RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 ZNF555Q8NEP9 628 aa12.98□□□□□ -0.33
MCF2L-213ENST00000421756 ACDQ96AP0 544 aa12.98□□□□□ -0.33
MCF2L-213ENST00000421756 TMEM159Q96B96 161 aa12.98□□□□□ -0.33
MCF2L-213ENST00000421756 SCRN2Q96FV2 425 aa12.98□□□□□ -0.33
MCF2L-213ENST00000421756 ZDHHC3Q9NYG2 299 aa12.98□□□□□ -0.33
MCF2L-213ENST00000421756 ABCG2Q9UNQ0 655 aa12.98□□□□□ -0.33
MCF2L-213ENST00000421756 PITPNM1O00562 1244 aa12.97□□□□□ -0.33
MCF2L-213ENST00000421756 FPGTO14772 594 aa12.97□□□□□ -0.33
MCF2L-213ENST00000421756 GREM1O60565 184 aa12.97□□□□□ -0.33
MCF2L-213ENST00000421756 SLC16A8O95907 504 aa12.97□□□□□ -0.33
MCF2L-213ENST00000421756 LAMP1P11279 417 aa12.97□□□□□ -0.33
MCF2L-213ENST00000421756 PABPC1P11940 636 aaKnown RBP12.97□□□□□ -0.33
MCF2L-213ENST00000421756 CDH1P12830 882 aa12.97□□□□□ -0.33
MCF2L-213ENST00000421756 MAP2K4P45985 399 aa12.97□□□□□ -0.33
MCF2L-213ENST00000421756 MC1RQ01726 317 aa12.97□□□□□ -0.33
MCF2L-213ENST00000421756 ACSM2AQ08AH3 577 aa12.97□□□□□ -0.33
MCF2L-213ENST00000421756 RAB33AQ14088 237 aa12.97□□□□□ -0.33
MCF2L-213ENST00000421756 DAG1Q14118 895 aa12.97□□□□□ -0.33
MCF2L-213ENST00000421756 C5orf22Q49AR2 442 aa12.97□□□□□ -0.33
MCF2L-213ENST00000421756 ACSM2BQ68CK6 577 aa12.97□□□□□ -0.33
MCF2L-213ENST00000421756 TMEM220Q6QAJ8 160 aa12.97□□□□□ -0.33
MCF2L-213ENST00000421756 C1orf52Q8N6N3 182 aaKnown RBP12.97□□□□□ -0.33
MCF2L-213ENST00000421756 PSD4Q8NDX1 1056 aa12.97□□□□□ -0.33
MCF2L-213ENST00000421756 ZFAND2BQ8WV99 257 aa12.97□□□□□ -0.33
MCF2L-213ENST00000421756 KLK6Q92876 244 aa12.97□□□□□ -0.33
MCF2L-213ENST00000421756 SAMD11Q96NU1 681 aa12.97□□□□□ -0.33
MCF2L-213ENST00000421756 HTATIP2Q9BUP3 242 aa12.97□□□□□ -0.33
MCF2L-213ENST00000421756 NPLQ9BXD5 320 aaPredicted RBP12.97□□□□□ -0.33
MCF2L-213ENST00000421756 ROGDIQ9GZN7 287 aa12.97□□□□□ -0.33
MCF2L-213ENST00000421756 OR51B5Q9H339 312 aa12.97□□□□□ -0.33
MCF2L-213ENST00000421756 KIF17Q9P2E2 1029 aa12.97□□□□□ -0.33
MCF2L-213ENST00000421756 SNX8Q9Y5X2 465 aa12.97□□□□□ -0.33
MCF2L-213ENST00000421756 K7ESM1 405 aa12.97□□□□□ -0.33
MCF2L-213ENST00000421756 ANKRD28O15084 1053 aa12.97□□□□□ -0.33
MCF2L-213ENST00000421756 KLK8O60259 260 aa12.97□□□□□ -0.33
MCF2L-213ENST00000421756 ATP1B2P14415 290 aaPredicted RBP12.97□□□□□ -0.33
MCF2L-213ENST00000421756 EPORP19235 508 aa12.97□□□□□ -0.33
MCF2L-213ENST00000421756 GGT1P19440 569 aa12.97□□□□□ -0.33
MCF2L-213ENST00000421756 SOAT1P35610 550 aa12.97□□□□□ -0.33
MCF2L-213ENST00000421756 CRATP43155 626 aa12.97□□□□□ -0.33
MCF2L-213ENST00000421756 TPGS2Q68CL5 300 aa12.97□□□□□ -0.33
MCF2L-213ENST00000421756 MAGED4Q96JG8 741 aa12.97□□□□□ -0.33
MCF2L-213ENST00000421756 SGK2Q9HBY8 427 aa12.97□□□□□ -0.33
MCF2L-213ENST00000421756 IRAK4Q9NWZ3 460 aa12.97□□□□□ -0.33
MCF2L-213ENST00000421756 ETAA1Q9NY74 926 aa12.97□□□□□ -0.33
MCF2L-213ENST00000421756 VNN3Q9NY84 501 aa12.97□□□□□ -0.33
MCF2L-213ENST00000421756 C5AR2Q9P296 337 aa12.97□□□□□ -0.33
MCF2L-213ENST00000421756 HSFX1Q9UBD0 423 aa12.97□□□□□ -0.33
MCF2L-213ENST00000421756 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.97□□□□□ -0.33
MCF2L-213ENST00000421756 MAGEB17A8MXT2 336 aa12.97□□□□□ -0.33
MCF2L-213ENST00000421756 EVPLLA8MZ36 301 aa12.97□□□□□ -0.33
MCF2L-213ENST00000421756 AP1G1O43747 822 aa12.97□□□□□ -0.33
MCF2L-213ENST00000421756 FCGR1AP12314 374 aa12.97□□□□□ -0.33
MCF2L-213ENST00000421756 HTR1EP28566 365 aa12.97□□□□□ -0.33
MCF2L-213ENST00000421756 CARD16Q5EG05 197 aa12.97□□□□□ -0.33
MCF2L-213ENST00000421756 CATSPEREQ5SY80 951 aa12.97□□□□□ -0.33
MCF2L-213ENST00000421756 TMEM215Q68D42 235 aa12.97□□□□□ -0.33
MCF2L-213ENST00000421756 C16orf87Q6PH81 154 aa12.97□□□□□ -0.33
MCF2L-213ENST00000421756 TMC5Q6UXY8 1006 aa12.97□□□□□ -0.33
MCF2L-213ENST00000421756 ZDHHC21Q8IVQ6 265 aa12.97□□□□□ -0.33
MCF2L-213ENST00000421756 C8orf59Q8N0T1 100 aaPredicted RBP12.97□□□□□ -0.33
MCF2L-213ENST00000421756 CXXC1Q9P0U4 656 aaPredicted RBP12.97□□□□□ -0.33
MCF2L-213ENST00000421756 SLC28A1O00337 649 aa12.96□□□□□ -0.33
MCF2L-213ENST00000421756 ETHE1O95571 254 aa12.96□□□□□ -0.33
MCF2L-213ENST00000421756 KIR3DL1P43629 444 aa12.96□□□□□ -0.33
MCF2L-213ENST00000421756 SPINT3P49223 89 aa12.96□□□□□ -0.33
MCF2L-213ENST00000421756 RPS6KA3P51812 740 aa12.96□□□□□ -0.33
MCF2L-213ENST00000421756 PATL1Q86TB9 770 aaKnown RBP12.96□□□□□ -0.33
MCF2L-213ENST00000421756 PROSER1Q86XN7 944 aa12.96□□□□□ -0.33
MCF2L-213ENST00000421756 RAVER1Q8IY67 606 aaKnown RBP12.96□□□□□ -0.33
MCF2L-213ENST00000421756 PDPRQ8NCN5 879 aa12.96□□□□□ -0.33
MCF2L-213ENST00000421756 ZNF740Q8NDX6 193 aa12.96□□□□□ -0.33
MCF2L-213ENST00000421756 AMBRA1Q9C0C7 1298 aa12.96□□□□□ -0.33
MCF2L-213ENST00000421756 OR2AG1Q9H205 316 aa12.96□□□□□ -0.33
MCF2L-213ENST00000421756 TMEM98Q9Y2Y6 226 aa12.96□□□□□ -0.33
MCF2L-213ENST00000421756 CKAP5Q14008 2032 aa12.96□□□□□ -0.33
MCF2L-213ENST00000421756 POLR2EP19388 210 aaKnown RBP12.96□□□□□ -0.33
MCF2L-213ENST00000421756 MAGP20916 626 aa12.96□□□□□ -0.33
MCF2L-213ENST00000421756 TGFBR1P36897 503 aa12.96□□□□□ -0.33
MCF2L-213ENST00000421756 MASP1P48740 699 aa12.96□□□□□ -0.33
MCF2L-213ENST00000421756 FRG2Q64ET8 278 aa12.96□□□□□ -0.33
MCF2L-213ENST00000421756 GDPD4Q6W3E5 623 aa12.96□□□□□ -0.33
MCF2L-213ENST00000421756 CEP68Q76N32 757 aa12.96□□□□□ -0.33
MCF2L-213ENST00000421756 FAM20CQ8IXL6 584 aa12.96□□□□□ -0.33
MCF2L-213ENST00000421756 MICU2Q8IYU8 434 aa12.96□□□□□ -0.33
MCF2L-213ENST00000421756 MMP21Q8N119 569 aa12.96□□□□□ -0.33
MCF2L-213ENST00000421756 SMYD1Q8NB12 490 aa12.96□□□□□ -0.33
MCF2L-213ENST00000421756 AP2M1Q96CW1 435 aa12.96□□□□□ -0.33
MCF2L-213ENST00000421756 FRG2BQ96QU4 278 aa12.96□□□□□ -0.33
MCF2L-213ENST00000421756 UGT2B28Q9BY64 529 aa12.96□□□□□ -0.33
MCF2L-213ENST00000421756 HEBP1Q9NRV9 189 aa12.96□□□□□ -0.33
MCF2L-213ENST00000421756 RHCGQ9UBD6 479 aa12.96□□□□□ -0.33
MCF2L-213ENST00000421756 TESMINQ9Y4I5 508 aa12.96□□□□□ -0.33
MCF2L-213ENST00000421756 CLIC1O00299 241 aa12.96□□□□□ -0.34
MCF2L-213ENST00000421756 INMTO95050 263 aa12.96□□□□□ -0.34
MCF2L-213ENST00000421756 PRSS23O95084 383 aa12.96□□□□□ -0.34
MCF2L-213ENST00000421756 SYN1P17600 705 aa12.96□□□□□ -0.34
MCF2L-213ENST00000421756 MYF6P23409 242 aa12.96□□□□□ -0.34
MCF2L-213ENST00000421756 PSMB9P28065 219 aa12.96□□□□□ -0.34
MCF2L-213ENST00000421756 NNMTP40261 264 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms