RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 UBE2ZQ9H832 354 aaPredicted RBP16.27■□□□□ 0.2
SSBP3-205ENST00000417664 SLC23A2Q9UGH3 650 aa16.27■□□□□ 0.2
SSBP3-205ENST00000417664 MMP17Q9ULZ9 603 aa16.27■□□□□ 0.2
SSBP3-205ENST00000417664 DYRK1BQ9Y463 629 aa16.27■□□□□ 0.2
SSBP3-205ENST00000417664 NUMA1Q14980 2115 aa16.27■□□□□ 0.19
SSBP3-205ENST00000417664 KRT87PA6NCN2 255 aa16.27■□□□□ 0.19
SSBP3-205ENST00000417664 FXYD1O00168 92 aa16.27■□□□□ 0.19
SSBP3-205ENST00000417664 CACNB4O00305 520 aaPredicted RBP16.27■□□□□ 0.19
SSBP3-205ENST00000417664 STAMBPO95630 424 aa16.27■□□□□ 0.19
SSBP3-205ENST00000417664 SLC35G4P0C7Q5 338 aa16.27■□□□□ 0.19
SSBP3-205ENST00000417664 ERGP11308 486 aa16.27■□□□□ 0.19
SSBP3-205ENST00000417664 HSD17B1P14061 328 aa16.27■□□□□ 0.19
SSBP3-205ENST00000417664 IGFALSP35858 605 aa16.27■□□□□ 0.19
SSBP3-205ENST00000417664 SLC7A2P52569 658 aa16.27■□□□□ 0.19
SSBP3-205ENST00000417664 CLNS1AP54105 237 aaKnown RBP16.27■□□□□ 0.19
SSBP3-205ENST00000417664 LAPTM5Q13571 262 aa16.27■□□□□ 0.19
SSBP3-205ENST00000417664 CCINQ13939 588 aa16.27■□□□□ 0.19
SSBP3-205ENST00000417664 USP39Q53GS9 565 aaKnown RBP16.27■□□□□ 0.19
SSBP3-205ENST00000417664 PAGE2BQ5JRK9 111 aa16.27■□□□□ 0.19
SSBP3-205ENST00000417664 LAYNQ6UX15 382 aa16.27■□□□□ 0.19
SSBP3-205ENST00000417664 SLCO4C1Q6ZQN7 724 aa16.27■□□□□ 0.19
SSBP3-205ENST00000417664 LPCAT2Q7L5N7 544 aa16.27■□□□□ 0.19
SSBP3-205ENST00000417664 TRIM69Q86WT6 500 aa16.27■□□□□ 0.19
SSBP3-205ENST00000417664 LRRC56Q8IYG6 542 aaPredicted RBP16.27■□□□□ 0.19
SSBP3-205ENST00000417664 TBC1D21Q8IYX1 336 aa16.27■□□□□ 0.19
SSBP3-205ENST00000417664 DNAJB8Q8NHS0 232 aa16.27■□□□□ 0.19
SSBP3-205ENST00000417664 FAM3CQ92520 227 aa16.27■□□□□ 0.19
SSBP3-205ENST00000417664 MTFMTQ96DP5 389 aaKnown RBP16.27■□□□□ 0.19
SSBP3-205ENST00000417664 APOOQ9BUR5 198 aa16.27■□□□□ 0.19
SSBP3-205ENST00000417664 OSBPL6Q9BZF3 934 aa16.27■□□□□ 0.19
SSBP3-205ENST00000417664 CCDC177Q9NQR7 707 aaPredicted RBP16.27■□□□□ 0.19
SSBP3-205ENST00000417664 SLC2A4RGQ9NR83 387 aa16.27■□□□□ 0.19
SSBP3-205ENST00000417664 SPATA6Q9NWH7 488 aaPredicted RBP16.27■□□□□ 0.19
SSBP3-205ENST00000417664 SPATA7Q9P0W8 599 aa16.27■□□□□ 0.19
SSBP3-205ENST00000417664 PCYT1BQ9Y5K3 369 aaPredicted RBP16.27■□□□□ 0.19
SSBP3-205ENST00000417664 PRORSD1PA6NEY8 169 aa16.26■□□□□ 0.19
SSBP3-205ENST00000417664 BCKDHAP12694 445 aa16.26■□□□□ 0.19
SSBP3-205ENST00000417664 NPPBP16860 134 aa16.26■□□□□ 0.19
SSBP3-205ENST00000417664 CD22P20273 847 aa16.26■□□□□ 0.19
SSBP3-205ENST00000417664 CTBSQ01459 385 aa16.26■□□□□ 0.19
SSBP3-205ENST00000417664 ATG9BQ674R7 924 aa16.26■□□□□ 0.19
SSBP3-205ENST00000417664 LRRC74BQ6ZQY2 392 aa16.26■□□□□ 0.19
SSBP3-205ENST00000417664 LIX1Q8N485 282 aa16.26■□□□□ 0.19
SSBP3-205ENST00000417664 PPFIBP2Q8ND30 876 aa16.26■□□□□ 0.19
SSBP3-205ENST00000417664 RPLP0P6Q8NHW5 317 aa16.26■□□□□ 0.19
SSBP3-205ENST00000417664 VPS33AQ96AX1 596 aa16.26■□□□□ 0.19
SSBP3-205ENST00000417664 SCARF2Q96GP6 870 aaPredicted RBP16.26■□□□□ 0.19
SSBP3-205ENST00000417664 FCRL1Q96LA6 429 aa16.26■□□□□ 0.19
SSBP3-205ENST00000417664 HAUS8Q9BT25 410 aa16.26■□□□□ 0.19
SSBP3-205ENST00000417664 PCBD2Q9H0N5 130 aa16.26■□□□□ 0.19
SSBP3-205ENST00000417664 SLC6A17Q9H1V8 727 aa16.26■□□□□ 0.19
SSBP3-205ENST00000417664 TRIT1Q9H3H1 467 aaKnown RBP16.26■□□□□ 0.19
SSBP3-205ENST00000417664 VPS29Q9UBQ0 182 aa16.26■□□□□ 0.19
SSBP3-205ENST00000417664 C15orf41Q9Y2V0 281 aa16.26■□□□□ 0.19
SSBP3-205ENST00000417664 PRKAB1Q9Y478 270 aa16.26■□□□□ 0.19
SSBP3-205ENST00000417664 ATG2BQ96BY7 2078 aa16.26■□□□□ 0.19
SSBP3-205ENST00000417664 ASPDHA6ND91 283 aa16.25■□□□□ 0.19
SSBP3-205ENST00000417664 PRR23AA6NEV1 266 aa16.25■□□□□ 0.19
SSBP3-205ENST00000417664 MAN2B1O00754 1011 aa16.25■□□□□ 0.19
SSBP3-205ENST00000417664 DNAJA2O60884 412 aa16.25■□□□□ 0.19
SSBP3-205ENST00000417664 CEACAM5P06731 702 aa16.25■□□□□ 0.19
SSBP3-205ENST00000417664 AMD1P17707 334 aa16.25■□□□□ 0.19
SSBP3-205ENST00000417664 SLC6A2P23975 617 aa16.25■□□□□ 0.19
SSBP3-205ENST00000417664 NEK2P51955 445 aa16.25■□□□□ 0.19
SSBP3-205ENST00000417664 CLDN8P56748 225 aa16.25■□□□□ 0.19
SSBP3-205ENST00000417664 KIAA1024LP59773 190 aa16.25■□□□□ 0.19
SSBP3-205ENST00000417664 MS4A2Q01362 244 aa16.25■□□□□ 0.19
SSBP3-205ENST00000417664 BNIP2Q12982 314 aa16.25■□□□□ 0.19
SSBP3-205ENST00000417664 HIST2H2ACQ16777 129 aaPredicted RBP16.25■□□□□ 0.19
SSBP3-205ENST00000417664 TIGD2Q4W5G0 525 aa16.25■□□□□ 0.19
SSBP3-205ENST00000417664 HIST2H2AA3Q6FI13 130 aa16.25■□□□□ 0.19
SSBP3-205ENST00000417664 CAPRIN2Q6IMN6 1127 aaKnown RBP16.25■□□□□ 0.19
SSBP3-205ENST00000417664 MED27Q6P2C8 311 aa16.25■□□□□ 0.19
SSBP3-205ENST00000417664 LCTLQ6UWM7 567 aa16.25■□□□□ 0.19
SSBP3-205ENST00000417664 SLC15A3Q8IY34 581 aa16.25■□□□□ 0.19
SSBP3-205ENST00000417664 RAB42Q8N4Z0 105 aa16.25■□□□□ 0.19
SSBP3-205ENST00000417664 KLK6Q92876 244 aa16.25■□□□□ 0.19
SSBP3-205ENST00000417664 NEIL2Q969S2 332 aa16.25■□□□□ 0.19
SSBP3-205ENST00000417664 UBE2E3Q969T4 207 aa16.25■□□□□ 0.19
SSBP3-205ENST00000417664 MUC13Q9H3R2 512 aa16.25■□□□□ 0.19
SSBP3-205ENST00000417664 CLMPQ9H6B4 373 aa16.25■□□□□ 0.19
SSBP3-205ENST00000417664 SGK2Q9HBY8 427 aa16.25■□□□□ 0.19
SSBP3-205ENST00000417664 NMRK1Q9NWW6 199 aa16.25■□□□□ 0.19
SSBP3-205ENST00000417664 MAPRE3Q9UPY8 281 aa16.25■□□□□ 0.19
SSBP3-205ENST00000417664 TSC22D4Q9Y3Q8 395 aa16.25■□□□□ 0.19
SSBP3-205ENST00000417664 SZT2Q5T011 3432 aa16.25■□□□□ 0.19
SSBP3-205ENST00000417664 KANSL1LA0AUZ9 987 aa16.24■□□□□ 0.19
SSBP3-205ENST00000417664 LRRC72A6NJI9 287 aa16.24■□□□□ 0.19
SSBP3-205ENST00000417664 C9JVG2 144 aa16.24■□□□□ 0.19
SSBP3-205ENST00000417664 PRMT3O60678 531 aa16.24■□□□□ 0.19
SSBP3-205ENST00000417664 C1GALT1C1LP0DN25 315 aa16.24■□□□□ 0.19
SSBP3-205ENST00000417664 SRFP11831 508 aa16.24■□□□□ 0.19
SSBP3-205ENST00000417664 NDUFV2P19404 249 aa16.24■□□□□ 0.19
SSBP3-205ENST00000417664 CYP2A13Q16696 494 aa16.24■□□□□ 0.19
SSBP3-205ENST00000417664 SLC44A4Q53GD3 710 aa16.24■□□□□ 0.19
SSBP3-205ENST00000417664 PAGE3Q5JUK9 113 aa16.24■□□□□ 0.19
SSBP3-205ENST00000417664 HID1Q8IV36 788 aa16.24■□□□□ 0.19
SSBP3-205ENST00000417664 RNF148Q8N7C7 305 aa16.24■□□□□ 0.19
SSBP3-205ENST00000417664 SPDYE1Q8NFV5 336 aaPredicted RBP16.24■□□□□ 0.19
SSBP3-205ENST00000417664 OR7G3Q8NG95 312 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms