RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 AKAP11Q9UKA4 1901 aa12.61□□□□□ -0.39
SCN1B-202ENST00000415950 NEDD8-MDP1E9PL57 170 aa12.61□□□□□ -0.39
SCN1B-202ENST00000415950 ADAMDEC1O15204 470 aa12.61□□□□□ -0.39
SCN1B-202ENST00000415950 CLDN11O75508 207 aa12.61□□□□□ -0.39
SCN1B-202ENST00000415950 SLC25A12O75746 678 aa12.61□□□□□ -0.39
SCN1B-202ENST00000415950 HAPLN1P10915 354 aaPredicted RBP12.61□□□□□ -0.39
SCN1B-202ENST00000415950 CDH1P12830 882 aa12.61□□□□□ -0.39
SCN1B-202ENST00000415950 THOC7Q6I9Y2 204 aaKnown RBP12.61□□□□□ -0.39
SCN1B-202ENST00000415950 MAVSQ7Z434 540 aa12.61□□□□□ -0.39
SCN1B-202ENST00000415950 CFAP206Q8IYR0 622 aa12.61□□□□□ -0.39
SCN1B-202ENST00000415950 LRRC20Q8TCA0 184 aa12.61□□□□□ -0.39
SCN1B-202ENST00000415950 BARD1Q99728 777 aaKnown RBP12.61□□□□□ -0.39
SCN1B-202ENST00000415950 ERVK-18Q9QC07 812 aa12.61□□□□□ -0.39
SCN1B-202ENST00000415950 BAIAP2Q9UQB8 552 aa12.61□□□□□ -0.39
SCN1B-202ENST00000415950 SLC22A2O15244 555 aa12.6□□□□□ -0.39
SCN1B-202ENST00000415950 MID1O15344 667 aa12.6□□□□□ -0.39
SCN1B-202ENST00000415950 ZW10O43264 779 aa12.6□□□□□ -0.39
SCN1B-202ENST00000415950 ABCB7O75027 752 aa12.6□□□□□ -0.39
SCN1B-202ENST00000415950 PENKP01210 267 aaPredicted RBP12.6□□□□□ -0.39
SCN1B-202ENST00000415950 KCNQ1P51787 676 aa12.6□□□□□ -0.39
SCN1B-202ENST00000415950 PLA2G16P53816 162 aa12.6□□□□□ -0.39
SCN1B-202ENST00000415950 INHBCP55103 352 aa12.6□□□□□ -0.39
SCN1B-202ENST00000415950 RELAQ04206 551 aa12.6□□□□□ -0.39
SCN1B-202ENST00000415950 GALNT2Q10471 571 aa12.6□□□□□ -0.39
SCN1B-202ENST00000415950 C6orf136Q5SQH8 315 aa12.6□□□□□ -0.39
SCN1B-202ENST00000415950 C6orf141Q5SZD1 244 aa12.6□□□□□ -0.39
SCN1B-202ENST00000415950 FAM91A1Q658Y4 838 aa12.6□□□□□ -0.39
SCN1B-202ENST00000415950 CES5AQ6NT32 575 aa12.6□□□□□ -0.39
SCN1B-202ENST00000415950 FRRS1Q6ZNA5 592 aa12.6□□□□□ -0.39
SCN1B-202ENST00000415950 AGMOQ6ZNB7 445 aa12.6□□□□□ -0.39
SCN1B-202ENST00000415950 OR10H4Q8NGA5 316 aa12.6□□□□□ -0.39
SCN1B-202ENST00000415950 OR52B6Q8NGF0 335 aa12.6□□□□□ -0.39
SCN1B-202ENST00000415950 SLC38A4Q969I6 547 aa12.6□□□□□ -0.39
SCN1B-202ENST00000415950 FUNDC2Q9BWH2 189 aa12.6□□□□□ -0.39
SCN1B-202ENST00000415950 SPIN1Q9Y657 262 aaPredicted RBP12.6□□□□□ -0.39
SCN1B-202ENST00000415950 DNMT3AQ9Y6K1 912 aaPredicted RBP12.6□□□□□ -0.39
SCN1B-202ENST00000415950 ZFP37Q9Y6Q3 630 aaPredicted RBP12.6□□□□□ -0.39
SCN1B-202ENST00000415950 RPLP0P05388 317 aaKnown RBP12.6□□□□□ -0.39
SCN1B-202ENST00000415950 TACR2P21452 398 aa12.6□□□□□ -0.39
SCN1B-202ENST00000415950 CDKN2DP55273 166 aa12.6□□□□□ -0.39
SCN1B-202ENST00000415950 TXNL4AP83876 142 aaKnown RBP12.6□□□□□ -0.39
SCN1B-202ENST00000415950 MC1RQ01726 317 aa12.6□□□□□ -0.39
SCN1B-202ENST00000415950 GRB14Q14449 540 aa12.6□□□□□ -0.39
SCN1B-202ENST00000415950 UNC50Q53HI1 259 aa12.6□□□□□ -0.39
SCN1B-202ENST00000415950 OR5AK3PQ8NH89 298 aa12.6□□□□□ -0.39
SCN1B-202ENST00000415950 EHD1Q9H4M9 534 aa12.6□□□□□ -0.39
SCN1B-202ENST00000415950 C1orf109Q9NX04 203 aa12.6□□□□□ -0.39
SCN1B-202ENST00000415950 CFAP97Q9P2B7 532 aa12.6□□□□□ -0.39
SCN1B-202ENST00000415950 GULP1Q9UBP9 304 aa12.6□□□□□ -0.39
SCN1B-202ENST00000415950 USP22Q9UPT9 525 aa12.6□□□□□ -0.39
SCN1B-202ENST00000415950 NWD2Q9ULI1 1742 aa12.6□□□□□ -0.39
SCN1B-202ENST00000415950 OR6C70A6NIJ9 312 aa12.6□□□□□ -0.39
SCN1B-202ENST00000415950 MCIDASD6RGH6 385 aa12.6□□□□□ -0.39
SCN1B-202ENST00000415950 CEP290O15078 2479 aa12.6□□□□□ -0.39
SCN1B-202ENST00000415950 VILLO15195 856 aa12.6□□□□□ -0.39
SCN1B-202ENST00000415950 GADD45GO95257 159 aa12.6□□□□□ -0.39
SCN1B-202ENST00000415950 GLDCP23378 1020 aa12.6□□□□□ -0.39
SCN1B-202ENST00000415950 DSC3Q14574 896 aa12.6□□□□□ -0.39
SCN1B-202ENST00000415950 CMPK2Q5EBM0 449 aa12.6□□□□□ -0.39
SCN1B-202ENST00000415950 SCAIQ8N9R8 606 aa12.6□□□□□ -0.39
SCN1B-202ENST00000415950 PAAF1Q9BRP4 392 aa12.6□□□□□ -0.39
SCN1B-202ENST00000415950 RNF208Q9H0X6 261 aa12.6□□□□□ -0.39
SCN1B-202ENST00000415950 POLR3BQ9NW08 1133 aaPredicted RBP12.6□□□□□ -0.39
SCN1B-202ENST00000415950 DERAQ9Y315 318 aa12.6□□□□□ -0.39
SCN1B-202ENST00000415950 PCDHB1Q9Y5F3 818 aa12.6□□□□□ -0.39
SCN1B-202ENST00000415950 HS3ST4Q9Y661 456 aa12.6□□□□□ -0.39
SCN1B-202ENST00000415950 GNB5O14775 395 aa12.6□□□□□ -0.39
SCN1B-202ENST00000415950 MITFO75030 526 aaPredicted RBP12.6□□□□□ -0.39
SCN1B-202ENST00000415950 APOL3O95236 402 aa12.6□□□□□ -0.39
SCN1B-202ENST00000415950 MAPK12P53778 367 aa12.6□□□□□ -0.39
SCN1B-202ENST00000415950 ARPC4P59998 168 aa12.6□□□□□ -0.39
SCN1B-202ENST00000415950 SKP1P63208 163 aa12.6□□□□□ -0.39
SCN1B-202ENST00000415950 ARHGAP1Q07960 439 aa12.6□□□□□ -0.39
SCN1B-202ENST00000415950 TECRLQ5HYJ1 363 aa12.6□□□□□ -0.39
SCN1B-202ENST00000415950 TPRG1LQ5T0D9 272 aa12.6□□□□□ -0.39
SCN1B-202ENST00000415950 IDNKQ5T6J7 187 aa12.6□□□□□ -0.39
SCN1B-202ENST00000415950 CCSAPQ6IQ19 270 aaPredicted RBP12.6□□□□□ -0.39
SCN1B-202ENST00000415950 SYCE2Q6PIF2 218 aa12.6□□□□□ -0.39
SCN1B-202ENST00000415950 FRS2Q8WU20 508 aa12.6□□□□□ -0.39
SCN1B-202ENST00000415950 PPP1R16AQ96I34 528 aa12.6□□□□□ -0.39
SCN1B-202ENST00000415950 WRAP53Q9BUR4 548 aaKnown RBP12.6□□□□□ -0.39
SCN1B-202ENST00000415950 DSN1Q9H410 356 aa12.6□□□□□ -0.39
SCN1B-202ENST00000415950 NINQ8N4C6 2090 aa12.59□□□□□ -0.39
SCN1B-202ENST00000415950 CPNE3O75131 537 aaKnown RBP12.59□□□□□ -0.39
SCN1B-202ENST00000415950 KDM4BO94953 1096 aa12.59□□□□□ -0.39
SCN1B-202ENST00000415950 CCNB2O95067 398 aa12.59□□□□□ -0.39
SCN1B-202ENST00000415950 IFNGP01579 166 aa12.59□□□□□ -0.39
SCN1B-202ENST00000415950 ZNF24P17028 368 aa12.59□□□□□ -0.39
SCN1B-202ENST00000415950 VARSP26640 1264 aaKnown RBP12.59□□□□□ -0.39
SCN1B-202ENST00000415950 OPRL1P41146 370 aa12.59□□□□□ -0.39
SCN1B-202ENST00000415950 EEFSECP57772 596 aaKnown RBP12.59□□□□□ -0.39
SCN1B-202ENST00000415950 TARDBPQ13148 414 aaKnown RBP eCLIP12.59□□□□□ -0.39
SCN1B-202ENST00000415950 CLEC12AQ5QGZ9 265 aa12.59□□□□□ -0.39
SCN1B-202ENST00000415950 ALKBH2Q6NS38 261 aa12.59□□□□□ -0.39
SCN1B-202ENST00000415950 RGL4Q8IZJ4 473 aa12.59□□□□□ -0.39
SCN1B-202ENST00000415950 KRTCAP2Q8N6L1 136 aa12.59□□□□□ -0.39
SCN1B-202ENST00000415950 METTL25Q8N6Q8 603 aa12.59□□□□□ -0.39
SCN1B-202ENST00000415950 PJA1Q8NG27 643 aa12.59□□□□□ -0.39
SCN1B-202ENST00000415950 OR5K1Q8NHB7 308 aa12.59□□□□□ -0.39
SCN1B-202ENST00000415950 NKD1Q969G9 470 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms