00000423902 FAM227AF5H4B4 570 aa8.18□□□□□ -1.1
CHD7-201ENST00000423902 MGRN1O60291 552 aa8.18□□□□□ -1.1
CHD7-201ENST00000423902 IL33O95760 270 aa8.18□□□□□ -1.1
CHD7-201ENST00000423902 CD72P21854 359 aa8.18□□□□□ -1.1
CHD7-201ENST00000423902 USP53Q70EK8 1073 aa8.18□□□□□ -1.1
CHD7-201ENST00000423902 SCML4Q8N228 414 aa8.18□□□□□ -1.1
CHD7-201ENST00000423902 ASB16Q96NS5 453 aa8.18□□□□□ -1.1
CHD7-201ENST00000423902 PCDH7O60245 1069 aa8.18□□□□□ -1.1
CHD7-201ENST00000423902 ABLIM3O94929 683 aa8.18□□□□□ -1.1
CHD7-201ENST00000423902 DCNP07585 359 aaKnown RBP8.18□□□□□ -1.1
CHD7-201ENST00000423902 HNRNPLP14866 589 aaKnown RBP eCLIP8.18□□□□□ -1.12e-6■■□□□ 13.9
CHD7-201ENST00000423902 FSTL4Q6MZW2 842 aa8.18□□□□□ -1.1
CHD7-201ENST00000423902 ALKAL1Q6UXT8 129 aa8.18□□□□□ -1.1
CHD7-201ENST00000423902 TMIGD1Q6UXZ0 262 aa8.18□□□□□ -1.1
CHD7-201ENST00000423902 TBC1D21Q8IYX1 336 aa8.18□□□□□ -1.1
CHD7-201ENST00000423902 BHLHE22Q8NFJ8 381 aaPredicted RBP8.18□□□□□ -1.1
CHD7-201ENST00000423902 CENPIQ92674 756 aaPredicted RBP8.18□□□□□ -1.1
CHD7-201ENST00000423902 C1orf50Q9BV19 199 aa8.18□□□□□ -1.1
CHD7-201ENST00000423902 BTRCQ9Y297 605 aa8.18□□□□□ -1.1
CHD7-201ENST00000423902 TMED5Q9Y3A6 229 aa8.18□□□□□ -1.1
CHD7-201ENST00000423902 CTHP32929 405 aa8.18□□□□□ -1.1
CHD7-201ENST00000423902 KCNJ2P63252 427 aa8.18□□□□□ -1.1
CHD7-201ENST00000423902 CA9Q16790 459 aa8.18□□□□□ -1.1
CHD7-201ENST00000423902 C9orf50Q5SZB4 431 aa8.18□□□□□ -1.1
CHD7-201ENST00000423902 THOC6Q86W42 341 aaKnown RBP8.18□□□□□ -1.1
CHD7-201ENST00000423902 OR13C4Q8NGS5 318 aa8.18□□□□□ -1.1
CHD7-201ENST00000423902 Q9N2J8 555 aa8.18□□□□□ -1.1
CHD7-201ENST00000423902 CXXC1Q9P0U4 656 aaPredicted RBP8.18□□□□□ -1.1
CHD7-201ENST00000423902 LCHNA4D1U4 455 aa8.17□□□□□ -1.1
CHD7-201ENST00000423902 CAPN8A6NHC0 703 aa8.17□□□□□ -1.1
CHD7-201ENST00000423902 SAGP10523 405 aaPredicted RBP8.17□□□□□ -1.1
CHD7-201ENST00000423902 PDCD4Q53EL6 469 aaKnown RBP8.17□□□□□ -1.1
CHD7-201ENST00000423902 C10orf107Q8IVU9 208 aa8.17□□□□□ -1.1
CHD7-201ENST00000423902 AGBL5Q8NDL9 886 aa8.17□□□□□ -1.1
CHD7-201ENST00000423902 REXO4Q9GZR2 422 aaKnown RBP8.17□□□□□ -1.1
CHD7-201ENST00000423902 GALNT8Q9NY28 637 aa8.17□□□□□ -1.1
CHD7-201ENST00000423902 TTLL8A6PVC2 850 aa8.17□□□□□ -1.1
CHD7-201ENST00000423902 ALOX5P09917 674 aa8.17□□□□□ -1.1
CHD7-201ENST00000423902 SRCP12931 536 aa8.17□□□□□ -1.1
CHD7-201ENST00000423902 S100GP29377 79 aa8.17□□□□□ -1.1
CHD7-201ENST00000423902 OR4D2P58180 307 aa8.17□□□□□ -1.1
CHD7-201ENST00000423902 SLC25A11Q02978 314 aaKnown RBP8.17□□□□□ -1.1
CHD7-201ENST00000423902 EGFLAMQ63HQ2 1017 aa8.17□□□□□ -1.1
CHD7-201ENST00000423902 FGD2Q7Z6J4 655 aa8.17□□□□□ -1.1
CHD7-201ENST00000423902 XAGE5Q8WWM1 108 aa8.17□□□□□ -1.1
CHD7-201ENST00000423902 FZD4Q9ULV1 537 aa8.17□□□□□ -1.1
CHD7-201ENST00000423902 ADAMTS3O15072 1205 aa8.17□□□□□ -1.1
CHD7-201ENST00000423902 TPST1O60507 370 aa8.17□□□□□ -1.1
CHD7-201ENST00000423902 NIPSNAP2O75323 286 aa8.17□□□□□ -1.1
CHD7-201ENST00000423902 CLK1P49759 484 aaKnown RBP8.17□□□□□ -1.1
CHD7-201ENST00000423902 POMZP3Q6PJE2 187 aa8.17□□□□□ -1.1
CHD7-201ENST00000423902 UNQ6126/PRO20091Q6UXV3 157 aa8.17□□□□□ -1.1
CHD7-201ENST00000423902 KIAA2013Q8IYS2 634 aa8.17□□□□□ -1.1
CHD7-201ENST00000423902 SDR16C5Q8N3Y7 309 aa8.17□□□□□ -1.1
CHD7-201ENST00000423902 NSMCE3Q96MG7 304 aa8.17□□□□□ -1.1
CHD7-201ENST00000423902 PATJQ8NI35 1801 aa8.17□□□□□ -1.1
CHD7-201ENST00000423902 TTC24A2A3L6 582 aaPredicted RBP8.17□□□□□ -1.1
CHD7-201ENST00000423902 TARSP26639 723 aaKnown RBP8.17□□□□□ -1.1
CHD7-201ENST00000423902 PXNP49023 591 aaPredicted RBP8.17□□□□□ -1.1
CHD7-201ENST00000423902 RPS3AP61247 264 aaKnown RBP8.17□□□□□ -1.1
CHD7-201ENST00000423902 HSPB3Q12988 150 aa8.17□□□□□ -1.1
CHD7-201ENST00000423902 STK32CQ86UX6 486 aa8.17□□□□□ -1.1
CHD7-201ENST00000423902 DEPDC4Q8N2C3 294 aa8.17□□□□□ -1.1
CHD7-201ENST00000423902 IMP4Q96G21 291 aaKnown RBP8.17□□□□□ -1.1
CHD7-201ENST00000423902 SLC35G5Q96KT7 338 aa8.17□□□□□ -1.1
CHD7-201ENST00000423902 LOC285556D6RIA3 1793 aa8.17□□□□□ -1.1
CHD7-201ENST00000423902 SERPINB3P29508 390 aa8.17□□□□□ -1.1
CHD7-201ENST00000423902 ASPGQ86U10 573 aa8.17□□□□□ -1.1
CHD7-201ENST00000423902 PROSER1Q86XN7 944 aa8.17□□□□□ -1.1
CHD7-201ENST00000423902 CADM2Q8N3J6 435 aa8.17□□□□□ -1.1
CHD7-201ENST00000423902 ASB15Q8WXK1 588 aa8.17□□□□□ -1.1
CHD7-201ENST00000423902 ZNF689Q96CS4 500 aaPredicted RBP8.17□□□□□ -1.1
CHD7-201ENST00000423902 PGM2Q96G03 612 aa8.17□□□□□ -1.1
CHD7-201ENST00000423902 CAB39LQ9H9S4 337 aa8.17□□□□□ -1.1
CHD7-201ENST00000423902 ADAM30Q9UKF2 790 aa8.17□□□□□ -1.1
CHD7-201ENST00000423902 IRGMA1A4Y4 181 aa8.17□□□□□ -1.1
CHD7-201ENST00000423902 TIPRLO75663 272 aa8.17□□□□□ -1.1
CHD7-201ENST00000423902 CPA2P48052 419 aa8.17□□□□□ -1.1
CHD7-201ENST00000423902 RGS8P57771 180 aaPredicted RBP8.17□□□□□ -1.1
CHD7-201ENST00000423902 ZNF542PQ5EBM4 170 aa8.17□□□□□ -1.1
CHD7-201ENST00000423902 UNC5DQ6UXZ4 953 aa8.17□□□□□ -1.1
CHD7-201ENST00000423902 GPRIN1Q7Z2K8 1008 aa8.17□□□□□ -1.1
CHD7-201ENST00000423902 ZC3H3Q8IXZ2 948 aaKnown RBP8.17□□□□□ -1.1
CHD7-201ENST00000423902 SMIM31A0A1B0GVY4 71 aa8.17□□□□□ -1.1
CHD7-201ENST00000423902 OR6B1O95007 311 aa8.17□□□□□ -1.1
CHD7-201ENST00000423902 RNH1P13489 461 aaKnown RBP8.17□□□□□ -1.1
CHD7-201ENST00000423902 TCEA1P23193 301 aaKnown RBP8.17□□□□□ -1.1
CHD7-201ENST00000423902 SOX6P35712 828 aa8.17□□□□□ -1.1
CHD7-201ENST00000423902 DPY19L1Q2PZI1 675 aa8.17□□□□□ -1.1
CHD7-201ENST00000423902 DEF8Q6ZN54 512 aa8.17□□□□□ -1.1
CHD7-201ENST00000423902 OR1A2Q9Y585 309 aa8.17□□□□□ -1.1
CHD7-201ENST00000423902 GJE1A6NN92 205 aa8.17□□□□□ -1.1
CHD7-201ENST00000423902 DDX3YO15523 660 aaKnown RBP8.17□□□□□ -1.1
CHD7-201ENST00000423902 ICAM2P13598 275 aa8.17□□□□□ -1.1
CHD7-201ENST00000423902 ARMC8Q8IUR7 673 aa8.17□□□□□ -1.1
CHD7-201ENST00000423902 SPEM1Q8N4L4 309 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms