RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 PGAP3Q96FM1 320 aaPredicted RBP7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 COLEC11Q9BWP8 271 aa7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 CXCL16Q9H2A7 254 aa7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 IL1RAPQ9NPH3 570 aa7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 TMEM39AQ9NV64 488 aa7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 C1orf109Q9NX04 203 aa7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 DDIT4Q9NX09 232 aa7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 MIOSQ9NXC5 875 aa7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 MROH6A6NGR9 719 aa7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 OR51F1A6NGY5 319 aa7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 ARVCFO00192 962 aa7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 SEC14L5O43304 696 aa7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 BEST1O76090 585 aa7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 OR4F21O95013 312 aa7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 CPN2P22792 545 aa7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 CHMP24386 653 aa7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 AGTR2P50052 363 aa7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 CRISP3P54108 245 aa7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 ARPP19P56211 112 aa7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 CAMK2GQ13555 558 aaPredicted RBP7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 FAM171A1Q5VUB5 890 aa7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 TIGD7Q6NT04 549 aaPredicted RBP7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 FAHD1Q6P587 224 aa7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 CCDC149Q6ZUS6 474 aa7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 ARHGAP12Q8IWW6 846 aa7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 PHACTR4Q8IZ21 702 aa7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 ATG16L2Q8NAA4 619 aa7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 OR56A4Q8NGH8 313 aa7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 NECTIN4Q96NY8 510 aa7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 BBS2Q9BXC9 721 aa7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 C11orf54Q9H0W9 315 aaPredicted RBP7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 ATP13A1Q9HD20 1204 aa7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 ABCB8Q9NUT2 735 aa7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 GALPQ9UBC7 116 aa7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 SLC23A1Q9UHI7 598 aa7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 ADAMTS5Q9UNA0 930 aa7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 TLR6Q9Y2C9 796 aa7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 POLR3HQ9Y535 204 aaPredicted RBP7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 NYNRINQ9P2P1 1898 aaKnown RBP7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 TRBV5-3A0A0A0MS03 114 aa7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 EFCAB10A6NFE3 127 aa7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 EPN2O95208 641 aa7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 TALDO1P37837 337 aa7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 GZMMP51124 257 aa7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 MFSD13AQ14CX5 517 aa7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 PM20D1Q6GTS8 502 aa7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 KDELC1Q6UW63 502 aa7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 PAMR1Q6UXH9 720 aa7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 NLRP8Q86W28 1048 aa7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 ATCAYQ86WG3 371 aa7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 FAM181AQ8N9Y4 354 aa7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 CRELD1Q96HD1 420 aa7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 MRPL9Q9BYD2 267 aaKnown RBP7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 DERL2Q9GZP9 239 aa7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 AMBNQ9NP70 447 aa7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 RBM22Q9NW64 420 aaKnown RBP eCLIP7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 HSPB11Q9Y547 144 aa7.82□□□□□ -1.16
HMGXB4-202ENST00000418170 SLC9A3R1O14745 358 aaPredicted RBP7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 PLD2O14939 933 aa7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 KLK8O60259 260 aa7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 ITGB1P05556 798 aa7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 STSP08842 583 aa7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 NPR3P17342 541 aa7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 ALAS2P22557 587 aa7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 MGAT3Q09327 533 aa7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 FAM174BQ3ZCQ3 159 aa7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 ZBTB37Q5TC79 503 aa7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 KRT73Q86Y46 540 aa7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 LAX1Q8IWV1 398 aa7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 NIM1KQ8IY84 436 aa7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 DTX3Q8N9I9 347 aa7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 MTMR14Q8NCE2 650 aa7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 METTL2AQ96IZ6 378 aaKnown RBP7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 TTPALQ9BTX7 342 aa7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 C2orf49Q9BVC5 232 aaPredicted RBP7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 GABARAPL3Q9BY60 117 aa7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 TKTL2Q9H0I9 626 aa7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 STOML2Q9UJZ1 356 aa7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 IKZF3Q9UKT9 509 aa7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 SAMD4AQ9UPU9 718 aaKnown RBP7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 LAMA3Q16787 3333 aa7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 PDCD11Q14690 1871 aaKnown RBP7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 UBA6A0AVT1 1052 aaPredicted RBP7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 YJEFN3A6XGL0 299 aa7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 VPS26AO75436 327 aa7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 HSMCR30P0CW71 290 aa7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 SLC2A3P11169 496 aa7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 ATF4P18848 351 aaPredicted RBP7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 KIR2DL3P43628 341 aa7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 MLLT6P55198 1093 aaPredicted RBP7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 SRP54P61011 504 aaKnown RBP7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 PSPHP78330 225 aa7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 DAB2P98082 770 aa7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 EIF2B5Q13144 721 aaKnown RBP7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 SNTA1Q13424 505 aa7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 TP53BP2Q13625 1128 aa7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 NR6A1Q15406 480 aa7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 TSNQ15631 228 aaKnown RBP7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 PUS10Q3MIT2 529 aaKnown RBP7.81□□□□□ -1.16
HMGXB4-202ENST00000418170 RFTN2Q52LD8 501 aaPredicted RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms