RNA–Protein interactions for RNA: ENST00000409141.5

PDLIM2-206, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-206ENST00000409141 GRIA3P42263 894 aa17.25■□□□□ 0.35
PDLIM2-206ENST00000409141 GPX6P59796 221 aa17.25■□□□□ 0.35
PDLIM2-206ENST00000409141 FCRL6Q6DN72 434 aa17.25■□□□□ 0.35
PDLIM2-206ENST00000409141 CYS1Q717R9 158 aa17.25■□□□□ 0.35
PDLIM2-206ENST00000409141 OR2L3Q8NG85 312 aa17.25■□□□□ 0.35
PDLIM2-206ENST00000409141 ZNF480Q8WV37 535 aa17.25■□□□□ 0.35
PDLIM2-206ENST00000409141 SEC14L1Q92503 715 aa17.25■□□□□ 0.35
PDLIM2-206ENST00000409141 MR1Q95460 341 aa17.25■□□□□ 0.35
PDLIM2-206ENST00000409141 SPRTNQ9H040 489 aaPredicted RBP17.25■□□□□ 0.35
PDLIM2-206ENST00000409141 IRAK4Q9NWZ3 460 aa17.25■□□□□ 0.35
PDLIM2-206ENST00000409141 KCND3Q9UK17 655 aa17.25■□□□□ 0.35
PDLIM2-206ENST00000409141 ADAMTS6Q9UKP5 1117 aa17.25■□□□□ 0.35
PDLIM2-206ENST00000409141 MGAQ8IWI9 3026 aa17.25■□□□□ 0.35
PDLIM2-206ENST00000409141 FAM95CA0A1B0GW59 222 aa17.24■□□□□ 0.35
PDLIM2-206ENST00000409141 TCRBV9S1A1TA0A576 114 aa17.24■□□□□ 0.35
PDLIM2-206ENST00000409141 CXorf49A8MYA2 514 aaPredicted RBP17.24■□□□□ 0.35
PDLIM2-206ENST00000409141 TARM1B6A8C7 271 aa17.24■□□□□ 0.35
PDLIM2-206ENST00000409141 CMPK1P30085 196 aa17.24■□□□□ 0.35
PDLIM2-206ENST00000409141 GPS2Q13227 327 aa17.24■□□□□ 0.35
PDLIM2-206ENST00000409141 TAF1BQ53T94 588 aaPredicted RBP17.24■□□□□ 0.35
PDLIM2-206ENST00000409141 ZC3H12BQ5HYM0 836 aaKnown RBP17.24■□□□□ 0.35
PDLIM2-206ENST00000409141 MCATQ8IVS2 390 aaKnown RBP17.24■□□□□ 0.35
PDLIM2-206ENST00000409141 PPFIBP2Q8ND30 876 aa17.24■□□□□ 0.35
PDLIM2-206ENST00000409141 CT55Q8WUE5 264 aa17.24■□□□□ 0.35
PDLIM2-206ENST00000409141 DLG3Q92796 817 aa17.24■□□□□ 0.35
PDLIM2-206ENST00000409141 LRFN5Q96NI6 719 aa17.24■□□□□ 0.35
PDLIM2-206ENST00000409141 RHOJQ9H4E5 214 aa17.24■□□□□ 0.35
PDLIM2-206ENST00000409141 PARVBQ9HBI1 364 aa17.24■□□□□ 0.35
PDLIM2-206ENST00000409141 ZDHHC18Q9NUE0 388 aa17.24■□□□□ 0.35
PDLIM2-206ENST00000409141 ABCF3Q9NUQ8 709 aa17.24■□□□□ 0.35
PDLIM2-206ENST00000409141 EURLQ9NYK6 297 aa17.24■□□□□ 0.35
PDLIM2-206ENST00000409141 TXNDC16Q9P2K2 825 aa17.24■□□□□ 0.35
PDLIM2-206ENST00000409141 PDE10AQ9Y233 779 aa17.24■□□□□ 0.35
PDLIM2-206ENST00000409141 MRPS18BQ9Y676 258 aaKnown RBP17.24■□□□□ 0.35
PDLIM2-206ENST00000409141 AP1M2Q9Y6Q5 423 aa17.24■□□□□ 0.35
PDLIM2-206ENST00000409141 E7ENX8 843 aa17.24■□□□□ 0.35
PDLIM2-206ENST00000409141 ERVH48-1M5A8F1 160 aa17.24■□□□□ 0.35
PDLIM2-206ENST00000409141 MEN1O00255 615 aa17.24■□□□□ 0.35
PDLIM2-206ENST00000409141 SLC16A5O15375 505 aa17.24■□□□□ 0.35
PDLIM2-206ENST00000409141 NKX2-8O15522 239 aa17.24■□□□□ 0.35
PDLIM2-206ENST00000409141 TSPAN12O95859 305 aa17.24■□□□□ 0.35
PDLIM2-206ENST00000409141 CTSBP07858 339 aa17.24■□□□□ 0.35
PDLIM2-206ENST00000409141 HBQ1P09105 142 aa17.24■□□□□ 0.35
PDLIM2-206ENST00000409141 YBX1P67809 324 aaKnown RBP17.24■□□□□ 0.35
PDLIM2-206ENST00000409141 MC1RQ01726 317 aa17.24■□□□□ 0.35
PDLIM2-206ENST00000409141 TAP2Q03519 686 aa17.24■□□□□ 0.35
PDLIM2-206ENST00000409141 ILF2Q12905 390 aaKnown RBP17.24■□□□□ 0.35
PDLIM2-206ENST00000409141 SP140Q13342 867 aa17.24■□□□□ 0.35
PDLIM2-206ENST00000409141 DNASE1L3Q13609 305 aa17.24■□□□□ 0.35
PDLIM2-206ENST00000409141 GLE1Q53GS7 698 aaKnown RBP17.24■□□□□ 0.35
PDLIM2-206ENST00000409141 CTAGE3PQ8IX95 158 aa17.24■□□□□ 0.35
PDLIM2-206ENST00000409141 STARD8Q92502 1023 aa17.24■□□□□ 0.35
PDLIM2-206ENST00000409141 VPS39Q96JC1 886 aa17.24■□□□□ 0.35
PDLIM2-206ENST00000409141 CCDC138Q96M89 665 aa17.24■□□□□ 0.35
PDLIM2-206ENST00000409141 LRRC4CQ9HCJ2 640 aa17.24■□□□□ 0.35
PDLIM2-206ENST00000409141 PCMTD2Q9NV79 361 aa17.24■□□□□ 0.35
PDLIM2-206ENST00000409141 DMGDHQ9UI17 866 aaKnown RBP17.24■□□□□ 0.35
PDLIM2-206ENST00000409141 SNRNP200O75643 2136 aaKnown RBP17.23■□□□□ 0.35
PDLIM2-206ENST00000409141 PABPN1LA6NDY0 278 aaKnown RBP17.23■□□□□ 0.35
PDLIM2-206ENST00000409141 FAM159BA6NKW6 160 aa17.23■□□□□ 0.35
PDLIM2-206ENST00000409141 C21orf140B9A014 251 aa17.23■□□□□ 0.35
PDLIM2-206ENST00000409141 H3BMH7 237 aa17.23■□□□□ 0.35
PDLIM2-206ENST00000409141 TERTO14746 1132 aaKnown RBP17.23■□□□□ 0.35
PDLIM2-206ENST00000409141 ATXN7O15265 892 aaPredicted RBP17.23■□□□□ 0.35
PDLIM2-206ENST00000409141 HIST1H2AGP0C0S8 130 aaPredicted RBP17.23■□□□□ 0.35
PDLIM2-206ENST00000409141 PRKAR1AP10644 381 aa17.23■□□□□ 0.35
PDLIM2-206ENST00000409141 HIST1H2ADP20671 130 aa17.23■□□□□ 0.35
PDLIM2-206ENST00000409141 TAS2R39P59534 338 aa17.23■□□□□ 0.35
PDLIM2-206ENST00000409141 SOWAHCQ53LP3 525 aaPredicted RBP17.23■□□□□ 0.35
PDLIM2-206ENST00000409141 THEMIS2Q5TEJ8 643 aa17.23■□□□□ 0.35
PDLIM2-206ENST00000409141 C16orf46Q6P387 395 aa17.23■□□□□ 0.35
PDLIM2-206ENST00000409141 TLDC1Q6P9B6 456 aa17.23■□□□□ 0.35
PDLIM2-206ENST00000409141 DSELQ8IZU8 1212 aa17.23■□□□□ 0.35
PDLIM2-206ENST00000409141 ZNF655Q8N720 491 aaPredicted RBP17.23■□□□□ 0.35
PDLIM2-206ENST00000409141 CEP112Q8N8E3 955 aa17.23■□□□□ 0.35
PDLIM2-206ENST00000409141 IFT81Q8WYA0 676 aa17.23■□□□□ 0.35
PDLIM2-206ENST00000409141 TTC9Q92623 222 aa17.23■□□□□ 0.35
PDLIM2-206ENST00000409141 HIST1H2AHQ96KK5 128 aa17.23■□□□□ 0.35
PDLIM2-206ENST00000409141 BBC3Q96PG8 261 aaPredicted RBP17.23■□□□□ 0.35
PDLIM2-206ENST00000409141 CPNE1Q99829 537 aa17.23■□□□□ 0.35
PDLIM2-206ENST00000409141 HIST1H2AJQ99878 128 aa17.23■□□□□ 0.35
PDLIM2-206ENST00000409141 H2AFJQ9BTM1 129 aa17.23■□□□□ 0.35
PDLIM2-206ENST00000409141 DPH7Q9BTV6 452 aa17.23■□□□□ 0.35
PDLIM2-206ENST00000409141 CHST8Q9H2A9 424 aa17.23■□□□□ 0.35
PDLIM2-206ENST00000409141 MRPS30Q9NP92 439 aaKnown RBP17.23■□□□□ 0.35
PDLIM2-206ENST00000409141 TAC3Q9UHF0 121 aa17.23■□□□□ 0.35
PDLIM2-206ENST00000409141 MTO1Q9Y2Z2 717 aaKnown RBP17.23■□□□□ 0.35
PDLIM2-206ENST00000409141 KLK4Q9Y5K2 254 aa17.23■□□□□ 0.35
PDLIM2-206ENST00000409141 ZSCAN9O15535 394 aaPredicted RBP17.22■□□□□ 0.35
PDLIM2-206ENST00000409141 CCNDBP1O95273 360 aa17.22■□□□□ 0.35
PDLIM2-206ENST00000409141 ITGB2P05107 769 aa17.22■□□□□ 0.35
PDLIM2-206ENST00000409141 IMPA1P29218 277 aa17.22■□□□□ 0.35
PDLIM2-206ENST00000409141 RORAP35398 523 aa17.22■□□□□ 0.35
PDLIM2-206ENST00000409141 SLC12A2P55011 1212 aa17.22■□□□□ 0.35
PDLIM2-206ENST00000409141 RPS15P62841 145 aaKnown RBP17.22■□□□□ 0.35
PDLIM2-206ENST00000409141 PRDX1Q06830 199 aaKnown RBP17.22■□□□□ 0.35
PDLIM2-206ENST00000409141 NAA25Q14CX7 972 aa17.22■□□□□ 0.35
PDLIM2-206ENST00000409141 ICE2Q659A1 982 aa17.22■□□□□ 0.35
PDLIM2-206ENST00000409141 TMEM207Q6UWW9 146 aa17.22■□□□□ 0.35
PDLIM2-206ENST00000409141 ZNF517Q6ZMY9 492 aaPredicted RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms