RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 MMGT1Q8N4V1 131 aa6.15□□□□□ -1.42
USP54-202ENST00000413442 TTC29Q8NA56 475 aaPredicted RBP6.15□□□□□ -1.42
USP54-202ENST00000413442 GALNT6Q8NCL4 622 aa6.15□□□□□ -1.42
USP54-202ENST00000413442 OR2L3Q8NG85 312 aa6.15□□□□□ -1.42
USP54-202ENST00000413442 CFAP61Q8NHU2 1237 aa6.15□□□□□ -1.42
USP54-202ENST00000413442 KIF18AQ8NI77 898 aa6.15□□□□□ -1.42
USP54-202ENST00000413442 STARD8Q92502 1023 aa6.15□□□□□ -1.42
USP54-202ENST00000413442 PTERQ96BW5 349 aa6.15□□□□□ -1.42
USP54-202ENST00000413442 FER1L6-AS2Q96M78 137 aa6.15□□□□□ -1.42
USP54-202ENST00000413442 KRT12Q99456 494 aa6.15□□□□□ -1.42
USP54-202ENST00000413442 SARGQ9BW04 601 aa6.15□□□□□ -1.42
USP54-202ENST00000413442 PITHD1Q9GZP4 211 aaPredicted RBP6.15□□□□□ -1.42
USP54-202ENST00000413442 SLC25A18Q9H1K4 315 aa6.15□□□□□ -1.42
USP54-202ENST00000413442 PPANQ9NQ55 473 aaKnown RBP6.15□□□□□ -1.42
USP54-202ENST00000413442 IARS2Q9NSE4 1012 aaKnown RBP6.15□□□□□ -1.42
USP54-202ENST00000413442 TXLNGQ9NUQ3 528 aa6.15□□□□□ -1.42
USP54-202ENST00000413442 C5AR2Q9P296 337 aa6.15□□□□□ -1.42
USP54-202ENST00000413442 GPN3Q9UHW5 284 aaPredicted RBP6.15□□□□□ -1.42
USP54-202ENST00000413442 FREM2Q5SZK8 3169 aa6.15□□□□□ -1.43
USP54-202ENST00000413442 FAM208BQ5VWN6 2430 aa6.14□□□□□ -1.43
USP54-202ENST00000413442 OR2A25A4D2G3 310 aa6.14□□□□□ -1.43
USP54-202ENST00000413442 SYNDIG1LA6NDD5 238 aa6.14□□□□□ -1.43
USP54-202ENST00000413442 GOLGA8KD6RF30 607 aa6.14□□□□□ -1.43
USP54-202ENST00000413442 E7ENX8 843 aa6.14□□□□□ -1.43
USP54-202ENST00000413442 H3BMH7 237 aa6.14□□□□□ -1.43
USP54-202ENST00000413442 GOLGA8TH3BQL2 631 aa6.14□□□□□ -1.43
USP54-202ENST00000413442 DSCR3O14972 297 aa6.14□□□□□ -1.43
USP54-202ENST00000413442 ZSCAN9O15535 394 aaPredicted RBP6.14□□□□□ -1.43
USP54-202ENST00000413442 ZNF749O43361 778 aa6.14□□□□□ -1.43
USP54-202ENST00000413442 KATNA1O75449 491 aa6.14□□□□□ -1.43
USP54-202ENST00000413442 IPO13O94829 963 aaKnown RBP6.14□□□□□ -1.43
USP54-202ENST00000413442 NTRK1P04629 796 aa6.14□□□□□ -1.43
USP54-202ENST00000413442 ERVK-10P10266 1014 aa6.14□□□□□ -1.43
USP54-202ENST00000413442 ITGB6P18564 788 aa6.14□□□□□ -1.43
USP54-202ENST00000413442 CXCR2P25025 360 aa6.14□□□□□ -1.43
USP54-202ENST00000413442 PHBP35232 272 aa6.14□□□□□ -1.43
USP54-202ENST00000413442 SPRP35270 261 aaPredicted RBP6.14□□□□□ -1.43
USP54-202ENST00000413442 RPL21P46778 160 aaKnown RBP6.14□□□□□ -1.43
USP54-202ENST00000413442 ATP6V0D1P61421 351 aa6.14□□□□□ -1.43
USP54-202ENST00000413442 TAP2Q03519 686 aa6.14□□□□□ -1.43
USP54-202ENST00000413442 GPR19Q15760 415 aa6.14□□□□□ -1.43
USP54-202ENST00000413442 NDUFA9Q16795 377 aa6.14□□□□□ -1.43
USP54-202ENST00000413442 LINC00303Q3SY05 128 aa6.14□□□□□ -1.43
USP54-202ENST00000413442 ACSBG2Q5FVE4 666 aa6.14□□□□□ -1.43
USP54-202ENST00000413442 KIAA1614Q5VZ46 1190 aa6.14□□□□□ -1.43
USP54-202ENST00000413442 CAPN13Q6MZZ7 669 aaPredicted RBP6.14□□□□□ -1.43
USP54-202ENST00000413442 TCTN3Q6NUS6 607 aa6.14□□□□□ -1.43
USP54-202ENST00000413442 FBXO38Q6PIJ6 1188 aa6.14□□□□□ -1.43
USP54-202ENST00000413442 CNSTQ6PJW8 725 aa6.14□□□□□ -1.43
USP54-202ENST00000413442 LCTLQ6UWM7 567 aa6.14□□□□□ -1.43
USP54-202ENST00000413442 C3orf62Q6ZUJ4 267 aa6.14□□□□□ -1.43
USP54-202ENST00000413442 UBE2R2Q712K3 238 aaPredicted RBP6.14□□□□□ -1.43
USP54-202ENST00000413442 OVCH1Q7RTY7 1134 aa6.14□□□□□ -1.43
USP54-202ENST00000413442 STRA8Q7Z7C7 330 aa6.14□□□□□ -1.43
USP54-202ENST00000413442 SYTL1Q8IYJ3 562 aa6.14□□□□□ -1.43
USP54-202ENST00000413442 ZBED8Q8IZ13 594 aa6.14□□□□□ -1.43
USP54-202ENST00000413442 TCAIMQ8N3R3 496 aa6.14□□□□□ -1.43
USP54-202ENST00000413442 CEP112Q8N8E3 955 aa6.14□□□□□ -1.43
USP54-202ENST00000413442 EIF1ADQ8N9N8 165 aaKnown RBP6.14□□□□□ -1.43
USP54-202ENST00000413442 LINC01555Q8NAE3 123 aa6.14□□□□□ -1.43
USP54-202ENST00000413442 FBXO36Q8NEA4 188 aa6.14□□□□□ -1.43
USP54-202ENST00000413442 OR1L3Q8NH93 324 aa6.14□□□□□ -1.43
USP54-202ENST00000413442 CD200R1Q8TD46 325 aa6.14□□□□□ -1.43
USP54-202ENST00000413442 ZNF480Q8WV37 535 aa6.14□□□□□ -1.43
USP54-202ENST00000413442 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.14□□□□□ -1.43
USP54-202ENST00000413442 MR1Q95460 341 aa6.14□□□□□ -1.43
USP54-202ENST00000413442 GPR21Q99679 349 aa6.14□□□□□ -1.43
USP54-202ENST00000413442 CPNE1Q99829 537 aa6.14□□□□□ -1.43
USP54-202ENST00000413442 ZFYVE21Q9BQ24 234 aa6.14□□□□□ -1.43
USP54-202ENST00000413442 PLCD4Q9BRC7 762 aa6.14□□□□□ -1.43
USP54-202ENST00000413442 RHOJQ9H4E5 214 aa6.14□□□□□ -1.43
USP54-202ENST00000413442 XKR8Q9H6D3 395 aa6.14□□□□□ -1.43
USP54-202ENST00000413442 MRPS30Q9NP92 439 aaKnown RBP6.14□□□□□ -1.43
USP54-202ENST00000413442 FBXO6Q9NRD1 293 aaPredicted RBP6.14□□□□□ -1.43
USP54-202ENST00000413442 RYDENQ9NUL5 291 aaKnown RBP6.14□□□□□ -1.43
USP54-202ENST00000413442 PCMTD2Q9NV79 361 aa6.14□□□□□ -1.43
USP54-202ENST00000413442 SPHK1Q9NYA1 384 aa6.14□□□□□ -1.43
USP54-202ENST00000413442 MTRF1LQ9UGC7 380 aaKnown RBP6.14□□□□□ -1.43
USP54-202ENST00000413442 NDOR1Q9UHB4 597 aa6.14□□□□□ -1.43
USP54-202ENST00000413442 ANAPC2Q9UJX6 822 aa6.14□□□□□ -1.43
USP54-202ENST00000413442 CROTQ9UKG9 612 aa6.14□□□□□ -1.43
USP54-202ENST00000413442 TCFL5Q9UL49 500 aa6.14□□□□□ -1.43
USP54-202ENST00000413442 MED16Q9Y2X0 877 aa6.14□□□□□ -1.43
USP54-202ENST00000413442 SNX24Q9Y343 169 aa6.14□□□□□ -1.43
USP54-202ENST00000413442 PCDHGA9Q9Y5G4 932 aaKnown RBP6.14□□□□□ -1.43
USP54-202ENST00000413442 KCNMB2Q9Y691 235 aa6.14□□□□□ -1.43
USP54-202ENST00000413442 ANKRD12Q6UB98 2062 aa6.14□□□□□ -1.43
USP54-202ENST00000413442 DSPP15924 2871 aaKnown RBP6.14□□□□□ -1.43
USP54-202ENST00000413442 PTPRQQ9UMZ3 2332 aa6.14□□□□□ -1.43
USP54-202ENST00000413442 IGF2RP11717 2491 aa6.14□□□□□ -1.43
USP54-202ENST00000413442 ZZEF1O43149 2961 aa6.13□□□□□ -1.43
USP54-202ENST00000413442 HEATR5BQ9P2D3 2071 aa6.13□□□□□ -1.43
USP54-202ENST00000413442 SEC16AO15027 2179 aa6.13□□□□□ -1.43
USP54-202ENST00000413442 PKD1L2Q7Z442 2459 aa6.13□□□□□ -1.43
USP54-202ENST00000413442 A0A1B0GX78 115 aa6.13□□□□□ -1.43
USP54-202ENST00000413442 A0A1W2PPV9 198 aa6.13□□□□□ -1.43
USP54-202ENST00000413442 HYKKA2RU49 373 aa6.13□□□□□ -1.43
USP54-202ENST00000413442 CTAGE15A4D2H0 777 aa6.13□□□□□ -1.43
USP54-202ENST00000413442 URADA6NGE7 173 aa6.13□□□□□ -1.43
USP54-202ENST00000413442 ARHGEF33A8MVX0 844 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms