RNA–Protein interactions for RNA: ENST00000409627.6

SUMO1-208, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3

Gene SUMO1, Length 722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-208ENST00000409627 FBXO39Q8N4B4 442 aa16.05■□□□□ 0.16
SUMO1-208ENST00000409627 RDH11Q8TC12 318 aa16.05■□□□□ 0.16
SUMO1-208ENST00000409627 ARL8AQ96BM9 186 aa16.05■□□□□ 0.16
SUMO1-208ENST00000409627 MED8Q96G25 268 aa16.05■□□□□ 0.16
SUMO1-208ENST00000409627 TGM7Q96PF1 710 aa16.05■□□□□ 0.16
SUMO1-208ENST00000409627 PCBD2Q9H0N5 130 aa16.05■□□□□ 0.16
SUMO1-208ENST00000409627 CNOT10Q9H9A5 744 aaKnown RBP16.05■□□□□ 0.16
SUMO1-208ENST00000409627 TMEM9Q9P0T7 183 aa16.05■□□□□ 0.16
SUMO1-208ENST00000409627 MID2Q9UJV3 735 aa16.05■□□□□ 0.16
SUMO1-208ENST00000409627 PCDHB11Q9Y5F2 797 aa16.05■□□□□ 0.16
SUMO1-208ENST00000409627 ADAMTS20P59510 1910 aa16.05■□□□□ 0.16
SUMO1-208ENST00000409627 TLCD2A6NGC4 264 aa16.04■□□□□ 0.16
SUMO1-208ENST00000409627 STX16-NPEPL1H3BU86 382 aa16.04■□□□□ 0.16
SUMO1-208ENST00000409627 STX16O14662 325 aa16.04■□□□□ 0.16
SUMO1-208ENST00000409627 TOX3O15405 576 aaPredicted RBP16.04■□□□□ 0.16
SUMO1-208ENST00000409627 PRPF4O43172 522 aaKnown RBP eCLIP16.04■□□□□ 0.162e-15■■■■■ 30.3
SUMO1-208ENST00000409627 THRAP10827 490 aa16.04■□□□□ 0.16
SUMO1-208ENST00000409627 RPA3P35244 121 aaPredicted RBP16.04■□□□□ 0.16
SUMO1-208ENST00000409627 PDX1P52945 283 aa16.04■□□□□ 0.16
SUMO1-208ENST00000409627 MAGOHP61326 146 aaKnown RBP16.04■□□□□ 0.16
SUMO1-208ENST00000409627 NFKB2Q00653 900 aa16.04■□□□□ 0.16
SUMO1-208ENST00000409627 ZFP36L1Q07352 338 aaKnown RBP16.04■□□□□ 0.16
SUMO1-208ENST00000409627 TSTA3Q13630 321 aaPredicted RBP16.04■□□□□ 0.16
SUMO1-208ENST00000409627 PFKFB4Q16877 469 aa16.04■□□□□ 0.16
SUMO1-208ENST00000409627 PTCHD3Q3KNS1 767 aa16.04■□□□□ 0.16
SUMO1-208ENST00000409627 PRAMEF13Q5VWM6 474 aa16.04■□□□□ 0.16
SUMO1-208ENST00000409627 LCTLQ6UWM7 567 aa16.04■□□□□ 0.16
SUMO1-208ENST00000409627 PRSS42Q7Z5A4 293 aa16.04■□□□□ 0.16
SUMO1-208ENST00000409627 SLITRK4Q8IW52 837 aa16.04■□□□□ 0.16
SUMO1-208ENST00000409627 CACTIN-AS1Q8N1I8 211 aa16.04■□□□□ 0.16
SUMO1-208ENST00000409627 OR2A1Q8NGT9 310 aa16.04■□□□□ 0.16
SUMO1-208ENST00000409627 TCP10LQ8TDR4 215 aa16.04■□□□□ 0.16
SUMO1-208ENST00000409627 ADAMTS14Q8WXS8 1223 aa16.04■□□□□ 0.16
SUMO1-208ENST00000409627 ATP6V1G3Q96LB4 118 aa16.04■□□□□ 0.16
SUMO1-208ENST00000409627 TMEM74Q96NL1 305 aa16.04■□□□□ 0.16
SUMO1-208ENST00000409627 PITPNM3Q9BZ71 974 aa16.04■□□□□ 0.16
SUMO1-208ENST00000409627 C1GALT1Q9NS00 363 aa16.04■□□□□ 0.16
SUMO1-208ENST00000409627 SEMA5BQ9P283 1151 aa16.04■□□□□ 0.16
SUMO1-208ENST00000409627 PTPRBP23467 1997 aa16.04■□□□□ 0.16
SUMO1-208ENST00000409627 IGHV5-10-1A0A0J9YXX1 117 aa16.03■□□□□ 0.16
SUMO1-208ENST00000409627 A0A0J9YY10 115 aa16.03■□□□□ 0.16
SUMO1-208ENST00000409627 A8MT66 165 aa16.03■□□□□ 0.16
SUMO1-208ENST00000409627 STK16O75716 305 aa16.03■□□□□ 0.16
SUMO1-208ENST00000409627 CCNDBP1O95273 360 aa16.03■□□□□ 0.16
SUMO1-208ENST00000409627 MT-CO3P00414 261 aa16.03■□□□□ 0.16
SUMO1-208ENST00000409627 ANKRD34CP0C6C1 535 aa16.03■□□□□ 0.16
SUMO1-208ENST00000409627 ATP5F1P24539 256 aaPredicted RBP16.03■□□□□ 0.16
SUMO1-208ENST00000409627 PSMB5P28074 263 aa16.03■□□□□ 0.16
SUMO1-208ENST00000409627 CCKBRP32239 447 aa16.03■□□□□ 0.16
SUMO1-208ENST00000409627 HSPA7P48741 367 aa16.03■□□□□ 0.16
SUMO1-208ENST00000409627 ABATP80404 500 aa16.03■□□□□ 0.16
SUMO1-208ENST00000409627 TRA2AQ13595 282 aaKnown RBP eCLIP16.03■□□□□ 0.16
SUMO1-208ENST00000409627 C18orf21Q32NC0 220 aaPredicted RBP16.03■□□□□ 0.16
SUMO1-208ENST00000409627 TTMPQ5BVD1 217 aa16.03■□□□□ 0.16
SUMO1-208ENST00000409627 HES3Q5TGS1 186 aa16.03■□□□□ 0.16
SUMO1-208ENST00000409627 METTL2BQ6P1Q9 378 aaKnown RBP16.03■□□□□ 0.16
SUMO1-208ENST00000409627 ZYG11AQ6WRX3 759 aa16.03■□□□□ 0.16
SUMO1-208ENST00000409627 FAM92BQ6ZTR7 304 aa16.03■□□□□ 0.16
SUMO1-208ENST00000409627 LRRC70Q7Z2Q7 622 aa16.03■□□□□ 0.16
SUMO1-208ENST00000409627 PTGR2Q8N8N7 351 aaPredicted RBP16.03■□□□□ 0.16
SUMO1-208ENST00000409627 OR2L3Q8NG85 312 aa16.03■□□□□ 0.16
SUMO1-208ENST00000409627 PYCR2Q96C36 320 aa16.03■□□□□ 0.16
SUMO1-208ENST00000409627 MAP3K3Q99759 626 aa16.03■□□□□ 0.16
SUMO1-208ENST00000409627 MIPEPQ99797 713 aa16.03■□□□□ 0.16
SUMO1-208ENST00000409627 HAUS8Q9BT25 410 aa16.03■□□□□ 0.16
SUMO1-208ENST00000409627 CD244Q9BZW8 370 aa16.03■□□□□ 0.16
SUMO1-208ENST00000409627 C12orf65Q9H3J6 166 aaKnown RBP16.03■□□□□ 0.16
SUMO1-208ENST00000409627 SEMA6CQ9H3T2 930 aa16.03■□□□□ 0.16
SUMO1-208ENST00000409627 INTS7Q9NVH2 962 aaKnown RBP16.03■□□□□ 0.16
SUMO1-208ENST00000409627 SLC17A7Q9P2U7 560 aa16.03■□□□□ 0.16
SUMO1-208ENST00000409627 TAC3Q9UHF0 121 aa16.03■□□□□ 0.16
SUMO1-208ENST00000409627 TNPO3Q9Y5L0 923 aaKnown RBP16.03■□□□□ 0.16
SUMO1-208ENST00000409627 HMGB1P1B2RPK0 211 aaPredicted RBP16.02■□□□□ 0.16
SUMO1-208ENST00000409627 G3V2L1 256 aa16.02■□□□□ 0.16
SUMO1-208ENST00000409627 TM9SF1O15321 606 aa16.02■□□□□ 0.16
SUMO1-208ENST00000409627 DLX3O60479 287 aa16.02■□□□□ 0.16
SUMO1-208ENST00000409627 WDR47O94967 919 aa16.02■□□□□ 0.16
SUMO1-208ENST00000409627 MYL2P10916 166 aa16.02■□□□□ 0.16
SUMO1-208ENST00000409627 CDH3P22223 829 aa16.02■□□□□ 0.16
SUMO1-208ENST00000409627 MPSTP25325 297 aa16.02■□□□□ 0.16
SUMO1-208ENST00000409627 CMPK1P30085 196 aa16.02■□□□□ 0.16
SUMO1-208ENST00000409627 LSSP48449 732 aa16.02■□□□□ 0.16
SUMO1-208ENST00000409627 AGTR2P50052 363 aa16.02■□□□□ 0.16
SUMO1-208ENST00000409627 INHBCP55103 352 aa16.02■□□□□ 0.16
SUMO1-208ENST00000409627 PRDX1Q06830 199 aaKnown RBP16.02■□□□□ 0.16
SUMO1-208ENST00000409627 NAA25Q14CX7 972 aa16.02■□□□□ 0.16
SUMO1-208ENST00000409627 PCBP2Q15366 365 aaKnown RBP eCLIP16.02■□□□□ 0.161e-8■■■■■ 39.3
SUMO1-208ENST00000409627 SF1Q15637 639 aaKnown RBP16.02■□□□□ 0.16
SUMO1-208ENST00000409627 THEMIS2Q5TEJ8 643 aa16.02■□□□□ 0.16
SUMO1-208ENST00000409627 CACHD1Q5VU97 1274 aa16.02■□□□□ 0.16
SUMO1-208ENST00000409627 ICE2Q659A1 982 aa16.02■□□□□ 0.16
SUMO1-208ENST00000409627 ARHGAP22Q7Z5H3 698 aa16.02■□□□□ 0.16
SUMO1-208ENST00000409627 THOC6Q86W42 341 aaKnown RBP16.02■□□□□ 0.16
SUMO1-208ENST00000409627 TMPRSS12Q86WS5 348 aa16.02■□□□□ 0.16
SUMO1-208ENST00000409627 SLC22A9Q8IVM8 553 aa16.02■□□□□ 0.16
SUMO1-208ENST00000409627 DCBLD1Q8N8Z6 715 aa16.02■□□□□ 0.16
SUMO1-208ENST00000409627 CCDC63Q8NA47 563 aa16.02■□□□□ 0.16
SUMO1-208ENST00000409627 CCDC126Q96EE4 140 aa16.02■□□□□ 0.16
SUMO1-208ENST00000409627 CCDC74BQ96LY2 380 aa16.02■□□□□ 0.16
SUMO1-208ENST00000409627 PPM1MQ96MI6 270 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms