RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 COG4Q9H9E3 785 aa17.35■□□□□ 0.37
VCP-202ENST00000417448 IMP3Q9NV31 184 aaKnown RBP17.35■□□□□ 0.37
VCP-202ENST00000417448 C5AR2Q9P296 337 aa17.35■□□□□ 0.37
VCP-202ENST00000417448 COPG1Q9Y678 874 aaKnown RBP17.35■□□□□ 0.37
VCP-202ENST00000417448 PRMT5O14744 637 aaPredicted RBP17.34■□□□□ 0.37
VCP-202ENST00000417448 NIPSNAP2O75323 286 aa17.34■□□□□ 0.37
VCP-202ENST00000417448 CCR7P32248 378 aa17.34■□□□□ 0.37
VCP-202ENST00000417448 GPR19Q15760 415 aa17.34■□□□□ 0.37
VCP-202ENST00000417448 AARS2Q5JTZ9 985 aaKnown RBP17.34■□□□□ 0.37
VCP-202ENST00000417448 SPANXN3Q5MJ09 141 aa17.34■□□□□ 0.37
VCP-202ENST00000417448 AGAP9Q5VTM2 703 aa17.34■□□□□ 0.37
VCP-202ENST00000417448 CNSTQ6PJW8 725 aa17.34■□□□□ 0.37
VCP-202ENST00000417448 CUZD1Q86UP6 607 aa17.34■□□□□ 0.37
VCP-202ENST00000417448 TMEM126BQ8IUX1 230 aa17.34■□□□□ 0.37
VCP-202ENST00000417448 VRK3Q8IV63 474 aa17.34■□□□□ 0.37
VCP-202ENST00000417448 HM13Q8TCT9 377 aa17.34■□□□□ 0.37
VCP-202ENST00000417448 IFT81Q8WYA0 676 aa17.34■□□□□ 0.37
VCP-202ENST00000417448 ZNF501Q96CX3 271 aaPredicted RBP17.34■□□□□ 0.37
VCP-202ENST00000417448 CXorf40BQ96DE9 158 aa17.34■□□□□ 0.37
VCP-202ENST00000417448 C12orf66Q96MD2 445 aa17.34■□□□□ 0.37
VCP-202ENST00000417448 BIRC8Q96P09 236 aa17.34■□□□□ 0.37
VCP-202ENST00000417448 ILKAPQ9H0C8 392 aaPredicted RBP17.34■□□□□ 0.37
VCP-202ENST00000417448 PPANQ9NQ55 473 aaKnown RBP17.34■□□□□ 0.37
VCP-202ENST00000417448 PCDHGA10Q9Y5H3 936 aa17.34■□□□□ 0.37
VCP-202ENST00000417448 E7ESA3 106 aa17.33■□□□□ 0.36
VCP-202ENST00000417448 SMAPO00193 183 aa17.33■□□□□ 0.36
VCP-202ENST00000417448 E2F3O00716 465 aa17.33■□□□□ 0.36
VCP-202ENST00000417448 KCNJ13O60928 360 aa17.33■□□□□ 0.36
VCP-202ENST00000417448 HAUS5O94927 633 aa17.33■□□□□ 0.36
VCP-202ENST00000417448 RAB40ALP0C0E4 278 aa17.33■□□□□ 0.36
VCP-202ENST00000417448 PPARGP37231 505 aaPredicted RBP17.33■□□□□ 0.36
VCP-202ENST00000417448 KYNUQ16719 465 aa17.33■□□□□ 0.36
VCP-202ENST00000417448 TYSND1Q2T9J0 566 aa17.33■□□□□ 0.36
VCP-202ENST00000417448 DNTTIP2Q5QJE6 756 aaKnown RBP17.33■□□□□ 0.36
VCP-202ENST00000417448 PLEKHS1Q5SXH7 462 aa17.33■□□□□ 0.36
VCP-202ENST00000417448 ZNF549Q6P9A3 640 aa17.33■□□□□ 0.36
VCP-202ENST00000417448 FAM198BQ6UWH4 519 aa17.33■□□□□ 0.36
VCP-202ENST00000417448 IGFL3Q6UXB1 125 aa17.33■□□□□ 0.36
VCP-202ENST00000417448 DSELQ8IZU8 1212 aa17.33■□□□□ 0.36
VCP-202ENST00000417448 CEP112Q8N8E3 955 aa17.33■□□□□ 0.36
VCP-202ENST00000417448 LURAP1Q96LR2 239 aa17.33■□□□□ 0.36
VCP-202ENST00000417448 NLNQ9BYT8 704 aa17.33■□□□□ 0.36
VCP-202ENST00000417448 FBXO5Q9UKT4 447 aa17.33■□□□□ 0.36
VCP-202ENST00000417448 SNRNP200O75643 2136 aaKnown RBP17.32■□□□□ 0.36
VCP-202ENST00000417448 BHMG1C9JSJ3 638 aaPredicted RBP17.32■□□□□ 0.36
VCP-202ENST00000417448 FTH1P02794 183 aa17.32■□□□□ 0.36
VCP-202ENST00000417448 RHOXF2BP0C7M4 288 aa17.32■□□□□ 0.36
VCP-202ENST00000417448 SLC35G4P0C7Q5 338 aa17.32■□□□□ 0.36
VCP-202ENST00000417448 OGNP20774 298 aaKnown RBP17.32■□□□□ 0.36
VCP-202ENST00000417448 GABRB3P28472 473 aa17.32■□□□□ 0.36
VCP-202ENST00000417448 SSTR1P30872 391 aa17.32■□□□□ 0.36
VCP-202ENST00000417448 DEKP35659 375 aaKnown RBP17.32■□□□□ 0.36
VCP-202ENST00000417448 HALP42357 657 aa17.32■□□□□ 0.36
VCP-202ENST00000417448 PGGT1BP53609 377 aa17.32■□□□□ 0.36
VCP-202ENST00000417448 RRADP55042 308 aa17.32■□□□□ 0.36
VCP-202ENST00000417448 TUBB4BP68371 445 aa17.32■□□□□ 0.36
VCP-202ENST00000417448 UBAP2Q5T6F2 1119 aaKnown RBP17.32■□□□□ 0.36
VCP-202ENST00000417448 STEAP4Q687X5 459 aa17.32■□□□□ 0.36
VCP-202ENST00000417448 WASH2PQ6VEQ5 465 aa17.32■□□□□ 0.36
VCP-202ENST00000417448 D2HGDHQ8N465 521 aa17.32■□□□□ 0.36
VCP-202ENST00000417448 CERS2Q96G23 380 aa17.32■□□□□ 0.36
VCP-202ENST00000417448 LRFN5Q96NI6 719 aa17.32■□□□□ 0.36
VCP-202ENST00000417448 RHOXF2Q9BQY4 288 aa17.32■□□□□ 0.36
VCP-202ENST00000417448 OR52A5Q9H2C5 316 aa17.32■□□□□ 0.36
VCP-202ENST00000417448 ZBTB20Q9HC78 741 aaPredicted RBP17.32■□□□□ 0.36
VCP-202ENST00000417448 ZDHHC18Q9NUE0 388 aa17.32■□□□□ 0.36
VCP-202ENST00000417448 ACSL5Q9ULC5 683 aa17.32■□□□□ 0.36
VCP-202ENST00000417448 OSGIN2Q9Y236 505 aa17.32■□□□□ 0.36
VCP-202ENST00000417448 PCM1Q15154 2024 aa17.31■□□□□ 0.36
VCP-202ENST00000417448 PCNX1Q96RV3 2341 aa17.31■□□□□ 0.36
VCP-202ENST00000417448 C17orf113A0A1B0GUU1 675 aa17.31■□□□□ 0.36
VCP-202ENST00000417448 SLC5A10A0PJK1 596 aa17.31■□□□□ 0.36
VCP-202ENST00000417448 ESPNB1AK53 854 aa17.31■□□□□ 0.36
VCP-202ENST00000417448 MEN1O00255 615 aa17.31■□□□□ 0.36
VCP-202ENST00000417448 TTC4O95801 387 aa17.31■□□□□ 0.36
VCP-202ENST00000417448 MTHFD1P11586 935 aaKnown RBP17.31■□□□□ 0.36
VCP-202ENST00000417448 RORAP35398 523 aa17.31■□□□□ 0.36
VCP-202ENST00000417448 GLRBP48167 497 aa17.31■□□□□ 0.36
VCP-202ENST00000417448 PER3P56645 1201 aa17.31■□□□□ 0.36
VCP-202ENST00000417448 HSD11B2P80365 405 aa17.31■□□□□ 0.36
VCP-202ENST00000417448 HSPA14Q0VDF9 509 aa17.31■□□□□ 0.36
VCP-202ENST00000417448 ABRQ12979 859 aa17.31■□□□□ 0.36
VCP-202ENST00000417448 SYTL3Q4VX76 610 aa17.31■□□□□ 0.36
VCP-202ENST00000417448 ARMC3Q5W041 872 aa17.31■□□□□ 0.36
VCP-202ENST00000417448 MYO7BQ6PIF6 2116 aa17.31■□□□□ 0.36
VCP-202ENST00000417448 Q6ZS92 163 aa17.31■□□□□ 0.36
VCP-202ENST00000417448 RBM12BQ8IXT5 1001 aaKnown RBP17.31■□□□□ 0.36
VCP-202ENST00000417448 PYROXD1Q8WU10 500 aa17.31■□□□□ 0.36
VCP-202ENST00000417448 FERD3LQ96RJ6 166 aa17.31■□□□□ 0.36
VCP-202ENST00000417448 TCF12Q99081 682 aa17.31■□□□□ 0.36
VCP-202ENST00000417448 SLC30A3Q99726 388 aa17.31■□□□□ 0.36
VCP-202ENST00000417448 NAT9Q9BTE0 207 aa17.31■□□□□ 0.36
VCP-202ENST00000417448 ZNF552Q9H707 407 aaPredicted RBP17.31■□□□□ 0.36
VCP-202ENST00000417448 VPS37BQ9H9H4 285 aa17.31■□□□□ 0.36
VCP-202ENST00000417448 CIDEBQ9UHD4 219 aa17.31■□□□□ 0.36
VCP-202ENST00000417448 GNPTGQ9UJJ9 305 aa17.31■□□□□ 0.36
VCP-202ENST00000417448 ITGB1BP2Q9UKP3 347 aa17.31■□□□□ 0.36
VCP-202ENST00000417448 NAV3Q8IVL0 2385 aa17.31■□□□□ 0.36
VCP-202ENST00000417448 DOCK10Q96BY6 2186 aa17.3■□□□□ 0.36
VCP-202ENST00000417448 ZNF500O60304 480 aaPredicted RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms