RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 NSMCE2Q96MF7 247 aa23.81■■□□□ 1.4
VRK2-202ENST00000412104 ZNF583Q96ND8 569 aa23.81■■□□□ 1.4
VRK2-202ENST00000412104 LMAN2LQ9H0V9 348 aa23.81■■□□□ 1.4
VRK2-202ENST00000412104 PRSS16Q9NQE7 514 aa23.81■■□□□ 1.4
VRK2-202ENST00000412104 THAP10Q9P2Z0 257 aaPredicted RBP23.81■■□□□ 1.4
VRK2-202ENST00000412104 ATXN10Q9UBB4 475 aa23.81■■□□□ 1.4
VRK2-202ENST00000412104 HCN2Q9UL51 889 aa23.81■■□□□ 1.4
VRK2-202ENST00000412104 PCDHGB4Q9UN71 923 aa23.81■■□□□ 1.4
VRK2-202ENST00000412104 PCDHGB5Q9Y5G0 923 aa23.81■■□□□ 1.4
VRK2-202ENST00000412104 SOCS2O14508 198 aa23.8■■□□□ 1.4
VRK2-202ENST00000412104 C1orf105O95561 183 aa23.8■■□□□ 1.4
VRK2-202ENST00000412104 EPHX1P07099 455 aa23.8■■□□□ 1.4
VRK2-202ENST00000412104 FCGR1AP12314 374 aa23.8■■□□□ 1.4
VRK2-202ENST00000412104 P2RY2P41231 377 aa23.8■■□□□ 1.4
VRK2-202ENST00000412104 FCHO2Q0JRZ9 810 aa23.8■■□□□ 1.4
VRK2-202ENST00000412104 GTF2H3Q13889 308 aa23.8■■□□□ 1.4
VRK2-202ENST00000412104 RNF220Q5VTB9 566 aa23.8■■□□□ 1.4
VRK2-202ENST00000412104 GRHL2Q6ISB3 625 aa23.8■■□□□ 1.4
VRK2-202ENST00000412104 PPP4R4Q6NUP7 873 aa23.8■■□□□ 1.4
VRK2-202ENST00000412104 XKR5Q6UX68 686 aa23.8■■□□□ 1.4
VRK2-202ENST00000412104 EPHX4Q8IUS5 362 aa23.8■■□□□ 1.4
VRK2-202ENST00000412104 CXorf40AQ8TE69 158 aa23.8■■□□□ 1.4
VRK2-202ENST00000412104 IKZF5Q9H5V7 419 aa23.8■■□□□ 1.4
VRK2-202ENST00000412104 TRIM39Q9HCM9 518 aa23.8■■□□□ 1.4
VRK2-202ENST00000412104 PPT2Q9UMR5 302 aa23.8■■□□□ 1.4
VRK2-202ENST00000412104 GGT1P19440 569 aa23.8■■□□□ 1.4
VRK2-202ENST00000412104 S100A3P33764 101 aa23.8■■□□□ 1.4
VRK2-202ENST00000412104 GTDC1Q4AE62 458 aa23.8■■□□□ 1.4
VRK2-202ENST00000412104 NOXRED1Q6NXP6 359 aa23.8■■□□□ 1.4
VRK2-202ENST00000412104 FBXO15Q8NCQ5 510 aaPredicted RBP23.8■■□□□ 1.4
VRK2-202ENST00000412104 TESCQ96BS2 214 aa23.8■■□□□ 1.4
VRK2-202ENST00000412104 CENPNQ96H22 339 aaPredicted RBP23.8■■□□□ 1.4
VRK2-202ENST00000412104 FCRL1Q96LA6 429 aa23.8■■□□□ 1.4
VRK2-202ENST00000412104 CCDC115Q96NT0 180 aa23.8■■□□□ 1.4
VRK2-202ENST00000412104 THUMPD3Q9BV44 507 aaKnown RBP23.8■■□□□ 1.4
VRK2-202ENST00000412104 OSBPL11Q9BXB4 747 aa23.8■■□□□ 1.4
VRK2-202ENST00000412104 HDAC8Q9BY41 377 aa23.8■■□□□ 1.4
VRK2-202ENST00000412104 CDH7Q9ULB5 785 aa23.8■■□□□ 1.4
VRK2-202ENST00000412104 TRBV5-3A0A0A0MS03 114 aa23.79■■□□□ 1.4
VRK2-202ENST00000412104 HNF4AP41235 474 aa23.79■■□□□ 1.4
VRK2-202ENST00000412104 CCT8P50990 548 aa23.79■■□□□ 1.4
VRK2-202ENST00000412104 PCDH1Q08174 1060 aa23.79■■□□□ 1.4
VRK2-202ENST00000412104 CNTN1Q12860 1018 aa23.79■■□□□ 1.4
VRK2-202ENST00000412104 RUNDC3AQ59EK9 446 aa23.79■■□□□ 1.4
VRK2-202ENST00000412104 ZNF547Q8IVP9 402 aa23.79■■□□□ 1.4
VRK2-202ENST00000412104 OR2T12Q8NG77 320 aa23.79■■□□□ 1.4
VRK2-202ENST00000412104 CSGALNACT1Q8TDX6 532 aa23.79■■□□□ 1.4
VRK2-202ENST00000412104 CDCA3Q99618 268 aaPredicted RBP23.79■■□□□ 1.4
VRK2-202ENST00000412104 EBPLQ9BY08 206 aa23.79■■□□□ 1.4
VRK2-202ENST00000412104 PBX4Q9BYU1 374 aa23.79■■□□□ 1.4
VRK2-202ENST00000412104 PLA2G2FQ9BZM2 168 aa23.79■■□□□ 1.4
VRK2-202ENST00000412104 PAIP1Q9H074 479 aaKnown RBP23.79■■□□□ 1.4
VRK2-202ENST00000412104 SERHLQ9NQF3 203 aa23.79■■□□□ 1.4
VRK2-202ENST00000412104 MAN2B2Q9Y2E5 1009 aa23.79■■□□□ 1.4
VRK2-202ENST00000412104 V9GYQ6 96 aa23.79■■□□□ 1.4
VRK2-202ENST00000412104 EPOPA6NHQ4 379 aa23.78■■□□□ 1.4
VRK2-202ENST00000412104 H0YIV9 168 aa23.78■■□□□ 1.4
VRK2-202ENST00000412104 KAT7O95251 611 aa23.78■■□□□ 1.4
VRK2-202ENST00000412104 PCSK2P16519 638 aa23.78■■□□□ 1.4
VRK2-202ENST00000412104 INTS11Q5TA45 600 aaKnown RBP23.78■■□□□ 1.4
VRK2-202ENST00000412104 EGFLAMQ63HQ2 1017 aa23.78■■□□□ 1.4
VRK2-202ENST00000412104 CHERPQ8IWX8 916 aaKnown RBP23.78■■□□□ 1.4
VRK2-202ENST00000412104 RIMKLAQ8IXN7 391 aa23.78■■□□□ 1.4
VRK2-202ENST00000412104 TBC1D21Q8IYX1 336 aa23.78■■□□□ 1.4
VRK2-202ENST00000412104 OR10A6Q8NH74 314 aa23.78■■□□□ 1.4
VRK2-202ENST00000412104 DNAJB8Q8NHS0 232 aa23.78■■□□□ 1.4
VRK2-202ENST00000412104 CHFRQ96EP1 664 aa23.78■■□□□ 1.4
VRK2-202ENST00000412104 ZNF514Q96K75 400 aaPredicted RBP23.78■■□□□ 1.4
VRK2-202ENST00000412104 EGLN2Q96KS0 407 aa23.78■■□□□ 1.4
VRK2-202ENST00000412104 LINC00615Q96LM1 132 aaPredicted RBP23.78■■□□□ 1.4
VRK2-202ENST00000412104 MTERF1Q99551 399 aaKnown RBP23.78■■□□□ 1.4
VRK2-202ENST00000412104 SLC6A13Q9NSD5 602 aa23.78■■□□□ 1.4
VRK2-202ENST00000412104 SPATA6Q9NWH7 488 aaPredicted RBP23.78■■□□□ 1.4
VRK2-202ENST00000412104 FADS3Q9Y5Q0 445 aa23.78■■□□□ 1.4
VRK2-202ENST00000412104 C5orf42Q9H799 3197 aa23.78■■□□□ 1.4
VRK2-202ENST00000412104 DOCK8Q8NF50 2099 aa23.78■■□□□ 1.4
VRK2-202ENST00000412104 ARHGAP10A1A4S6 786 aa23.78■■□□□ 1.4
VRK2-202ENST00000412104 LRATO95237 230 aa23.78■■□□□ 1.4
VRK2-202ENST00000412104 ZNF8P17098 575 aaPredicted RBP23.78■■□□□ 1.4
VRK2-202ENST00000412104 DDX39BQ13838 428 aaKnown RBP23.78■■□□□ 1.4
VRK2-202ENST00000412104 LRIF1Q5T3J3 769 aa23.78■■□□□ 1.4
VRK2-202ENST00000412104 CRTC3Q6UUV7 619 aa23.78■■□□□ 1.4
VRK2-202ENST00000412104 AADATQ8N5Z0 425 aa23.78■■□□□ 1.4
VRK2-202ENST00000412104 PACRGLQ8N7B6 248 aa23.78■■□□□ 1.4
VRK2-202ENST00000412104 ZNF548Q8NEK5 533 aaPredicted RBP23.78■■□□□ 1.4
VRK2-202ENST00000412104 ZNF480Q8WV37 535 aa23.78■■□□□ 1.4
VRK2-202ENST00000412104 SEPHS2Q99611 448 aa23.78■■□□□ 1.4
VRK2-202ENST00000412104 SH3GL1Q99961 368 aa23.78■■□□□ 1.4
VRK2-202ENST00000412104 KCNH6Q9H252 994 aa23.78■■□□□ 1.4
VRK2-202ENST00000412104 VPS29Q9UBQ0 182 aa23.78■■□□□ 1.4
VRK2-202ENST00000412104 MAP3K13O43283 966 aa23.77■■□□□ 1.4
VRK2-202ENST00000412104 ERN1O75460 977 aaKnown RBP23.77■■□□□ 1.4
VRK2-202ENST00000412104 ANXA6P08133 673 aa23.77■■□□□ 1.4
VRK2-202ENST00000412104 POLE2P56282 527 aa23.77■■□□□ 1.4
VRK2-202ENST00000412104 PGS1Q32NB8 556 aa23.77■■□□□ 1.4
VRK2-202ENST00000412104 PIP5KL1Q5T9C9 394 aa23.77■■□□□ 1.4
VRK2-202ENST00000412104 FOXB2Q5VYV0 432 aa23.77■■□□□ 1.4
VRK2-202ENST00000412104 CBR4Q8N4T8 237 aa23.77■■□□□ 1.4
VRK2-202ENST00000412104 RAB7BQ96AH8 199 aa23.77■■□□□ 1.4
VRK2-202ENST00000412104 HHIPQ96QV1 700 aa23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms