RNA–Protein interactions for RNA: ENST00000411651.6

SUMO3-204, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2 BASIC

Gene SUMO3, Length 1,921 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-204ENST00000411651 EPB41L1Q9H4G0 881 aa19.59■□□□□ 0.73
SUMO3-204ENST00000411651 GULP1Q9UBP9 304 aa19.59■□□□□ 0.73
SUMO3-204ENST00000411651 PCDHGA11Q9Y5H2 935 aa19.59■□□□□ 0.73
SUMO3-204ENST00000411651 TCF20Q9UGU0 1960 aaKnown RBP19.58■□□□□ 0.73
SUMO3-204ENST00000411651 DFNA5O60443 496 aa19.58■□□□□ 0.72
SUMO3-204ENST00000411651 HOXB9P17482 250 aaPredicted RBP19.58■□□□□ 0.72
SUMO3-204ENST00000411651 S100A3P33764 101 aa19.58■□□□□ 0.72
SUMO3-204ENST00000411651 GPR1P46091 355 aa19.58■□□□□ 0.72
SUMO3-204ENST00000411651 SELPLGQ14242 412 aa19.58■□□□□ 0.72
SUMO3-204ENST00000411651 MSRB3Q8IXL7 192 aa19.58■□□□□ 0.72
SUMO3-204ENST00000411651 KRTCAP2Q8N6L1 136 aa19.58■□□□□ 0.72
SUMO3-204ENST00000411651 ZNF548Q8NEK5 533 aaPredicted RBP19.58■□□□□ 0.72
SUMO3-204ENST00000411651 SUSD6Q92537 303 aa19.58■□□□□ 0.72
SUMO3-204ENST00000411651 MTFMTQ96DP5 389 aaKnown RBP19.58■□□□□ 0.72
SUMO3-204ENST00000411651 WDR34Q96EX3 536 aa19.58■□□□□ 0.72
SUMO3-204ENST00000411651 C11orf24Q96F05 449 aaPredicted RBP19.58■□□□□ 0.72
SUMO3-204ENST00000411651 ZFYVE19Q96K21 471 aa19.58■□□□□ 0.72
SUMO3-204ENST00000411651 SLC29A1Q99808 456 aa19.58■□□□□ 0.72
SUMO3-204ENST00000411651 ITM2CQ9NQX7 267 aa19.58■□□□□ 0.72
SUMO3-204ENST00000411651 NDUFA13Q9P0J0 144 aa19.58■□□□□ 0.72
SUMO3-204ENST00000411651 VPS29Q9UBQ0 182 aa19.58■□□□□ 0.72
SUMO3-204ENST00000411651 ZNF639Q9UID6 485 aa19.58■□□□□ 0.72
SUMO3-204ENST00000411651 RUVBL1Q9Y265 456 aaKnown RBP19.58■□□□□ 0.72
SUMO3-204ENST00000411651 SCELO95171 688 aa19.57■□□□□ 0.72
SUMO3-204ENST00000411651 C1orf105O95561 183 aa19.57■□□□□ 0.72
SUMO3-204ENST00000411651 HLA-EP13747 358 aa19.57■□□□□ 0.72
SUMO3-204ENST00000411651 IL1RNP18510 177 aa19.57■□□□□ 0.72
SUMO3-204ENST00000411651 PREPP48147 710 aa19.57■□□□□ 0.72
SUMO3-204ENST00000411651 SRSF11Q05519 484 aaKnown RBP19.57■□□□□ 0.72
SUMO3-204ENST00000411651 NRF1Q16656 503 aa19.57■□□□□ 0.72
SUMO3-204ENST00000411651 XKR6Q5GH73 641 aa19.57■□□□□ 0.72
SUMO3-204ENST00000411651 NHSL2Q5HYW2 709 aa19.57■□□□□ 0.72
SUMO3-204ENST00000411651 C6orf52Q5T4I8 152 aa19.57■□□□□ 0.72
SUMO3-204ENST00000411651 FAM46CQ5VWP2 391 aa19.57■□□□□ 0.72
SUMO3-204ENST00000411651 RAET1GQ6H3X3 334 aa19.57■□□□□ 0.72
SUMO3-204ENST00000411651 NOXRED1Q6NXP6 359 aa19.57■□□□□ 0.72
SUMO3-204ENST00000411651 TMEM132CQ8N3T6 1108 aa19.57■□□□□ 0.72
SUMO3-204ENST00000411651 HM13Q8TCT9 377 aa19.57■□□□□ 0.72
SUMO3-204ENST00000411651 APIPQ96GX9 242 aa19.57■□□□□ 0.72
SUMO3-204ENST00000411651 PKP4Q99569 1192 aa19.57■□□□□ 0.72
SUMO3-204ENST00000411651 PAIP1Q9H074 479 aaKnown RBP19.57■□□□□ 0.72
SUMO3-204ENST00000411651 SERHLQ9NQF3 203 aa19.57■□□□□ 0.72
SUMO3-204ENST00000411651 SLC25A37Q9NYZ2 338 aa19.57■□□□□ 0.72
SUMO3-204ENST00000411651 NIPSNAP3AQ9UFN0 247 aaPredicted RBP19.57■□□□□ 0.72
SUMO3-204ENST00000411651 KCNE2Q9Y6J6 123 aa19.57■□□□□ 0.72
SUMO3-204ENST00000411651 LRRK1Q38SD2 2015 aa19.57■□□□□ 0.72
SUMO3-204ENST00000411651 GRXCR1A8MXD5 290 aa19.57■□□□□ 0.72
SUMO3-204ENST00000411651 FAM220BPB1ANY3 271 aa19.57■□□□□ 0.72
SUMO3-204ENST00000411651 LZTS3O60299 673 aaPredicted RBP19.57■□□□□ 0.72
SUMO3-204ENST00000411651 RASAL1O95294 804 aa19.57■□□□□ 0.72
SUMO3-204ENST00000411651 SLC16A8O95907 504 aa19.57■□□□□ 0.72
SUMO3-204ENST00000411651 CD22P20273 847 aa19.57■□□□□ 0.72
SUMO3-204ENST00000411651 OPRD1P41143 372 aa19.57■□□□□ 0.72
SUMO3-204ENST00000411651 NEK2P51955 445 aa19.57■□□□□ 0.72
SUMO3-204ENST00000411651 NAE1Q13564 534 aa19.57■□□□□ 0.72
SUMO3-204ENST00000411651 DOC2AQ14183 400 aa19.57■□□□□ 0.72
SUMO3-204ENST00000411651 AAK1Q2M2I8 961 aa19.57■□□□□ 0.72
SUMO3-204ENST00000411651 TMEM184AQ6ZMB5 413 aa19.57■□□□□ 0.72
SUMO3-204ENST00000411651 EPHX4Q8IUS5 362 aa19.57■□□□□ 0.72
SUMO3-204ENST00000411651 REPS1Q96D71 796 aa19.57■□□□□ 0.72
SUMO3-204ENST00000411651 EHD1Q9H4M9 534 aa19.57■□□□□ 0.72
SUMO3-204ENST00000411651 E7EQ34 232 aa19.56■□□□□ 0.72
SUMO3-204ENST00000411651 PRSS23O95084 383 aa19.56■□□□□ 0.72
SUMO3-204ENST00000411651 LDLRP01130 860 aa19.56■□□□□ 0.72
SUMO3-204ENST00000411651 RETP07949 1114 aa19.56■□□□□ 0.72
SUMO3-204ENST00000411651 RAP2AP10114 183 aa19.56■□□□□ 0.72
SUMO3-204ENST00000411651 NCK1P16333 377 aa19.56■□□□□ 0.72
SUMO3-204ENST00000411651 TRPC1P48995 793 aa19.56■□□□□ 0.72
SUMO3-204ENST00000411651 METAP1P53582 386 aa19.56■□□□□ 0.72
SUMO3-204ENST00000411651 RPA4Q13156 261 aa19.56■□□□□ 0.72
SUMO3-204ENST00000411651 RUNX3Q13761 415 aa19.56■□□□□ 0.72
SUMO3-204ENST00000411651 FAM109BQ6ICB4 259 aaPredicted RBP19.56■□□□□ 0.72
SUMO3-204ENST00000411651 ADAMTSL4Q6UY14 1074 aa19.56■□□□□ 0.72
SUMO3-204ENST00000411651 GET4Q7L5D6 327 aaPredicted RBP19.56■□□□□ 0.72
SUMO3-204ENST00000411651 GPR180Q86V85 440 aa19.56■□□□□ 0.72
SUMO3-204ENST00000411651 CALHM3Q86XJ0 350 aa19.56■□□□□ 0.72
SUMO3-204ENST00000411651 OR2L2Q8NH16 312 aa19.56■□□□□ 0.72
SUMO3-204ENST00000411651 CNBD2Q96M20 576 aa19.56■□□□□ 0.72
SUMO3-204ENST00000411651 OR4K3Q96R72 315 aa19.56■□□□□ 0.72
SUMO3-204ENST00000411651 CPPED1Q9BRF8 314 aaPredicted RBP19.56■□□□□ 0.72
SUMO3-204ENST00000411651 BDH2Q9BUT1 245 aa19.56■□□□□ 0.72
SUMO3-204ENST00000411651 UGT2B28Q9BY64 529 aa19.56■□□□□ 0.72
SUMO3-204ENST00000411651 KAT8Q9H7Z6 458 aaKnown RBP19.56■□□□□ 0.72
SUMO3-204ENST00000411651 SIRT5Q9NXA8 310 aa19.56■□□□□ 0.72
SUMO3-204ENST00000411651 ELOVL7A1L3X0 281 aa19.55■□□□□ 0.72
SUMO3-204ENST00000411651 SOCS2O14508 198 aa19.55■□□□□ 0.72
SUMO3-204ENST00000411651 PABPC4LP0CB38 370 aaKnown RBP19.55■□□□□ 0.72
SUMO3-204ENST00000411651 CKMT2P17540 419 aa19.55■□□□□ 0.72
SUMO3-204ENST00000411651 ADRM1Q16186 407 aa19.55■□□□□ 0.72
SUMO3-204ENST00000411651 LIN52Q52LA3 116 aa19.55■□□□□ 0.72
SUMO3-204ENST00000411651 FAM98BQ52LJ0 330 aaKnown RBP19.55■□□□□ 0.72
SUMO3-204ENST00000411651 CAPN13Q6MZZ7 669 aaPredicted RBP19.55■□□□□ 0.72
SUMO3-204ENST00000411651 VITQ6UXI7 678 aa19.55■□□□□ 0.72
SUMO3-204ENST00000411651 UNC5DQ6UXZ4 953 aa19.55■□□□□ 0.72
SUMO3-204ENST00000411651 RALGPS2Q86X27 583 aaPredicted RBP19.55■□□□□ 0.72
SUMO3-204ENST00000411651 CXorf40AQ8TE69 158 aa19.55■□□□□ 0.72
SUMO3-204ENST00000411651 TFAP2CQ92754 450 aa19.55■□□□□ 0.72
SUMO3-204ENST00000411651 COX14Q96I36 57 aa19.55■□□□□ 0.72
SUMO3-204ENST00000411651 APOLD1Q96LR9 279 aa19.55■□□□□ 0.72
SUMO3-204ENST00000411651 THUMPD3Q9BV44 507 aaKnown RBP19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms