RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 CCDC166P0CW27 439 aa14.1□□□□□ -0.15
LIMS1-206ENST00000414829 MAGP20916 626 aa14.1□□□□□ -0.15
LIMS1-206ENST00000414829 IMPA1P29218 277 aa14.1□□□□□ -0.15
LIMS1-206ENST00000414829 ITGA1P56199 1179 aa14.1□□□□□ -0.15
LIMS1-206ENST00000414829 TBPL1P62380 186 aa14.1□□□□□ -0.15
LIMS1-206ENST00000414829 TAP2Q03519 686 aa14.1□□□□□ -0.15
LIMS1-206ENST00000414829 RELAQ04206 551 aa14.1□□□□□ -0.15
LIMS1-206ENST00000414829 TSTA3Q13630 321 aaPredicted RBP14.1□□□□□ -0.15
LIMS1-206ENST00000414829 ZNF460Q14592 562 aa14.1□□□□□ -0.15
LIMS1-206ENST00000414829 KCNAB1Q14722 419 aa14.1□□□□□ -0.15
LIMS1-206ENST00000414829 FAM83EQ2M2I3 478 aa14.1□□□□□ -0.15
LIMS1-206ENST00000414829 MROH9Q5TGP6 573 aa14.1□□□□□ -0.15
LIMS1-206ENST00000414829 PRAMEF13Q5VWM6 474 aa14.1□□□□□ -0.15
LIMS1-206ENST00000414829 WDR93Q6P2C0 686 aa14.1□□□□□ -0.15
LIMS1-206ENST00000414829 TRIM73Q86UV7 250 aa14.1□□□□□ -0.15
LIMS1-206ENST00000414829 TMEM126BQ8IUX1 230 aa14.1□□□□□ -0.15
LIMS1-206ENST00000414829 NLGN4XQ8N0W4 816 aa14.1□□□□□ -0.15
LIMS1-206ENST00000414829 NLGN4YQ8NFZ3 816 aaPredicted RBP14.1□□□□□ -0.15
LIMS1-206ENST00000414829 OR2A1Q8NGT9 310 aa14.1□□□□□ -0.15
LIMS1-206ENST00000414829 KIAA1143Q96AT1 154 aaPredicted RBP14.1□□□□□ -0.15
LIMS1-206ENST00000414829 TSNARE1Q96NA8 513 aa14.1□□□□□ -0.15
LIMS1-206ENST00000414829 MIPEPQ99797 713 aa14.1□□□□□ -0.15
LIMS1-206ENST00000414829 SLC7A5P2Q9GIP4 190 aa14.1□□□□□ -0.15
LIMS1-206ENST00000414829 CNOT10Q9H9A5 744 aaKnown RBP14.1□□□□□ -0.15
LIMS1-206ENST00000414829 NMRAL1Q9HBL8 299 aa14.1□□□□□ -0.15
LIMS1-206ENST00000414829 PLCL2Q9UPR0 1127 aa14.1□□□□□ -0.15
LIMS1-206ENST00000414829 ACOT9Q9Y305 439 aa14.1□□□□□ -0.15
LIMS1-206ENST00000414829 PCDHB3Q9Y5E6 796 aa14.1□□□□□ -0.15
LIMS1-206ENST00000414829 A0A1W2PPV9 198 aa14.09□□□□□ -0.15
LIMS1-206ENST00000414829 NPEPPSL1A6NEC2 478 aa14.09□□□□□ -0.15
LIMS1-206ENST00000414829 SYCE1LA8MT33 242 aa14.09□□□□□ -0.15
LIMS1-206ENST00000414829 TMEM150CB9EJG8 249 aa14.09□□□□□ -0.15
LIMS1-206ENST00000414829 E7EQ34 232 aa14.09□□□□□ -0.15
LIMS1-206ENST00000414829 PHGDHO43175 533 aaKnown RBP14.09□□□□□ -0.15
LIMS1-206ENST00000414829 TLX3O43711 291 aaPredicted RBP14.09□□□□□ -0.15
LIMS1-206ENST00000414829 PRICKLE3O43900 615 aaPredicted RBP14.09□□□□□ -0.15
LIMS1-206ENST00000414829 IPO13O94829 963 aaKnown RBP14.09□□□□□ -0.15
LIMS1-206ENST00000414829 WISP3O95389 354 aaPredicted RBP14.09□□□□□ -0.15
LIMS1-206ENST00000414829 LTA4HP09960 611 aaKnown RBP14.09□□□□□ -0.15
LIMS1-206ENST00000414829 PVRP15151 417 aa14.09□□□□□ -0.15
LIMS1-206ENST00000414829 EZRP15311 586 aaKnown RBP14.09□□□□□ -0.15
LIMS1-206ENST00000414829 TYK2P29597 1187 aa14.09□□□□□ -0.15
LIMS1-206ENST00000414829 PRDX1Q06830 199 aaKnown RBP14.09□□□□□ -0.15
LIMS1-206ENST00000414829 PHKG1Q16816 387 aa14.09□□□□□ -0.15
LIMS1-206ENST00000414829 PPP1R3AQ16821 1122 aa14.09□□□□□ -0.15
LIMS1-206ENST00000414829 TCTE1Q5JU00 501 aa14.09□□□□□ -0.15
LIMS1-206ENST00000414829 ICE2Q659A1 982 aa14.09□□□□□ -0.15
LIMS1-206ENST00000414829 TLDC1Q6P9B6 456 aa14.09□□□□□ -0.15
LIMS1-206ENST00000414829 EMBQ6PCB8 327 aa14.09□□□□□ -0.15
LIMS1-206ENST00000414829 FIGLAQ6QHK4 219 aa14.09□□□□□ -0.15
LIMS1-206ENST00000414829 AGTRAPQ6RW13 159 aa14.09□□□□□ -0.15
LIMS1-206ENST00000414829 SBSNQ6UWP8 590 aa14.09□□□□□ -0.15
LIMS1-206ENST00000414829 C2orf73Q8N5S3 287 aaPredicted RBP14.09□□□□□ -0.15
LIMS1-206ENST00000414829 TBC1D19Q8N5T2 526 aa14.09□□□□□ -0.15
LIMS1-206ENST00000414829 STAG3L4Q8TBR4 150 aa14.09□□□□□ -0.15
LIMS1-206ENST00000414829 ZNF501Q96CX3 271 aaPredicted RBP14.09□□□□□ -0.15
LIMS1-206ENST00000414829 MRRFQ96E11 262 aaKnown RBP14.09□□□□□ -0.15
LIMS1-206ENST00000414829 MED8Q96G25 268 aa14.09□□□□□ -0.15
LIMS1-206ENST00000414829 CABS1Q96KC9 395 aa14.09□□□□□ -0.15
LIMS1-206ENST00000414829 UBXN10Q96LJ8 280 aa14.09□□□□□ -0.15
LIMS1-206ENST00000414829 PPM1MQ96MI6 270 aa14.09□□□□□ -0.15
LIMS1-206ENST00000414829 DCBLD2Q96PD2 775 aa14.09□□□□□ -0.15
LIMS1-206ENST00000414829 CTRCQ99895 268 aa14.09□□□□□ -0.15
LIMS1-206ENST00000414829 EGFL8Q99944 293 aa14.09□□□□□ -0.15
LIMS1-206ENST00000414829 C17orf62Q9BQA9 187 aa14.09□□□□□ -0.15
LIMS1-206ENST00000414829 TXLNGYQ9BZA5 131 aa14.09□□□□□ -0.15
LIMS1-206ENST00000414829 ANKZF1Q9H8Y5 726 aa14.09□□□□□ -0.15
LIMS1-206ENST00000414829 CAB39LQ9H9S4 337 aa14.09□□□□□ -0.15
LIMS1-206ENST00000414829 SNX15Q9NRS6 342 aa14.09□□□□□ -0.15
LIMS1-206ENST00000414829 IRAK4Q9NWZ3 460 aa14.09□□□□□ -0.15
LIMS1-206ENST00000414829 TAC3Q9UHF0 121 aa14.09□□□□□ -0.15
LIMS1-206ENST00000414829 ADAMTS6Q9UKP5 1117 aa14.09□□□□□ -0.15
LIMS1-206ENST00000414829 SNX7Q9UNH6 387 aa14.09□□□□□ -0.15
LIMS1-206ENST00000414829 IQANK1A0A1B0GTG1 560 aa14.08□□□□□ -0.16
LIMS1-206ENST00000414829 POC1B-GALNT4F8VUJ3 575 aa14.08□□□□□ -0.16
LIMS1-206ENST00000414829 KLK10O43240 276 aa14.08□□□□□ -0.16
LIMS1-206ENST00000414829 RAD1O60671 282 aa14.08□□□□□ -0.16
LIMS1-206ENST00000414829 SRPX2O60687 465 aaPredicted RBP14.08□□□□□ -0.16
LIMS1-206ENST00000414829 SCRG1O75711 98 aa14.08□□□□□ -0.16
LIMS1-206ENST00000414829 FAM155BO75949 473 aa14.08□□□□□ -0.16
LIMS1-206ENST00000414829 DLGAP3O95886 979 aa14.08□□□□□ -0.16
LIMS1-206ENST00000414829 SNRPAP09012 282 aaKnown RBP14.08□□□□□ -0.16
LIMS1-206ENST00000414829 SLC35E2BP0CK96 405 aa14.08□□□□□ -0.16
LIMS1-206ENST00000414829 GRK3P35626 688 aa14.08□□□□□ -0.16
LIMS1-206ENST00000414829 GRIA3P42263 894 aa14.08□□□□□ -0.16
LIMS1-206ENST00000414829 FASTKQ14296 549 aaKnown RBP14.08□□□□□ -0.16
LIMS1-206ENST00000414829 CSHL1Q14406 222 aa14.08□□□□□ -0.16
LIMS1-206ENST00000414829 TSNQ15631 228 aaKnown RBP14.08□□□□□ -0.16
LIMS1-206ENST00000414829 YOD1Q5VVQ6 348 aaPredicted RBP14.08□□□□□ -0.16
LIMS1-206ENST00000414829 TMEM207Q6UWW9 146 aa14.08□□□□□ -0.16
LIMS1-206ENST00000414829 C6orf15Q6UXA7 325 aaPredicted RBP14.08□□□□□ -0.16
LIMS1-206ENST00000414829 CDHR3Q6ZTQ4 885 aa14.08□□□□□ -0.16
LIMS1-206ENST00000414829 LCA5Q86VQ0 697 aa14.08□□□□□ -0.16
LIMS1-206ENST00000414829 C17orf64Q86WR6 236 aa14.08□□□□□ -0.16
LIMS1-206ENST00000414829 DTX1Q86Y01 620 aa14.08□□□□□ -0.16
LIMS1-206ENST00000414829 GPSM1Q86YR5 675 aa14.08□□□□□ -0.16
LIMS1-206ENST00000414829 CACNA2D3Q8IZS8 1091 aa14.08□□□□□ -0.16
LIMS1-206ENST00000414829 IL22RA1Q8N6P7 574 aa14.08□□□□□ -0.16
LIMS1-206ENST00000414829 DLG3Q92796 817 aa14.08□□□□□ -0.16
LIMS1-206ENST00000414829 ISL2Q96A47 359 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms