RNA–Protein interactions for RNA: ENST00000415886.2

CTHRC1-202, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 2 BASIC

Gene CTHRC1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-202ENST00000415886 EDN3P14138 238 aa12.71□□□□□ -0.37
CTHRC1-202ENST00000415886 TCP1P17987 556 aaKnown RBP12.71□□□□□ -0.37
CTHRC1-202ENST00000415886 SHMT2P34897 504 aa12.71□□□□□ -0.37
CTHRC1-202ENST00000415886 GNG11P61952 73 aa12.71□□□□□ -0.37
CTHRC1-202ENST00000415886 AIMP2Q13155 320 aaKnown RBP12.71□□□□□ -0.37
CTHRC1-202ENST00000415886 THOC5Q13769 683 aaKnown RBP12.71□□□□□ -0.37
CTHRC1-202ENST00000415886 NKAIN1Q4KMZ8 207 aa12.71□□□□□ -0.37
CTHRC1-202ENST00000415886 ZNF658BQ4V348 819 aaPredicted RBP12.71□□□□□ -0.37
CTHRC1-202ENST00000415886 TTC27Q6P3X3 843 aa12.71□□□□□ -0.37
CTHRC1-202ENST00000415886 CES3Q6UWW8 571 aa12.71□□□□□ -0.37
CTHRC1-202ENST00000415886 NAPRTQ6XQN6 538 aa12.71□□□□□ -0.37
CTHRC1-202ENST00000415886 FJX1Q86VR8 437 aa12.71□□□□□ -0.37
CTHRC1-202ENST00000415886 LRRC6Q86X45 466 aa12.71□□□□□ -0.37
CTHRC1-202ENST00000415886 MPP5Q8N3R9 675 aa12.71□□□□□ -0.37
CTHRC1-202ENST00000415886 CFAP61Q8NHU2 1237 aa12.71□□□□□ -0.37
CTHRC1-202ENST00000415886 DNAJB14Q8TBM8 379 aa12.71□□□□□ -0.37
CTHRC1-202ENST00000415886 PROKR1Q8TCW9 393 aa12.71□□□□□ -0.37
CTHRC1-202ENST00000415886 COG1Q8WTW3 980 aa12.71□□□□□ -0.37
CTHRC1-202ENST00000415886 CNDP1Q96KN2 507 aa12.71□□□□□ -0.37
CTHRC1-202ENST00000415886 KIFC1Q9BW19 673 aa12.71□□□□□ -0.37
CTHRC1-202ENST00000415886 MRM3Q9HC36 420 aaKnown RBP12.71□□□□□ -0.37
CTHRC1-202ENST00000415886 XAB2Q9HCS7 855 aaKnown RBP12.71□□□□□ -0.37
CTHRC1-202ENST00000415886 SLC6A20Q9NP91 592 aa12.71□□□□□ -0.37
CTHRC1-202ENST00000415886 TREX1Q9NSU2 369 aa12.71□□□□□ -0.37
CTHRC1-202ENST00000415886 TXLNGQ9NUQ3 528 aa12.71□□□□□ -0.37
CTHRC1-202ENST00000415886 SYBUQ9NX95 663 aa12.71□□□□□ -0.37
CTHRC1-202ENST00000415886 GNPTGQ9UJJ9 305 aa12.71□□□□□ -0.37
CTHRC1-202ENST00000415886 FBXL4Q9UKA2 621 aa12.71□□□□□ -0.37
CTHRC1-202ENST00000415886 SNX12Q9UMY4 172 aa12.71□□□□□ -0.37
CTHRC1-202ENST00000415886 ICKQ9UPZ9 632 aa12.71□□□□□ -0.37
CTHRC1-202ENST00000415886 TCRBV7S3A2A0A539 114 aa12.7□□□□□ -0.38
CTHRC1-202ENST00000415886 SLC5A10A0PJK1 596 aa12.7□□□□□ -0.38
CTHRC1-202ENST00000415886 GOLGA8MH3BSY2 632 aa12.7□□□□□ -0.38
CTHRC1-202ENST00000415886 CES2O00748 559 aa12.7□□□□□ -0.38
CTHRC1-202ENST00000415886 KRT38O76015 456 aa12.7□□□□□ -0.38
CTHRC1-202ENST00000415886 CD63P08962 238 aa12.7□□□□□ -0.38
CTHRC1-202ENST00000415886 MLNP12872 115 aa12.7□□□□□ -0.38
CTHRC1-202ENST00000415886 UGT2B7P16662 529 aa12.7□□□□□ -0.38
CTHRC1-202ENST00000415886 CCR7P32248 378 aa12.7□□□□□ -0.38
CTHRC1-202ENST00000415886 TSFMP43897 325 aaKnown RBP12.7□□□□□ -0.38
CTHRC1-202ENST00000415886 FNTAP49354 379 aa12.7□□□□□ -0.38
CTHRC1-202ENST00000415886 EIF3BP55884 814 aaKnown RBP12.7□□□□□ -0.38
CTHRC1-202ENST00000415886 CDC16Q13042 620 aa12.7□□□□□ -0.38
CTHRC1-202ENST00000415886 ZNF169Q14929 603 aaPredicted RBP12.7□□□□□ -0.38
CTHRC1-202ENST00000415886 DNAJC21Q5F1R6 531 aaKnown RBP12.7□□□□□ -0.38
CTHRC1-202ENST00000415886 RNF187Q5TA31 235 aaPredicted RBP12.7□□□□□ -0.38
CTHRC1-202ENST00000415886 PRAMEF13Q5VWM6 474 aa12.7□□□□□ -0.38
CTHRC1-202ENST00000415886 ARMC3Q5W041 872 aa12.7□□□□□ -0.38
CTHRC1-202ENST00000415886 OTOAQ7RTW8 1153 aa12.7□□□□□ -0.38
CTHRC1-202ENST00000415886 KRT222Q8N1A0 295 aa12.7□□□□□ -0.38
CTHRC1-202ENST00000415886 OR5AR1Q8NGP9 310 aa12.7□□□□□ -0.38
CTHRC1-202ENST00000415886 FAR1Q8WVX9 515 aa12.7□□□□□ -0.38
CTHRC1-202ENST00000415886 MFSD3Q96ES6 412 aa12.7□□□□□ -0.38
CTHRC1-202ENST00000415886 FOPNLQ96NB1 174 aa12.7□□□□□ -0.38
CTHRC1-202ENST00000415886 TCF12Q99081 682 aa12.7□□□□□ -0.38
CTHRC1-202ENST00000415886 KCNF1Q9H3M0 494 aa12.7□□□□□ -0.38
CTHRC1-202ENST00000415886 SLC22A11Q9NSA0 550 aa12.7□□□□□ -0.38
CTHRC1-202ENST00000415886 IGSF5Q9NSI5 407 aa12.7□□□□□ -0.38
CTHRC1-202ENST00000415886 IRAK4Q9NWZ3 460 aa12.7□□□□□ -0.38
CTHRC1-202ENST00000415886 SLC39A10Q9ULF5 831 aa12.7□□□□□ -0.38
CTHRC1-202ENST00000415886 SOX13Q9UN79 622 aa12.7□□□□□ -0.38
CTHRC1-202ENST00000415886 MRFAP1Q9Y605 127 aa12.7□□□□□ -0.38
CTHRC1-202ENST00000415886 MAD1L1Q9Y6D9 718 aa12.7□□□□□ -0.38
CTHRC1-202ENST00000415886 LRBAP50851 2863 aa12.7□□□□□ -0.38
CTHRC1-202ENST00000415886 CTAGE9A4FU28 777 aa12.69□□□□□ -0.38
CTHRC1-202ENST00000415886 IQCF5A8MTL0 148 aa12.69□□□□□ -0.38
CTHRC1-202ENST00000415886 BHMG1C9JSJ3 638 aaPredicted RBP12.69□□□□□ -0.38
CTHRC1-202ENST00000415886 H3BMM5 538 aa12.69□□□□□ -0.38
CTHRC1-202ENST00000415886 STSP08842 583 aa12.69□□□□□ -0.38
CTHRC1-202ENST00000415886 CHRM3P20309 590 aa12.69□□□□□ -0.38
CTHRC1-202ENST00000415886 ACADLP28330 430 aa12.69□□□□□ -0.38
CTHRC1-202ENST00000415886 FMO4P31512 558 aa12.69□□□□□ -0.38
CTHRC1-202ENST00000415886 PAFAH1B1P43034 410 aa12.69□□□□□ -0.38
CTHRC1-202ENST00000415886 DHX34Q14147 1143 aaKnown RBP12.69□□□□□ -0.38
CTHRC1-202ENST00000415886 SEMA3AQ14563 771 aa12.69□□□□□ -0.38
CTHRC1-202ENST00000415886 KCNJ11Q14654 390 aa12.69□□□□□ -0.38
CTHRC1-202ENST00000415886 CYP1B1Q16678 543 aa12.69□□□□□ -0.38
CTHRC1-202ENST00000415886 KCTD19Q17RG1 926 aaPredicted RBP12.69□□□□□ -0.38
CTHRC1-202ENST00000415886 NEPROQ6NW34 567 aa12.69□□□□□ -0.38
CTHRC1-202ENST00000415886 IGFL2Q6UWQ7 119 aa12.69□□□□□ -0.38
CTHRC1-202ENST00000415886 UNC5AQ6ZN44 842 aa12.69□□□□□ -0.38
CTHRC1-202ENST00000415886 PCGF5Q86SE9 256 aa12.69□□□□□ -0.38
CTHRC1-202ENST00000415886 RAB42Q8N4Z0 105 aa12.69□□□□□ -0.38
CTHRC1-202ENST00000415886 MCUQ8NE86 351 aa12.69□□□□□ -0.38
CTHRC1-202ENST00000415886 OR5K2Q8NHB8 316 aa12.69□□□□□ -0.38
CTHRC1-202ENST00000415886 OR2A14Q96R47 310 aa12.69□□□□□ -0.38
CTHRC1-202ENST00000415886 SPHK1Q9NYA1 384 aa12.69□□□□□ -0.38
CTHRC1-202ENST00000415886 MARCH4Q9P2E8 410 aaPredicted RBP12.69□□□□□ -0.38
CTHRC1-202ENST00000415886 COPG2Q9UBF2 871 aa12.69□□□□□ -0.38
CTHRC1-202ENST00000415886 ASIC3Q9UHC3 531 aa12.69□□□□□ -0.38
CTHRC1-202ENST00000415886 VPS9D1Q9Y2B5 631 aa12.69□□□□□ -0.38
CTHRC1-202ENST00000415886 A0A0J9YY10 115 aa12.68□□□□□ -0.38
CTHRC1-202ENST00000415886 ISM1B1AKI9 464 aa12.68□□□□□ -0.38
CTHRC1-202ENST00000415886 GOLGA8KD6RF30 607 aa12.68□□□□□ -0.38
CTHRC1-202ENST00000415886 E5RI56 91 aa12.68□□□□□ -0.38
CTHRC1-202ENST00000415886 GOLGA8TH3BQL2 631 aa12.68□□□□□ -0.38
CTHRC1-202ENST00000415886 SOCS6O14544 535 aa12.68□□□□□ -0.38
CTHRC1-202ENST00000415886 ITGAXP20702 1163 aa12.68□□□□□ -0.38
CTHRC1-202ENST00000415886 MMP11P24347 488 aa12.68□□□□□ -0.38
CTHRC1-202ENST00000415886 MAGEA6P43360 314 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms