RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 MYL9P24844 172 aa10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 HTR7P34969 479 aa10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 ARL2P36404 184 aa10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 LIPAP38571 399 aa10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 ARL4AP40617 200 aa10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 PXNP49023 591 aaPredicted RBP10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 KCNQ1P51787 676 aa10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 OR4D2P58180 307 aa10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 RGS1Q08116 209 aa10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 SLAMF1Q13291 335 aa10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 GPM6BQ13491 265 aa10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 CAMK1Q14012 370 aa10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 GBX1Q14549 363 aa10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 RPS6KA2Q15349 733 aa10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 TAB1Q15750 504 aa10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 ZNF667Q5HYK9 610 aa10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 CLLU1Q5K131 121 aa10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 SLC35F1Q5T1Q4 408 aa10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 OR6B2Q6IFH4 312 aa10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 NAPEPLDQ6IQ20 393 aa10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 SCYL2Q6P3W7 929 aa10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 BRAT1Q6PJG6 821 aa10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 ARSKQ6UWY0 536 aa10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 SLC24A5Q71RS6 500 aa10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 PDZD4Q76G19 769 aaPredicted RBP10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 SLC41A1Q8IVJ1 513 aa10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 RBFAQ8N0V3 343 aa10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 DTWD1Q8N5C7 304 aa10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 C1orf52Q8N6N3 182 aaKnown RBP10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 GDPD1Q8N9F7 314 aa10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 TP53I13Q8NBR0 393 aaPredicted RBP10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 C2CD4AQ8NCU7 369 aaPredicted RBP10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 ZNF540Q8NDQ6 660 aa10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 OR7D4Q8NG98 312 aa10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 C9orf43Q8TAL5 461 aaPredicted RBP10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 CHTF18Q8WVB6 975 aa10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 ASB15Q8WXK1 588 aa10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 MYDGFQ969H8 173 aa10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 ATXN7L3BQ96GX2 97 aa10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 C3orf30Q96M34 536 aa10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 FYTTD1Q96QD9 318 aaKnown RBP10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 CEP41Q9BYV8 373 aa10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 UCK2Q9BZX2 261 aa10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 SERHL2Q9H4I8 314 aa10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 ERVMER34-1Q9H9K5 563 aa10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 IL1RL2Q9HB29 575 aa10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 ZBTB20Q9HC78 741 aaPredicted RBP10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 FBRSL1Q9HCM7 1045 aaKnown RBP10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 IL1RAPQ9NPH3 570 aa10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 GPATCH2LQ9NWQ4 482 aa10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 NUFIP1Q9UHK0 495 aaKnown RBP10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 METRNQ9UJH8 293 aa10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 ZNF175Q9Y473 711 aa10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 IPPQ9Y573 584 aa10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 DNAJC15Q9Y5T4 150 aa10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 RNF215Q9Y6U7 377 aa10.37□□□□□ -0.75
NIF3L1-204ENST00000409357 ARPC4-TTLL3A0A0A6YYG9 625 aa10.36□□□□□ -0.75
NIF3L1-204ENST00000409357 B4DXG7 233 aa10.36□□□□□ -0.75
NIF3L1-204ENST00000409357 C5orf67F2Z3F1 127 aa10.36□□□□□ -0.75
NIF3L1-204ENST00000409357 M0QYV0 167 aa10.36□□□□□ -0.75
NIF3L1-204ENST00000409357 UBFD1O14562 309 aaKnown RBP10.36□□□□□ -0.75
NIF3L1-204ENST00000409357 AZIN1O14977 448 aa10.36□□□□□ -0.75
NIF3L1-204ENST00000409357 OGTO15294 1046 aa10.36□□□□□ -0.75
NIF3L1-204ENST00000409357 FZD6O60353 706 aa10.36□□□□□ -0.75
NIF3L1-204ENST00000409357 CACNG3O60359 315 aa10.36□□□□□ -0.75
NIF3L1-204ENST00000409357 HOXD4P09016 255 aaPredicted RBP10.36□□□□□ -0.75
NIF3L1-204ENST00000409357 BDNFP23560 247 aa10.36□□□□□ -0.75
NIF3L1-204ENST00000409357 TNFSF8P32971 234 aa10.36□□□□□ -0.75
NIF3L1-204ENST00000409357 NOS2P35228 1153 aa10.36□□□□□ -0.75
NIF3L1-204ENST00000409357 PBX3P40426 434 aa10.36□□□□□ -0.75
NIF3L1-204ENST00000409357 CLCN5P51795 746 aa10.36□□□□□ -0.75
NIF3L1-204ENST00000409357 TAS2R39P59534 338 aa10.36□□□□□ -0.75
NIF3L1-204ENST00000409357 HERVK_113P63132 956 aa10.36□□□□□ -0.75
NIF3L1-204ENST00000409357 FAM189BP81408 668 aa10.36□□□□□ -0.75
NIF3L1-204ENST00000409357 ZNF33AQ06730 810 aa10.36□□□□□ -0.75
NIF3L1-204ENST00000409357 LAMTOR4Q0VGL1 99 aa10.36□□□□□ -0.75
NIF3L1-204ENST00000409357 CDH17Q12864 832 aa10.36□□□□□ -0.75
NIF3L1-204ENST00000409357 HYAL2Q12891 473 aa10.36□□□□□ -0.75
NIF3L1-204ENST00000409357 GALEQ14376 348 aa10.36□□□□□ -0.75
NIF3L1-204ENST00000409357 EIF4HQ15056 248 aaKnown RBP10.36□□□□□ -0.75
NIF3L1-204ENST00000409357 UNC50Q53HI1 259 aa10.36□□□□□ -0.75
NIF3L1-204ENST00000409357 PCID2Q5JVF3 399 aa10.36□□□□□ -0.75
NIF3L1-204ENST00000409357 CLLU1OSQ5K130 101 aa10.36□□□□□ -0.75
NIF3L1-204ENST00000409357 CLVS2Q5SYC1 327 aa10.36□□□□□ -0.75
NIF3L1-204ENST00000409357 LAMTOR1Q6IAA8 161 aa10.36□□□□□ -0.75
NIF3L1-204ENST00000409357 PKN3Q6P5Z2 889 aa10.36□□□□□ -0.75
NIF3L1-204ENST00000409357 TMEM65Q6PI78 240 aa10.36□□□□□ -0.75
NIF3L1-204ENST00000409357 SNX20Q7Z614 316 aa10.36□□□□□ -0.75
NIF3L1-204ENST00000409357 RASGRP3Q8IV61 690 aa10.36□□□□□ -0.75
NIF3L1-204ENST00000409357 CEP97Q8IW35 865 aa10.36□□□□□ -0.75
NIF3L1-204ENST00000409357 DEPDC4Q8N2C3 294 aa10.36□□□□□ -0.75
NIF3L1-204ENST00000409357 DUSP18Q8NEJ0 188 aa10.36□□□□□ -0.75
NIF3L1-204ENST00000409357 OR4M2Q8NGB6 313 aa10.36□□□□□ -0.75
NIF3L1-204ENST00000409357 CNIH3Q8TBE1 160 aa10.36□□□□□ -0.75
NIF3L1-204ENST00000409357 DNAJB14Q8TBM8 379 aa10.36□□□□□ -0.75
NIF3L1-204ENST00000409357 RHBDF1Q96CC6 855 aa10.36□□□□□ -0.75
NIF3L1-204ENST00000409357 MRPL38Q96DV4 380 aaKnown RBP10.36□□□□□ -0.75
NIF3L1-204ENST00000409357 PPP1R2P1Q96PQ5 205 aa10.36□□□□□ -0.75
NIF3L1-204ENST00000409357 NEDD4LQ96PU5 975 aa10.36□□□□□ -0.75
NIF3L1-204ENST00000409357 KCTD15Q96SI1 283 aaPredicted RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms