RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 SLC22A14Q9Y267 594 aa13.19□□□□□ -0.3
LIMS1-205ENST00000410093 DNMT3AQ9Y6K1 912 aaPredicted RBP13.19□□□□□ -0.3
LIMS1-205ENST00000410093 C2orf16Q68DN1 1984 aa13.19□□□□□ -0.3
LIMS1-205ENST00000410093 SMIM31A0A1B0GVY4 71 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 H3BM21 787 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 INPP4BO15327 924 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 TSPAN6O43657 245 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 SCELO95171 688 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 ANXA6P08133 673 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 ADRB3P13945 408 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 GGT1P19440 569 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 HALP42357 657 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 ASMTP46597 345 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 TRPC1P48995 793 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 RPA4Q13156 261 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 CHIT1Q13231 466 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 ATP6AP1Q15904 470 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 FAM174BQ3ZCQ3 159 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 FAM98BQ52LJ0 330 aaKnown RBP13.18□□□□□ -0.3
LIMS1-205ENST00000410093 RUNDC3AQ59EK9 446 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 RABL3Q5HYI8 236 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 LRRC73Q5JTD7 316 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 GLYATQ6IB77 296 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 ANKRD54Q6NXT1 300 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 NEK5Q6P3R8 708 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 TMEM220Q6QAJ8 160 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 AGTRAPQ6RW13 159 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 SERPINA13PQ6UXR4 307 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 TMEM184AQ6ZMB5 413 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 MBOAT1Q6ZNC8 495 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 TERB1Q8NA31 727 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 SUSD6Q92537 303 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 HHIPQ96QV1 700 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 OR52E6Q96RD3 313 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 EHD1Q9H4M9 534 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 CD320Q9NPF0 282 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 INTS7Q9NVH2 962 aaKnown RBP13.18□□□□□ -0.3
LIMS1-205ENST00000410093 VPS29Q9UBQ0 182 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 EGFL7Q9UHF1 273 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 AURKCQ9UQB9 309 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 KCNE2Q9Y6J6 123 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 AP1M2Q9Y6Q5 423 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 NCOR1O75376 2440 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 MUC3AQ02505 3323 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 LRRK1Q38SD2 2015 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 OR2AG2A6NM03 316 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 HEPACAM2A8MVW5 462 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 ARHGEF33A8MVX0 844 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 GPR89AB7ZAQ6 455 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 TIPRLO75663 272 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 LDLRP01130 860 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 LINGO3P0C6S8 592 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 GPR89BP0CG08 455 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 RAP2AP10114 183 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 AMD1P17707 334 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 GPR1P46091 355 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 CCT8P50990 548 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 HMGCS1Q01581 520 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 PRKCQQ04759 706 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 ZP2Q05996 745 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 LAPTM5Q13571 262 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 PTGR1Q14914 329 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 ZNF658BQ4V348 819 aaPredicted RBP13.18□□□□□ -0.3
LIMS1-205ENST00000410093 SGO1Q5FBB7 561 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 HMBOX1Q6NT76 420 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 UNC5DQ6UXZ4 953 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 ERN2Q76MJ5 926 aaKnown RBP13.18□□□□□ -0.3
LIMS1-205ENST00000410093 SPRED1Q7Z699 444 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 OR2T12Q8NG77 320 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 FGF13Q92913 245 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 CXorf40BQ96DE9 158 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 WDR34Q96EX3 536 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 SPATA9Q9BWV2 254 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 MRPS26Q9BYN8 205 aaKnown RBP13.18□□□□□ -0.3
LIMS1-205ENST00000410093 FARSBQ9NSD9 589 aaKnown RBP13.18□□□□□ -0.3
LIMS1-205ENST00000410093 SPATA6Q9NWH7 488 aaPredicted RBP13.18□□□□□ -0.3
LIMS1-205ENST00000410093 SIRT5Q9NXA8 310 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 STOX2Q9P2F5 926 aaPredicted RBP13.18□□□□□ -0.3
LIMS1-205ENST00000410093 ZNHIT2Q9UHR6 403 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 TSC22D4Q9Y3Q8 395 aa13.18□□□□□ -0.3
LIMS1-205ENST00000410093 ATG2AQ2TAZ0 1938 aa13.17□□□□□ -0.3
LIMS1-205ENST00000410093 FAM220BPB1ANY3 271 aa13.17□□□□□ -0.3
LIMS1-205ENST00000410093 PRRT4C9JH25 899 aa13.17□□□□□ -0.3
LIMS1-205ENST00000410093 C9JVG2 144 aa13.17□□□□□ -0.3
LIMS1-205ENST00000410093 GSTA4O15217 222 aa13.17□□□□□ -0.3
LIMS1-205ENST00000410093 LZTS3O60299 673 aaPredicted RBP13.17□□□□□ -0.3
LIMS1-205ENST00000410093 DEAF1O75398 565 aaPredicted RBP13.17□□□□□ -0.3
LIMS1-205ENST00000410093 RECQL5O94762 991 aaPredicted RBP13.17□□□□□ -0.3
LIMS1-205ENST00000410093 RETP07949 1114 aa13.17□□□□□ -0.3
LIMS1-205ENST00000410093 ZCCHC18P0CG32 403 aa13.17□□□□□ -0.3
LIMS1-205ENST00000410093 TEAD1P28347 426 aa13.17□□□□□ -0.3
LIMS1-205ENST00000410093 HSD17B2P37059 387 aa13.17□□□□□ -0.3
LIMS1-205ENST00000410093 CYP4F3Q08477 520 aa13.17□□□□□ -0.3
LIMS1-205ENST00000410093 FCHO2Q0JRZ9 810 aa13.17□□□□□ -0.3
LIMS1-205ENST00000410093 MTAPQ13126 283 aa13.17□□□□□ -0.3
LIMS1-205ENST00000410093 GAB4Q2WGN9 574 aa13.17□□□□□ -0.3
LIMS1-205ENST00000410093 SPIN4Q56A73 249 aa13.17□□□□□ -0.3
LIMS1-205ENST00000410093 XKR6Q5GH73 641 aa13.17□□□□□ -0.3
LIMS1-205ENST00000410093 PAGE2BQ5JRK9 111 aa13.17□□□□□ -0.3
LIMS1-205ENST00000410093 CAPN13Q6MZZ7 669 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms