RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 RFPL1O75677 317 aa8.31□□□□□ -1.08
SYNE1-211ENST00000413186 EPN2O95208 641 aa8.31□□□□□ -1.08
SYNE1-211ENST00000413186 EGFP01133 1207 aa8.31□□□□□ -1.08
SYNE1-211ENST00000413186 PPIBP23284 216 aaKnown RBP8.31□□□□□ -1.08
SYNE1-211ENST00000413186 P2RY2P41231 377 aa8.31□□□□□ -1.08
SYNE1-211ENST00000413186 PREPP48147 710 aa8.31□□□□□ -1.08
SYNE1-211ENST00000413186 ATP12AP54707 1039 aa8.31□□□□□ -1.08
SYNE1-211ENST00000413186 DCDC1P59894 354 aa8.31□□□□□ -1.08
SYNE1-211ENST00000413186 CBLBQ13191 982 aa8.31□□□□□ -1.08
SYNE1-211ENST00000413186 HTR4Q13639 388 aa8.31□□□□□ -1.08
SYNE1-211ENST00000413186 ACSBG2Q5FVE4 666 aa8.31□□□□□ -1.08
SYNE1-211ENST00000413186 NAPRTQ6XQN6 538 aa8.31□□□□□ -1.08
SYNE1-211ENST00000413186 NEK10Q6ZWH5 1172 aa8.31□□□□□ -1.08
SYNE1-211ENST00000413186 BNIPLQ7Z465 357 aa8.31□□□□□ -1.08
SYNE1-211ENST00000413186 FGD2Q7Z6J4 655 aa8.31□□□□□ -1.08
SYNE1-211ENST00000413186 FITM2Q8N6M3 262 aa8.31□□□□□ -1.08
SYNE1-211ENST00000413186 OLIG1Q8TAK6 271 aa8.31□□□□□ -1.08
SYNE1-211ENST00000413186 ARRDC3Q96B67 414 aa8.31□□□□□ -1.08
SYNE1-211ENST00000413186 DNAAF2Q9NVR5 837 aaKnown RBP8.31□□□□□ -1.08
SYNE1-211ENST00000413186 ZNF358Q9NW07 568 aa8.31□□□□□ -1.08
SYNE1-211ENST00000413186 INTS6Q9UL03 887 aaKnown RBP8.31□□□□□ -1.08
SYNE1-211ENST00000413186 ABCG2Q9UNQ0 655 aa8.31□□□□□ -1.08
SYNE1-211ENST00000413186 CORO2BQ9UQ03 480 aa8.31□□□□□ -1.08
SYNE1-211ENST00000413186 RUVBL1Q9Y265 456 aaKnown RBP8.31□□□□□ -1.08
SYNE1-211ENST00000413186 ATP6AP2A0A1C7CYW4 349 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 TOR1BO14657 336 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 DLX3O60479 287 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 ATP6AP2O75787 350 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 DNAJB13P59910 316 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 TRIM25Q14258 630 aaKnown RBP8.3□□□□□ -1.08
SYNE1-211ENST00000413186 TMEM52BQ4KMG9 183 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 PRRT3Q5FWE3 981 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 DHFR2Q86XF0 187 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 CCDC103Q8IW40 242 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 LMLNQ96KR4 655 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 NCDNQ9UBB6 729 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 INVSQ9Y283 1065 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 SNX8Q9Y5X2 465 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 WASF2Q9Y6W5 498 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 KCNH1O95259 989 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 HPGDP15428 266 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 CREB1P16220 341 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 MMP12P39900 470 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 BUD31P41223 144 aaPredicted RBP8.3□□□□□ -1.08
SYNE1-211ENST00000413186 KCNJ2P63252 427 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 BNIP2Q12982 314 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 CCNYL2Q5T2Q4 361 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 KIAA0895LQ68EN5 471 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 PNCKQ6P2M8 343 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 TMEM184AQ6ZMB5 413 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 ZNF621Q6ZSS3 439 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 STK32CQ86UX6 486 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 SAMD14Q8IZD0 417 aaPredicted RBP8.3□□□□□ -1.08
SYNE1-211ENST00000413186 S100PBPQ96BU1 408 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 APOLD1Q96LR9 279 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 ZNF184Q99676 751 aaPredicted RBP8.3□□□□□ -1.08
SYNE1-211ENST00000413186 KLHL28Q9NXS3 571 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 PCDH10Q9P2E7 1040 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 KLHL3Q9UH77 587 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 PCDHGA2Q9Y5H1 932 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 ZNF780BQ9Y6R6 833 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 IMPDH2P12268 514 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 FASP25445 335 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 DEFA1P59665 94 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 DEFA3P59666 94 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 CDKL4Q5MAI5 379 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 LYSMD4Q5XG99 296 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 MSANTD1Q6ZTZ1 278 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 CNTN4Q8IWV2 1026 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 CENPLQ8N0S6 344 aaPredicted RBP8.3□□□□□ -1.08
SYNE1-211ENST00000413186 B4GALNT2Q8NHY0 566 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 PPCDCQ96CD2 204 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 C12orf65Q9H3J6 166 aaKnown RBP8.3□□□□□ -1.08
SYNE1-211ENST00000413186 TIMMDC1Q9NPL8 285 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 SIRPGQ9P1W8 387 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 CLEC4EQ9ULY5 219 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 PRKAB1Q9Y478 270 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 TIMM22Q9Y584 194 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 FADS3Q9Y5Q0 445 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 SDK1Q7Z5N4 2213 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 DIDO1Q9BTC0 2240 aaKnown RBP8.3□□□□□ -1.08
SYNE1-211ENST00000413186 CPED1A4D0V7 1026 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 MROH6A6NGR9 719 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 FOXO6A8MYZ6 492 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 PRRT4C9JH25 899 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 TRIM38O00635 465 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 GSC2O15499 205 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 OR10H2O60403 315 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 SLC22A3O75751 556 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 ALDOAP04075 364 aaKnown RBP8.3□□□□□ -1.08
SYNE1-211ENST00000413186 CR2P20023 1033 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 ALDH4A1P30038 563 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 CYP4F2P78329 520 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 ZNHIT3Q15649 155 aaPredicted RBP8.3□□□□□ -1.08
SYNE1-211ENST00000413186 PTCHD3Q3KNS1 767 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 TMEM150AQ86TG1 271 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 THOC6Q86W42 341 aaKnown RBP8.3□□□□□ -1.08
SYNE1-211ENST00000413186 FAM217AQ8IXS0 508 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 CLEC4FQ8N1N0 589 aa8.3□□□□□ -1.08
SYNE1-211ENST00000413186 CAMKK1Q8N5S9 505 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms