RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 PLSCR1O15162 318 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 BMP1P13497 986 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 CYP3A7P24462 503 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 KCNQ1P51787 676 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 ST3GAL4Q11206 333 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 IL17AQ16552 155 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 PTCD3Q96EY7 689 aaKnown RBP8.23□□□□□ -1.09
SCN9A-203ENST00000409672 SLC5A7Q9GZV3 580 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 GDF3Q9NR23 364 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 SLC22A14Q9Y267 594 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 BACE2Q9Y5Z0 518 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 NIPSNAP2O75323 286 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 F10P00742 488 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 OPN1SWP03999 348 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 BCHEP06276 602 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 GTF2BQ00403 316 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 ABHD15Q6UXT9 468 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 LRRTM4Q86VH4 590 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 LRRN4CLQ8ND94 238 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 MGME1Q9BQP7 344 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 USP29Q9HBJ7 922 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 FAM118AQ9NWS6 357 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 GSKIPQ9P0R6 139 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 GNG8Q9UK08 70 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 TARBP1Q13395 1621 aaKnown RBP8.23□□□□□ -1.09
SCN9A-203ENST00000409672 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.23□□□□□ -1.09
SCN9A-203ENST00000409672 J3QLW9 94 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 PLK4O00444 970 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 PPEF2O14830 753 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 MPPED1O15442 326 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 EOMESO95936 686 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 ZNF19P17023 458 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 ENDOUP21128 410 aaKnown RBP8.23□□□□□ -1.09
SCN9A-203ENST00000409672 ADSSP30520 456 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 ZNF844Q08AG5 666 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 SNTA1Q13424 505 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 ZFP1Q6P2D0 407 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 NINJ1Q92982 152 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 SUV39H2Q9H5I1 410 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 RNF186Q9NXI6 227 aa8.23□□□□□ -1.09
SCN9A-203ENST00000409672 PPRC1Q5VV67 1664 aaKnown RBP8.22□□□□□ -1.09
SCN9A-203ENST00000409672 KDM4FA0A1W2PPD8 638 aa8.22□□□□□ -1.09
SCN9A-203ENST00000409672 SOWAHBA6NEL2 793 aa8.22□□□□□ -1.09
SCN9A-203ENST00000409672 SYN3O14994 580 aa8.22□□□□□ -1.09
SCN9A-203ENST00000409672 SOX30O94993 753 aa8.22□□□□□ -1.09
SCN9A-203ENST00000409672 ZNF792Q3KQV3 632 aa8.22□□□□□ -1.09
SCN9A-203ENST00000409672 SLC35F1Q5T1Q4 408 aa8.22□□□□□ -1.09
SCN9A-203ENST00000409672 ZNF776Q68DI1 518 aaPredicted RBP8.22□□□□□ -1.09
SCN9A-203ENST00000409672 SORCS1Q8WY21 1168 aa8.22□□□□□ -1.09
SCN9A-203ENST00000409672 SLC35C1Q96A29 364 aa8.22□□□□□ -1.09
SCN9A-203ENST00000409672 NSMCE3Q96MG7 304 aa8.22□□□□□ -1.09
SCN9A-203ENST00000409672 ALPK1Q96QP1 1244 aa8.22□□□□□ -1.09
SCN9A-203ENST00000409672 KCNK13Q9HB14 408 aa8.22□□□□□ -1.09
SCN9A-203ENST00000409672 hCG_1818297A0A087WSY0 165 aa8.22□□□□□ -1.09
SCN9A-203ENST00000409672 FAM221BA6H8Z2 402 aa8.22□□□□□ -1.09
SCN9A-203ENST00000409672 PCDH7O60245 1069 aa8.22□□□□□ -1.09
SCN9A-203ENST00000409672 GADD45GO95257 159 aa8.22□□□□□ -1.09
SCN9A-203ENST00000409672 KHDC1LQ5JSQ8 128 aa8.22□□□□□ -1.09
SCN9A-203ENST00000409672 LIX1LQ8IVB5 337 aa8.22□□□□□ -1.09
SCN9A-203ENST00000409672 NSMAFQ92636 917 aa8.22□□□□□ -1.09
SCN9A-203ENST00000409672 TDP1Q9NUW8 608 aa8.22□□□□□ -1.09
SCN9A-203ENST00000409672 CLUHO75153 1309 aa8.22□□□□□ -1.09
SCN9A-203ENST00000409672 FEZF1A0PJY2 475 aa8.22□□□□□ -1.09
SCN9A-203ENST00000409672 SYPP08247 313 aa8.22□□□□□ -1.09
SCN9A-203ENST00000409672 ZNF3P17036 446 aa8.22□□□□□ -1.09
SCN9A-203ENST00000409672 TTKP33981 857 aa8.22□□□□□ -1.09
SCN9A-203ENST00000409672 RPS15P62841 145 aaKnown RBP8.22□□□□□ -1.09
SCN9A-203ENST00000409672 ARG2P78540 354 aa8.22□□□□□ -1.09
SCN9A-203ENST00000409672 PLP2Q04941 152 aa8.22□□□□□ -1.09
SCN9A-203ENST00000409672 SLC10A7Q0GE19 358 aa8.22□□□□□ -1.09
SCN9A-203ENST00000409672 UBE2UQ5VVX9 321 aa8.22□□□□□ -1.09
SCN9A-203ENST00000409672 TXNDC5Q8NBS9 432 aaKnown RBP8.22□□□□□ -1.09
SCN9A-203ENST00000409672 FAM156AQ8NDB6 213 aa8.22□□□□□ -1.09
SCN9A-203ENST00000409672 SLC22A17Q8WUG5 538 aa8.22□□□□□ -1.09
SCN9A-203ENST00000409672 SLCO1B3Q9NPD5 702 aa8.22□□□□□ -1.09
SCN9A-203ENST00000409672 DKK3Q9UBP4 350 aa8.22□□□□□ -1.09
SCN9A-203ENST00000409672 ING4Q9UNL4 249 aa8.22□□□□□ -1.09
SCN9A-203ENST00000409672 HCRTO43612 131 aa8.22□□□□□ -1.09
SCN9A-203ENST00000409672 PRAMEF17Q5VTA0 474 aa8.22□□□□□ -1.09
SCN9A-203ENST00000409672 PIWIL4Q7Z3Z4 852 aaKnown RBP8.22□□□□□ -1.09
SCN9A-203ENST00000409672 TDRPQ86YL5 185 aa8.22□□□□□ -1.09
SCN9A-203ENST00000409672 DNAJC27Q9NZQ0 273 aa8.22□□□□□ -1.09
SCN9A-203ENST00000409672 MRPL3P09001 348 aaKnown RBP8.22□□□□□ -1.09
SCN9A-203ENST00000409672 PRKD1Q15139 912 aaPredicted RBP8.22□□□□□ -1.09
SCN9A-203ENST00000409672 TMEM35AQ53FP2 167 aa8.22□□□□□ -1.09
SCN9A-203ENST00000409672 LPCAT4Q643R3 524 aa8.22□□□□□ -1.09
SCN9A-203ENST00000409672 ERICH5Q6P6B1 374 aa8.22□□□□□ -1.09
SCN9A-203ENST00000409672 TCAIMQ8N3R3 496 aa8.22□□□□□ -1.09
SCN9A-203ENST00000409672 FBXW8Q8N3Y1 598 aa8.22□□□□□ -1.09
SCN9A-203ENST00000409672 OR52E4Q8NGH9 312 aa8.22□□□□□ -1.09
SCN9A-203ENST00000409672 NPLOC4Q8TAT6 608 aa8.22□□□□□ -1.09
SCN9A-203ENST00000409672 LRRC58Q96CX6 371 aa8.22□□□□□ -1.09
SCN9A-203ENST00000409672 KAZALD1Q96I82 304 aa8.22□□□□□ -1.09
SCN9A-203ENST00000409672 CXorf56Q9H5V9 222 aa8.22□□□□□ -1.09
SCN9A-203ENST00000409672 DENND2DQ9H6A0 471 aaPredicted RBP8.22□□□□□ -1.09
SCN9A-203ENST00000409672 TRPS1Q9UHF7 1281 aa8.22□□□□□ -1.09
SCN9A-203ENST00000409672 TCRBV9S1A1TA0A576 114 aa8.22□□□□□ -1.09
SCN9A-203ENST00000409672 LHCGRP22888 699 aa8.22□□□□□ -1.09
SCN9A-203ENST00000409672 AP1S1P61966 158 aa8.22□□□□□ -1.09
SCN9A-203ENST00000409672 ZNF267Q14586 743 aaPredicted RBP8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms