RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 ZNF304Q9HCX3 659 aa12.34□□□□□ -0.43
SNORD88B-201ENST00000408454 MRPS30Q9NP92 439 aaKnown RBP12.34□□□□□ -0.43
SNORD88B-201ENST00000408454 P4HTMQ9NXG6 502 aa12.34□□□□□ -0.43
SNORD88B-201ENST00000408454 SPHK1Q9NYA1 384 aa12.34□□□□□ -0.43
SNORD88B-201ENST00000408454 MAP10Q9P2G4 905 aa12.34□□□□□ -0.43
SNORD88B-201ENST00000408454 CORO1CQ9ULV4 474 aaPredicted RBP12.34□□□□□ -0.43
SNORD88B-201ENST00000408454 CDYLQ9Y232 598 aa12.34□□□□□ -0.43
SNORD88B-201ENST00000408454 B3GNT3Q9Y2A9 372 aa12.34□□□□□ -0.43
SNORD88B-201ENST00000408454 PIEZO2Q9H5I5 2752 aa12.33□□□□□ -0.44
SNORD88B-201ENST00000408454 FITM1A5D6W6 292 aa12.33□□□□□ -0.44
SNORD88B-201ENST00000408454 MAP2K7O14733 419 aa12.33□□□□□ -0.44
SNORD88B-201ENST00000408454 AGFG2O95081 481 aa12.33□□□□□ -0.44
SNORD88B-201ENST00000408454 MATN4O95460 622 aa12.33□□□□□ -0.44
SNORD88B-201ENST00000408454 MPC1LP0DKB6 136 aa12.33□□□□□ -0.44
SNORD88B-201ENST00000408454 ITGA3P26006 1051 aa12.33□□□□□ -0.44
SNORD88B-201ENST00000408454 NMBRP28336 390 aa12.33□□□□□ -0.44
SNORD88B-201ENST00000408454 FMO4P31512 558 aa12.33□□□□□ -0.44
SNORD88B-201ENST00000408454 GRIA1P42261 906 aa12.33□□□□□ -0.44
SNORD88B-201ENST00000408454 PER3P56645 1201 aa12.33□□□□□ -0.44
SNORD88B-201ENST00000408454 SP140Q13342 867 aa12.33□□□□□ -0.44
SNORD88B-201ENST00000408454 DEFB110Q30KQ9 67 aa12.33□□□□□ -0.44
SNORD88B-201ENST00000408454 THEMIS2Q5TEJ8 643 aa12.33□□□□□ -0.44
SNORD88B-201ENST00000408454 C1orf189Q5VU69 101 aa12.33□□□□□ -0.44
SNORD88B-201ENST00000408454 JMJD6Q6NYC1 403 aaPredicted RBP12.33□□□□□ -0.44
SNORD88B-201ENST00000408454 MRPL14Q6P1L8 145 aaKnown RBP12.33□□□□□ -0.44
SNORD88B-201ENST00000408454 KIAA0408Q6ZU52 694 aa12.33□□□□□ -0.44
SNORD88B-201ENST00000408454 TRIM73Q86UV7 250 aa12.33□□□□□ -0.44
SNORD88B-201ENST00000408454 RASGEF1CQ8N431 466 aa12.33□□□□□ -0.44
SNORD88B-201ENST00000408454 FDCSPQ8NFU4 85 aa12.33□□□□□ -0.44
SNORD88B-201ENST00000408454 NAT14Q8WUY8 206 aa12.33□□□□□ -0.44
SNORD88B-201ENST00000408454 COL26A1Q96A83 441 aa12.33□□□□□ -0.44
SNORD88B-201ENST00000408454 ZNF669Q96BR6 464 aaPredicted RBP12.33□□□□□ -0.44
SNORD88B-201ENST00000408454 MIEF2Q96C03 454 aa12.33□□□□□ -0.44
SNORD88B-201ENST00000408454 THAP11Q96EK4 314 aa12.33□□□□□ -0.44
SNORD88B-201ENST00000408454 CABS1Q96KC9 395 aa12.33□□□□□ -0.44
SNORD88B-201ENST00000408454 PPM1MQ96MI6 270 aa12.33□□□□□ -0.44
SNORD88B-201ENST00000408454 ZNF778Q96MU6 729 aa12.33□□□□□ -0.44
SNORD88B-201ENST00000408454 FAM60AQ9NP50 221 aa12.33□□□□□ -0.44
SNORD88B-201ENST00000408454 SYBUQ9NX95 663 aa12.33□□□□□ -0.44
SNORD88B-201ENST00000408454 DHCR7Q9UBM7 475 aaKnown RBP12.33□□□□□ -0.44
SNORD88B-201ENST00000408454 TEKT2Q9UIF3 430 aa12.33□□□□□ -0.44
SNORD88B-201ENST00000408454 MAD1L1Q9Y6D9 718 aa12.33□□□□□ -0.44
SNORD88B-201ENST00000408454 HYKKA2RU49 373 aa12.32□□□□□ -0.44
SNORD88B-201ENST00000408454 PSIP1O75475 530 aaKnown RBP12.32□□□□□ -0.44
SNORD88B-201ENST00000408454 KLF7O75840 302 aaPredicted RBP12.32□□□□□ -0.44
SNORD88B-201ENST00000408454 C8GP07360 202 aa12.32□□□□□ -0.44
SNORD88B-201ENST00000408454 CAPN1P07384 714 aa12.32□□□□□ -0.44
SNORD88B-201ENST00000408454 ZSCAN5DPP0CG00 497 aa12.32□□□□□ -0.44
SNORD88B-201ENST00000408454 ETS1P14921 441 aa12.32□□□□□ -0.44
SNORD88B-201ENST00000408454 FBLP22087 321 aaKnown RBP12.32□□□□□ -0.44
SNORD88B-201ENST00000408454 AVPR1BP47901 424 aa12.32□□□□□ -0.44
SNORD88B-201ENST00000408454 KCNJ11Q14654 390 aa12.32□□□□□ -0.44
SNORD88B-201ENST00000408454 SIX1Q15475 284 aaPredicted RBP12.32□□□□□ -0.44
SNORD88B-201ENST00000408454 CYP1B1Q16678 543 aa12.32□□□□□ -0.44
SNORD88B-201ENST00000408454 CPZQ66K79 652 aa12.32□□□□□ -0.44
SNORD88B-201ENST00000408454 B3GNTL1Q67FW5 361 aaPredicted RBP12.32□□□□□ -0.44
SNORD88B-201ENST00000408454 RNF44Q7L0R7 432 aa12.32□□□□□ -0.44
SNORD88B-201ENST00000408454 TMEM135Q86UB9 458 aa12.32□□□□□ -0.44
SNORD88B-201ENST00000408454 KRT222Q8N1A0 295 aa12.32□□□□□ -0.44
SNORD88B-201ENST00000408454 LINC01555Q8NAE3 123 aa12.32□□□□□ -0.44
SNORD88B-201ENST00000408454 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.32□□□□□ -0.44
SNORD88B-201ENST00000408454 ACTRT1Q8TDG2 376 aa12.32□□□□□ -0.44
SNORD88B-201ENST00000408454 PPP4R1Q8TF05 950 aa12.32□□□□□ -0.44
SNORD88B-201ENST00000408454 ATL1Q8WXF7 558 aa12.32□□□□□ -0.44
SNORD88B-201ENST00000408454 INPP5DQ92835 1189 aa12.32□□□□□ -0.44
SNORD88B-201ENST00000408454 MFSD3Q96ES6 412 aa12.32□□□□□ -0.44
SNORD88B-201ENST00000408454 CRB3Q9BUF7 120 aa12.32□□□□□ -0.44
SNORD88B-201ENST00000408454 TRIM55Q9BYV6 548 aa12.32□□□□□ -0.44
SNORD88B-201ENST00000408454 SPRTNQ9H040 489 aaPredicted RBP12.32□□□□□ -0.44
SNORD88B-201ENST00000408454 MKKSQ9NPJ1 570 aaPredicted RBP12.32□□□□□ -0.44
SNORD88B-201ENST00000408454 TAS2R13Q9NYV9 303 aa12.32□□□□□ -0.44
SNORD88B-201ENST00000408454 MARCH4Q9P2E8 410 aaPredicted RBP12.32□□□□□ -0.44
SNORD88B-201ENST00000408454 C19orf25Q9UFG5 118 aaPredicted RBP12.32□□□□□ -0.44
SNORD88B-201ENST00000408454 ASIC3Q9UHC3 531 aa12.32□□□□□ -0.44
SNORD88B-201ENST00000408454 TRMT6Q9UJA5 497 aaKnown RBP12.32□□□□□ -0.44
SNORD88B-201ENST00000408454 PLAGL1Q9UM63 463 aa12.32□□□□□ -0.44
SNORD88B-201ENST00000408454 CRYL1Q9Y2S2 319 aa12.32□□□□□ -0.44
SNORD88B-201ENST00000408454 TLN1Q9Y490 2541 aaKnown RBP12.31□□□□□ -0.44
SNORD88B-201ENST00000408454 A6NL46 340 aa12.31□□□□□ -0.44
SNORD88B-201ENST00000408454 IQCF5A8MTL0 148 aa12.31□□□□□ -0.44
SNORD88B-201ENST00000408454 MYO1CO00159 1063 aa12.31□□□□□ -0.44
SNORD88B-201ENST00000408454 DNAJB5O75953 348 aa12.31□□□□□ -0.44
SNORD88B-201ENST00000408454 MLYCDO95822 493 aa12.31□□□□□ -0.44
SNORD88B-201ENST00000408454 GP1BBP13224 206 aa12.31□□□□□ -0.44
SNORD88B-201ENST00000408454 ACPPP15309 386 aa12.31□□□□□ -0.44
SNORD88B-201ENST00000408454 PGAM1P18669 254 aa12.31□□□□□ -0.44
SNORD88B-201ENST00000408454 HPDP32754 393 aaPredicted RBP12.31□□□□□ -0.44
SNORD88B-201ENST00000408454 COILP38432 576 aaPredicted RBP12.31□□□□□ -0.44
SNORD88B-201ENST00000408454 GRIA3P42263 894 aa12.31□□□□□ -0.44
SNORD88B-201ENST00000408454 GABRA4P48169 554 aa12.31□□□□□ -0.44
SNORD88B-201ENST00000408454 VPS41P49754 854 aa12.31□□□□□ -0.44
SNORD88B-201ENST00000408454 PNLIPRP1P54315 467 aa12.31□□□□□ -0.44
SNORD88B-201ENST00000408454 VSX2P58304 361 aaPredicted RBP12.31□□□□□ -0.44
SNORD88B-201ENST00000408454 CRADDP78560 199 aa12.31□□□□□ -0.44
SNORD88B-201ENST00000408454 PRDX1Q06830 199 aaKnown RBP12.31□□□□□ -0.44
SNORD88B-201ENST00000408454 TSTA3Q13630 321 aaPredicted RBP12.31□□□□□ -0.44
SNORD88B-201ENST00000408454 SEMA3AQ14563 771 aa12.31□□□□□ -0.44
SNORD88B-201ENST00000408454 KLHL38Q2WGJ6 581 aa12.31□□□□□ -0.44
SNORD88B-201ENST00000408454 WASHC2DQ5SRD0 308 aa12.31□□□□□ -0.44
SNORD88B-201ENST00000408454 PRAMEF13Q5VWM6 474 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms