RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 ZNF460Q14592 562 aa16.38■□□□□ 0.21
PCDHA13-202ENST00000409494 IFI44LQ53G44 452 aa16.38■□□□□ 0.21
PCDHA13-202ENST00000409494 LRRTM3Q86VH5 581 aa16.38■□□□□ 0.21
PCDHA13-202ENST00000409494 OR8H2Q8N162 312 aa16.38■□□□□ 0.21
PCDHA13-202ENST00000409494 ZNF366Q8N895 744 aa16.38■□□□□ 0.21
PCDHA13-202ENST00000409494 COX18Q8N8Q8 333 aa16.38■□□□□ 0.21
PCDHA13-202ENST00000409494 FADS3Q9Y5Q0 445 aa16.38■□□□□ 0.21
PCDHA13-202ENST00000409494 LINC00854A0A1B0GVQ3 168 aa16.38■□□□□ 0.21
PCDHA13-202ENST00000409494 HLA-EP13747 358 aa16.38■□□□□ 0.21
PCDHA13-202ENST00000409494 IL12BP29460 328 aa16.38■□□□□ 0.21
PCDHA13-202ENST00000409494 TRAF3Q13114 568 aa16.38■□□□□ 0.21
PCDHA13-202ENST00000409494 TRIM25Q14258 630 aaKnown RBP16.38■□□□□ 0.21
PCDHA13-202ENST00000409494 RNF44Q7L0R7 432 aa16.38■□□□□ 0.21
PCDHA13-202ENST00000409494 FAM129CQ86XR2 697 aa16.38■□□□□ 0.21
PCDHA13-202ENST00000409494 NR4A3Q92570 626 aa16.38■□□□□ 0.21
PCDHA13-202ENST00000409494 NXPE3Q969Y0 559 aa16.38■□□□□ 0.21
PCDHA13-202ENST00000409494 ZDHHC12Q96GR4 267 aa16.38■□□□□ 0.21
PCDHA13-202ENST00000409494 PRRG4Q9BZD6 226 aa16.38■□□□□ 0.21
PCDHA13-202ENST00000409494 USP3Q9Y6I4 520 aa16.38■□□□□ 0.21
PCDHA13-202ENST00000409494 FAM72CH0Y354 149 aa16.38■□□□□ 0.21
PCDHA13-202ENST00000409494 CASRP41180 1078 aa16.38■□□□□ 0.21
PCDHA13-202ENST00000409494 DSC1Q08554 894 aa16.38■□□□□ 0.21
PCDHA13-202ENST00000409494 MPP2Q14168 576 aa16.38■□□□□ 0.21
PCDHA13-202ENST00000409494 RGS21Q2M5E4 152 aa16.38■□□□□ 0.21
PCDHA13-202ENST00000409494 FAM72AQ5TYM5 149 aa16.38■□□□□ 0.21
PCDHA13-202ENST00000409494 LIPJQ5W064 366 aa16.38■□□□□ 0.21
PCDHA13-202ENST00000409494 FAM72DQ6L9T8 149 aa16.38■□□□□ 0.21
PCDHA13-202ENST00000409494 ZNF730Q6ZMV8 503 aa16.38■□□□□ 0.21
PCDHA13-202ENST00000409494 FAM72BQ86X60 149 aa16.38■□□□□ 0.21
PCDHA13-202ENST00000409494 LINC00471Q8N535 108 aa16.38■□□□□ 0.21
PCDHA13-202ENST00000409494 OR10H5Q8NGA6 315 aa16.38■□□□□ 0.21
PCDHA13-202ENST00000409494 FAM81AQ8TBF8 368 aa16.38■□□□□ 0.21
PCDHA13-202ENST00000409494 PIWIL1Q96J94 861 aaKnown RBP16.38■□□□□ 0.21
PCDHA13-202ENST00000409494 PIAS3Q9Y6X2 628 aa16.38■□□□□ 0.21
PCDHA13-202ENST00000409494 TLX3O43711 291 aaPredicted RBP16.37■□□□□ 0.21
PCDHA13-202ENST00000409494 DLX3O60479 287 aa16.37■□□□□ 0.21
PCDHA13-202ENST00000409494 EIF2B2P49770 351 aaKnown RBP16.37■□□□□ 0.21
PCDHA13-202ENST00000409494 FAM189BP81408 668 aa16.37■□□□□ 0.21
PCDHA13-202ENST00000409494 DCST1Q5T197 706 aa16.37■□□□□ 0.21
PCDHA13-202ENST00000409494 MSANTD3Q96H12 275 aa16.37■□□□□ 0.21
PCDHA13-202ENST00000409494 FAM120CQ9NX05 1096 aaKnown RBP16.37■□□□□ 0.21
PCDHA13-202ENST00000409494 SLC2A6Q9UGQ3 507 aa16.37■□□□□ 0.21
PCDHA13-202ENST00000409494 WBP11Q9Y2W2 641 aaKnown RBP16.37■□□□□ 0.21
PCDHA13-202ENST00000409494 CACNA1SQ13698 1873 aa16.37■□□□□ 0.21
PCDHA13-202ENST00000409494 TFPIP10646 304 aa16.37■□□□□ 0.21
PCDHA13-202ENST00000409494 CSTF2P33240 577 aaKnown RBP eCLIP16.37■□□□□ 0.21
PCDHA13-202ENST00000409494 CDK9P50750 372 aaKnown RBP16.37■□□□□ 0.21
PCDHA13-202ENST00000409494 HKDC1Q2TB90 917 aa16.37■□□□□ 0.21
PCDHA13-202ENST00000409494 PUS10Q3MIT2 529 aaKnown RBP16.37■□□□□ 0.21
PCDHA13-202ENST00000409494 FAM174BQ3ZCQ3 159 aa16.37■□□□□ 0.21
PCDHA13-202ENST00000409494 TMEM145Q8NBT3 493 aa16.37■□□□□ 0.21
PCDHA13-202ENST00000409494 C19orf18Q8NEA5 215 aa16.37■□□□□ 0.21
PCDHA13-202ENST00000409494 LRRC3Q9BY71 257 aa16.37■□□□□ 0.21
PCDHA13-202ENST00000409494 CD244Q9BZW8 370 aa16.37■□□□□ 0.21
PCDHA13-202ENST00000409494 EQTNQ9NQ60 294 aa16.37■□□□□ 0.21
PCDHA13-202ENST00000409494 DRGXA6NNA5 263 aa16.37■□□□□ 0.21
PCDHA13-202ENST00000409494 H3BNX3 289 aa16.37■□□□□ 0.21
PCDHA13-202ENST00000409494 RNGTTO60942 597 aaKnown RBP16.37■□□□□ 0.21
PCDHA13-202ENST00000409494 CSNK1DP48730 415 aa16.37■□□□□ 0.21
PCDHA13-202ENST00000409494 ALKAL1Q6UXT8 129 aa16.37■□□□□ 0.21
PCDHA13-202ENST00000409494 CAND1Q86VP6 1230 aaKnown RBP16.37■□□□□ 0.21
PCDHA13-202ENST00000409494 EEF1AKMT1Q8WVE0 214 aa16.37■□□□□ 0.21
PCDHA13-202ENST00000409494 SCRN2Q96FV2 425 aa16.37■□□□□ 0.21
PCDHA13-202ENST00000409494 C5orf34Q96MH7 638 aa16.37■□□□□ 0.21
PCDHA13-202ENST00000409494 TMLHEQ9NVH6 421 aa16.37■□□□□ 0.21
PCDHA13-202ENST00000409494 C2orf74A8MZ97 194 aa16.37■□□□□ 0.21
PCDHA13-202ENST00000409494 TYROBPO43914 113 aa16.37■□□□□ 0.21
PCDHA13-202ENST00000409494 TMCC2O75069 709 aa16.37■□□□□ 0.21
PCDHA13-202ENST00000409494 RFPL2O75678 378 aa16.37■□□□□ 0.21
PCDHA13-202ENST00000409494 ALOX5P09917 674 aa16.37■□□□□ 0.21
PCDHA13-202ENST00000409494 CST6Q15828 149 aa16.37■□□□□ 0.21
PCDHA13-202ENST00000409494 RAB41Q5JT25 222 aa16.37■□□□□ 0.21
PCDHA13-202ENST00000409494 AMER2Q8N7J2 671 aa16.37■□□□□ 0.21
PCDHA13-202ENST00000409494 MTERF1Q99551 399 aaKnown RBP16.37■□□□□ 0.21
PCDHA13-202ENST00000409494 AQP12BA6NM10 295 aa16.36■□□□□ 0.21
PCDHA13-202ENST00000409494 PTCHD3Q3KNS1 767 aa16.36■□□□□ 0.21
PCDHA13-202ENST00000409494 SPPL2CQ8IUH8 684 aa16.36■□□□□ 0.21
PCDHA13-202ENST00000409494 AQP12AQ8IXF9 295 aa16.36■□□□□ 0.21
PCDHA13-202ENST00000409494 ZNF527Q8NB42 609 aa16.36■□□□□ 0.21
PCDHA13-202ENST00000409494 KBTBD8Q8NFY9 601 aa16.36■□□□□ 0.21
PCDHA13-202ENST00000409494 PIGXQ8TBF5 258 aa16.36■□□□□ 0.21
PCDHA13-202ENST00000409494 MTERF3Q96E29 417 aa16.36■□□□□ 0.21
PCDHA13-202ENST00000409494 MAP10Q9P2G4 905 aa16.36■□□□□ 0.21
PCDHA13-202ENST00000409494 FAM25AB3EWG3 89 aa16.36■□□□□ 0.21
PCDHA13-202ENST00000409494 FAM25CB3EWG5 89 aa16.36■□□□□ 0.21
PCDHA13-202ENST00000409494 FAM25GB3EWG6 89 aa16.36■□□□□ 0.21
PCDHA13-202ENST00000409494 FOSL2P15408 326 aa16.36■□□□□ 0.21
PCDHA13-202ENST00000409494 CSNK2BP67870 215 aa16.36■□□□□ 0.21
PCDHA13-202ENST00000409494 RPA4Q13156 261 aa16.36■□□□□ 0.21
PCDHA13-202ENST00000409494 SPANXN2Q5MJ10 180 aa16.36■□□□□ 0.21
PCDHA13-202ENST00000409494 ARMC4Q5T2S8 1044 aa16.36■□□□□ 0.21
PCDHA13-202ENST00000409494 SCD5Q86SK9 330 aa16.36■□□□□ 0.21
PCDHA13-202ENST00000409494 ZMIZ2Q8NF64 920 aa16.36■□□□□ 0.21
PCDHA13-202ENST00000409494 LMX1AQ8TE12 382 aa16.36■□□□□ 0.21
PCDHA13-202ENST00000409494 KLF16Q9BXK1 252 aaPredicted RBP16.36■□□□□ 0.21
PCDHA13-202ENST00000409494 STRADBQ9C0K7 418 aa16.36■□□□□ 0.21
PCDHA13-202ENST00000409494 KCNN2Q9H2S1 579 aa16.36■□□□□ 0.21
PCDHA13-202ENST00000409494 TIMMDC1Q9NPL8 285 aa16.36■□□□□ 0.21
PCDHA13-202ENST00000409494 GMEB2Q9UKD1 530 aa16.36■□□□□ 0.21
PCDHA13-202ENST00000409494 SLC22A14Q9Y267 594 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms