RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 HS3ST3B1Q9Y662 390 aa18.4■□□□□ 0.54
CPSF7-204ENST00000413232 CRYBG3Q68DQ2 2970 aa18.4■□□□□ 0.54
CPSF7-204ENST00000413232 LOC105369274A0A096LPK9 316 aa18.39■□□□□ 0.53
CPSF7-204ENST00000413232 LOC102723532A0A0G2JNH3 316 aa18.39■□□□□ 0.53
CPSF7-204ENST00000413232 NIPSNAP2O75323 286 aa18.39■□□□□ 0.53
CPSF7-204ENST00000413232 NDUFS3O75489 264 aa18.39■□□□□ 0.53
CPSF7-204ENST00000413232 VAPBO95292 243 aa18.39■□□□□ 0.53
CPSF7-204ENST00000413232 NPY2RP49146 381 aa18.39■□□□□ 0.53
CPSF7-204ENST00000413232 VSX2P58304 361 aaPredicted RBP18.39■□□□□ 0.53
CPSF7-204ENST00000413232 TMED2Q15363 201 aa18.39■□□□□ 0.53
CPSF7-204ENST00000413232 CNSTQ6PJW8 725 aa18.39■□□□□ 0.53
CPSF7-204ENST00000413232 KIRREL2Q6UWL6 708 aa18.39■□□□□ 0.53
CPSF7-204ENST00000413232 Q6ZS92 163 aa18.39■□□□□ 0.53
CPSF7-204ENST00000413232 OTOAQ7RTW8 1153 aa18.39■□□□□ 0.53
CPSF7-204ENST00000413232 IQCKQ8N0W5 287 aa18.39■□□□□ 0.53
CPSF7-204ENST00000413232 OR4N4Q8N0Y3 316 aa18.39■□□□□ 0.53
CPSF7-204ENST00000413232 OR2A1Q8NGT9 310 aa18.39■□□□□ 0.53
CPSF7-204ENST00000413232 FKBP10Q96AY3 582 aa18.39■□□□□ 0.53
CPSF7-204ENST00000413232 RAD51AP1Q96B01 352 aa18.39■□□□□ 0.53
CPSF7-204ENST00000413232 PANX3Q96QZ0 392 aa18.39■□□□□ 0.53
CPSF7-204ENST00000413232 SELENOSQ9BQE4 189 aa18.39■□□□□ 0.53
CPSF7-204ENST00000413232 TRIM56Q9BRZ2 755 aaKnown RBP18.39■□□□□ 0.53
CPSF7-204ENST00000413232 KIFC1Q9BW19 673 aa18.39■□□□□ 0.53
CPSF7-204ENST00000413232 TSGA10Q9BZW7 698 aa18.39■□□□□ 0.53
CPSF7-204ENST00000413232 IL22Q9GZX6 179 aa18.39■□□□□ 0.53
CPSF7-204ENST00000413232 SLC26A1Q9H2B4 701 aa18.39■□□□□ 0.53
CPSF7-204ENST00000413232 SOX17Q9H6I2 414 aaPredicted RBP18.39■□□□□ 0.53
CPSF7-204ENST00000413232 SYNPO2LQ9H987 977 aa18.39■□□□□ 0.53
CPSF7-204ENST00000413232 INTS7Q9NVH2 962 aaKnown RBP18.39■□□□□ 0.53
CPSF7-204ENST00000413232 MAU2Q9Y6X3 613 aa18.39■□□□□ 0.53
CPSF7-204ENST00000413232 CENPEQ02224 2701 aa18.39■□□□□ 0.53
CPSF7-204ENST00000413232 ITPR2Q14571 2701 aa18.39■□□□□ 0.53
CPSF7-204ENST00000413232 A1L4Q6 167 aa18.38■□□□□ 0.53
CPSF7-204ENST00000413232 FITM1A5D6W6 292 aa18.38■□□□□ 0.53
CPSF7-204ENST00000413232 ALBP02768 609 aa18.38■□□□□ 0.53
CPSF7-204ENST00000413232 F7P08709 466 aaPredicted RBP18.38■□□□□ 0.53
CPSF7-204ENST00000413232 FMO4P31512 558 aa18.38■□□□□ 0.53
CPSF7-204ENST00000413232 AIMP2Q13155 320 aaKnown RBP18.38■□□□□ 0.53
CPSF7-204ENST00000413232 GBX1Q14549 363 aa18.38■□□□□ 0.53
CPSF7-204ENST00000413232 GRM7Q14831 915 aa18.38■□□□□ 0.53
CPSF7-204ENST00000413232 HIF1AQ16665 826 aa18.38■□□□□ 0.53
CPSF7-204ENST00000413232 ZC3H12BQ5HYM0 836 aaKnown RBP18.38■□□□□ 0.53
CPSF7-204ENST00000413232 WASHC2DQ5SRD0 308 aa18.38■□□□□ 0.53
CPSF7-204ENST00000413232 OR2L3Q8NG85 312 aa18.38■□□□□ 0.53
CPSF7-204ENST00000413232 HMGCLL1Q8TB92 370 aa18.38■□□□□ 0.53
CPSF7-204ENST00000413232 SKA2Q8WVK7 121 aaPredicted RBP18.38■□□□□ 0.53
CPSF7-204ENST00000413232 LPGAT1Q92604 370 aa18.38■□□□□ 0.53
CPSF7-204ENST00000413232 ZUFSPQ96AP4 578 aa18.38■□□□□ 0.53
CPSF7-204ENST00000413232 WDR54Q9H977 334 aa18.38■□□□□ 0.53
CPSF7-204ENST00000413232 BFARQ9NZS9 450 aa18.38■□□□□ 0.53
CPSF7-204ENST00000413232 ERRFI1Q9UJM3 462 aaPredicted RBP18.38■□□□□ 0.53
CPSF7-204ENST00000413232 CDC23Q9UJX2 597 aa18.38■□□□□ 0.53
CPSF7-204ENST00000413232 KLK4Q9Y5K2 254 aa18.38■□□□□ 0.53
CPSF7-204ENST00000413232 A0A0J9YVX5 310 aa18.37■□□□□ 0.53
CPSF7-204ENST00000413232 VSTM2BA6NLU5 285 aa18.37■□□□□ 0.53
CPSF7-204ENST00000413232 TARM1B6A8C7 271 aa18.37■□□□□ 0.53
CPSF7-204ENST00000413232 AVILO75366 819 aa18.37■□□□□ 0.53
CPSF7-204ENST00000413232 MATN4O95460 622 aa18.37■□□□□ 0.53
CPSF7-204ENST00000413232 IGHEP01854 428 aa18.37■□□□□ 0.53
CPSF7-204ENST00000413232 FGGP02679 453 aa18.37■□□□□ 0.53
CPSF7-204ENST00000413232 ALPPP05187 535 aa18.37■□□□□ 0.53
CPSF7-204ENST00000413232 ITGA3P26006 1051 aa18.37■□□□□ 0.53
CPSF7-204ENST00000413232 TERF1P54274 439 aa18.37■□□□□ 0.53
CPSF7-204ENST00000413232 Q0VFX4 171 aa18.37■□□□□ 0.53
CPSF7-204ENST00000413232 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.37■□□□□ 0.53
CPSF7-204ENST00000413232 TCTE1Q5JU00 501 aa18.37■□□□□ 0.53
CPSF7-204ENST00000413232 PRAMEF13Q5VWM6 474 aa18.37■□□□□ 0.53
CPSF7-204ENST00000413232 FBXO42Q6P3S6 717 aa18.37■□□□□ 0.53
CPSF7-204ENST00000413232 LRRC6Q86X45 466 aa18.37■□□□□ 0.53
CPSF7-204ENST00000413232 MPP5Q8N3R9 675 aa18.37■□□□□ 0.53
CPSF7-204ENST00000413232 BARD1Q99728 777 aaKnown RBP18.37■□□□□ 0.53
CPSF7-204ENST00000413232 RAB11FIP5Q9BXF6 653 aa18.37■□□□□ 0.53
CPSF7-204ENST00000413232 CUEDC1Q9NWM3 386 aaPredicted RBP18.37■□□□□ 0.53
CPSF7-204ENST00000413232 IL1RAPL1Q9NZN1 696 aa18.37■□□□□ 0.53
CPSF7-204ENST00000413232 CRYL1Q9Y2S2 319 aa18.37■□□□□ 0.53
CPSF7-204ENST00000413232 PCDHGA10Q9Y5H3 936 aa18.37■□□□□ 0.53
CPSF7-204ENST00000413232 HYKKA2RU49 373 aa18.36■□□□□ 0.53
CPSF7-204ENST00000413232 CXCR5P32302 372 aa18.36■□□□□ 0.53
CPSF7-204ENST00000413232 TRIP13Q15645 432 aaPredicted RBP18.36■□□□□ 0.53
CPSF7-204ENST00000413232 TYSND1Q2T9J0 566 aa18.36■□□□□ 0.53
CPSF7-204ENST00000413232 ACSBG2Q5FVE4 666 aa18.36■□□□□ 0.53
CPSF7-204ENST00000413232 YOD1Q5VVQ6 348 aaPredicted RBP18.36■□□□□ 0.53
CPSF7-204ENST00000413232 LRRC8BQ6P9F7 803 aa18.36■□□□□ 0.53
CPSF7-204ENST00000413232 TTC23LQ6PF05 361 aa18.36■□□□□ 0.53
CPSF7-204ENST00000413232 PARP9Q8IXQ6 854 aa18.36■□□□□ 0.53
CPSF7-204ENST00000413232 ZADH2Q8N4Q0 377 aa18.36■□□□□ 0.53
CPSF7-204ENST00000413232 OTUD6BQ8N6M0 293 aa18.36■□□□□ 0.53
CPSF7-204ENST00000413232 GSDMBQ8TAX9 411 aa18.36■□□□□ 0.53
CPSF7-204ENST00000413232 UBE2Q2Q8WVN8 375 aa18.36■□□□□ 0.53
CPSF7-204ENST00000413232 NACC2Q96BF6 587 aa18.36■□□□□ 0.53
CPSF7-204ENST00000413232 ACAT2Q9BWD1 397 aa18.36■□□□□ 0.53
CPSF7-204ENST00000413232 SLC29A3Q9BZD2 475 aa18.36■□□□□ 0.53
CPSF7-204ENST00000413232 ILKAPQ9H0C8 392 aaPredicted RBP18.36■□□□□ 0.53
CPSF7-204ENST00000413232 MRM3Q9HC36 420 aaKnown RBP18.36■□□□□ 0.53
CPSF7-204ENST00000413232 CELSR2Q9HCU4 2923 aa18.36■□□□□ 0.53
CPSF7-204ENST00000413232 LZTFL1Q9NQ48 299 aa18.36■□□□□ 0.53
CPSF7-204ENST00000413232 SCN3AQ9NY46 2000 aa18.36■□□□□ 0.53
CPSF7-204ENST00000413232 ZC3H7BQ9UGR2 993 aaKnown RBP18.36■□□□□ 0.53
CPSF7-204ENST00000413232 SOX13Q9UN79 622 aa18.36■□□□□ 0.53
CPSF7-204ENST00000413232 WIPF3A6NGB9 483 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms