RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 STK38LQ9Y2H1 464 aa19.8■□□□□ 0.76
CHKB-201ENST00000406938 LNP1A1A4G5 178 aa19.79■□□□□ 0.76
CHKB-201ENST00000406938 TMEM233B4DJY2 109 aa19.79■□□□□ 0.76
CHKB-201ENST00000406938 GIPC1O14908 333 aa19.79■□□□□ 0.76
CHKB-201ENST00000406938 PPM1DO15297 605 aa19.79■□□□□ 0.76
CHKB-201ENST00000406938 PSMB5P28074 263 aa19.79■□□□□ 0.76
CHKB-201ENST00000406938 BIRC2Q13490 618 aa19.79■□□□□ 0.76
CHKB-201ENST00000406938 FAM219BQ5XKK7 198 aa19.79■□□□□ 0.76
CHKB-201ENST00000406938 GPRIN3Q6ZVF9 776 aa19.79■□□□□ 0.76
CHKB-201ENST00000406938 SLC35F3Q8IY50 421 aa19.79■□□□□ 0.76
CHKB-201ENST00000406938 OR4C6Q8NH72 309 aa19.79■□□□□ 0.76
CHKB-201ENST00000406938 SH3KBP1Q96B97 665 aa19.79■□□□□ 0.76
CHKB-201ENST00000406938 MIPEPQ99797 713 aa19.79■□□□□ 0.76
CHKB-201ENST00000406938 DUSP23Q9BVJ7 150 aa19.79■□□□□ 0.76
CHKB-201ENST00000406938 ACAT2Q9BWD1 397 aa19.79■□□□□ 0.76
CHKB-201ENST00000406938 NSRP1Q9H0G5 558 aaKnown RBP19.79■□□□□ 0.76
CHKB-201ENST00000406938 PNPOQ9NVS9 261 aa19.79■□□□□ 0.76
CHKB-201ENST00000406938 TAC3Q9UHF0 121 aa19.79■□□□□ 0.76
CHKB-201ENST00000406938 SH2B3Q9UQQ2 575 aa19.79■□□□□ 0.76
CHKB-201ENST00000406938 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.79■□□□□ 0.76
CHKB-201ENST00000406938 E7EQ34 232 aa19.78■□□□□ 0.76
CHKB-201ENST00000406938 ESRRBO95718 433 aa19.78■□□□□ 0.76
CHKB-201ENST00000406938 CHRM5P08912 532 aaPredicted RBP19.78■□□□□ 0.76
CHKB-201ENST00000406938 ALPPL2P10696 532 aa19.78■□□□□ 0.76
CHKB-201ENST00000406938 NPPBP16860 134 aa19.78■□□□□ 0.76
CHKB-201ENST00000406938 RPL14P50914 215 aaKnown RBP19.78■□□□□ 0.76
CHKB-201ENST00000406938 ATXN3P54252 364 aaPredicted RBP19.78■□□□□ 0.76
CHKB-201ENST00000406938 PKNOX1P55347 436 aa19.78■□□□□ 0.76
CHKB-201ENST00000406938 ZCCHC8Q6NZY4 707 aaKnown RBP19.78■□□□□ 0.76
CHKB-201ENST00000406938 LETMD1Q6P1Q0 360 aa19.78■□□□□ 0.76
CHKB-201ENST00000406938 LCTLQ6UWM7 567 aa19.78■□□□□ 0.76
CHKB-201ENST00000406938 CPLX4Q7Z7G2 160 aa19.78■□□□□ 0.76
CHKB-201ENST00000406938 ADGRF3Q8IZF5 1079 aa19.78■□□□□ 0.76
CHKB-201ENST00000406938 OR4F6Q8NGB9 312 aa19.78■□□□□ 0.76
CHKB-201ENST00000406938 PIWIL2Q8TC59 973 aaKnown RBP19.78■□□□□ 0.76
CHKB-201ENST00000406938 ATOH1Q92858 354 aaPredicted RBP19.78■□□□□ 0.76
CHKB-201ENST00000406938 NEIL2Q969S2 332 aa19.78■□□□□ 0.76
CHKB-201ENST00000406938 SPHK1Q9NYA1 384 aa19.78■□□□□ 0.76
CHKB-201ENST00000406938 KCNE2Q9Y6J6 123 aa19.78■□□□□ 0.76
CHKB-201ENST00000406938 FAM221BA6H8Z2 402 aa19.77■□□□□ 0.76
CHKB-201ENST00000406938 BTN3A3O00478 584 aa19.77■□□□□ 0.76
CHKB-201ENST00000406938 TRIM38O00635 465 aa19.77■□□□□ 0.76
CHKB-201ENST00000406938 PCDHGA12O60330 932 aa19.77■□□□□ 0.76
CHKB-201ENST00000406938 OR4F21O95013 312 aa19.77■□□□□ 0.76
CHKB-201ENST00000406938 PEBP1P30086 187 aaKnown RBP19.77■□□□□ 0.76
CHKB-201ENST00000406938 ERVPABLB-1P60509 514 aa19.77■□□□□ 0.76
CHKB-201ENST00000406938 CLEC6AQ6EIG7 209 aa19.77■□□□□ 0.76
CHKB-201ENST00000406938 THOC1Q96FV9 657 aaKnown RBP19.77■□□□□ 0.76
CHKB-201ENST00000406938 KCNA7Q96RP8 456 aa19.77■□□□□ 0.76
CHKB-201ENST00000406938 HAUS8Q9BT25 410 aa19.77■□□□□ 0.76
CHKB-201ENST00000406938 NTMT1Q9BV86 223 aa19.77■□□□□ 0.76
CHKB-201ENST00000406938 TBC1D10AQ9BXI6 508 aa19.77■□□□□ 0.76
CHKB-201ENST00000406938 PCBD2Q9H0N5 130 aa19.77■□□□□ 0.76
CHKB-201ENST00000406938 ACTR8Q9H981 624 aa19.77■□□□□ 0.76
CHKB-201ENST00000406938 UCK1Q9HA47 277 aa19.77■□□□□ 0.76
CHKB-201ENST00000406938 NPHS2Q9NP85 383 aa19.77■□□□□ 0.76
CHKB-201ENST00000406938 FAM86C1Q9NVL1 165 aa19.77■□□□□ 0.76
CHKB-201ENST00000406938 GPRC5BQ9NZH0 403 aa19.77■□□□□ 0.76
CHKB-201ENST00000406938 FIS1Q9Y3D6 152 aa19.77■□□□□ 0.76
CHKB-201ENST00000406938 DYRK1BQ9Y463 629 aa19.77■□□□□ 0.76
CHKB-201ENST00000406938 OR6C74A6NCV1 312 aa19.76■□□□□ 0.75
CHKB-201ENST00000406938 PRAMEF4O60810 478 aa19.76■□□□□ 0.75
CHKB-201ENST00000406938 SLC34A2O95436 690 aa19.76■□□□□ 0.75
CHKB-201ENST00000406938 GNAZP19086 355 aa19.76■□□□□ 0.75
CHKB-201ENST00000406938 FOXA1P55317 472 aa19.76■□□□□ 0.75
CHKB-201ENST00000406938 PRAMEF9Q5VWM5 478 aa19.76■□□□□ 0.75
CHKB-201ENST00000406938 MILR1Q7Z6M3 343 aa19.76■□□□□ 0.75
CHKB-201ENST00000406938 OR10G6Q8NH81 332 aa19.76■□□□□ 0.75
CHKB-201ENST00000406938 SETD7Q8WTS6 366 aaKnown RBP19.76■□□□□ 0.75
CHKB-201ENST00000406938 CCT8L2Q96SF2 557 aa19.76■□□□□ 0.75
CHKB-201ENST00000406938 PSD3Q9NYI0 1048 aa19.76■□□□□ 0.75
CHKB-201ENST00000406938 RNF215Q9Y6U7 377 aa19.76■□□□□ 0.75
CHKB-201ENST00000406938 LILRA5A6NI73 299 aa19.76■□□□□ 0.75
CHKB-201ENST00000406938 CLGNO14967 610 aa19.76■□□□□ 0.75
CHKB-201ENST00000406938 PRICKLE3O43900 615 aaPredicted RBP19.76■□□□□ 0.75
CHKB-201ENST00000406938 TGDSO95455 350 aa19.76■□□□□ 0.75
CHKB-201ENST00000406938 FAM107AO95990 144 aa19.76■□□□□ 0.75
CHKB-201ENST00000406938 EBLN1P0CF75 366 aa19.76■□□□□ 0.75
CHKB-201ENST00000406938 YBX1P67809 324 aaKnown RBP19.76■□□□□ 0.75
CHKB-201ENST00000406938 SF3A3Q12874 501 aaKnown RBP eCLIP19.76■□□□□ 0.756e-7■■□□□ 13.8
CHKB-201ENST00000406938 CHIT1Q13231 466 aa19.76■□□□□ 0.75
CHKB-201ENST00000406938 SF3A2Q15428 464 aaKnown RBP19.76■□□□□ 0.75
CHKB-201ENST00000406938 KANK2Q63ZY3 851 aa19.76■□□□□ 0.75
CHKB-201ENST00000406938 TMPRSS11BQ86T26 416 aa19.76■□□□□ 0.75
CHKB-201ENST00000406938 MYLK4Q86YV6 388 aaPredicted RBP19.76■□□□□ 0.75
CHKB-201ENST00000406938 CDYL2Q8N8U2 506 aa19.76■□□□□ 0.75
CHKB-201ENST00000406938 OR2A1Q8NGT9 310 aa19.76■□□□□ 0.75
CHKB-201ENST00000406938 SLC5A11Q8WWX8 675 aa19.76■□□□□ 0.75
CHKB-201ENST00000406938 GRAMD1AQ96CP6 724 aa19.76■□□□□ 0.75
CHKB-201ENST00000406938 LDHAL6BQ9BYZ2 381 aaPredicted RBP19.76■□□□□ 0.75
CHKB-201ENST00000406938 TWSG1Q9GZX9 223 aa19.76■□□□□ 0.75
CHKB-201ENST00000406938 RNF11Q9Y3C5 154 aa19.76■□□□□ 0.75
CHKB-201ENST00000406938 TRAF6Q9Y4K3 522 aa19.76■□□□□ 0.75
CHKB-201ENST00000406938 PCDHB11Q9Y5F2 797 aa19.76■□□□□ 0.75
CHKB-201ENST00000406938 PIPSLA2A3N6 862 aa19.75■□□□□ 0.75
CHKB-201ENST00000406938 RHPN2P1A8MT19 583 aa19.75■□□□□ 0.75
CHKB-201ENST00000406938 AZIN1O14977 448 aa19.75■□□□□ 0.75
CHKB-201ENST00000406938 SIGLEC6O43699 453 aa19.75■□□□□ 0.75
CHKB-201ENST00000406938 NUDT21O43809 227 aaKnown RBP19.75■□□□□ 0.75
CHKB-201ENST00000406938 CRCPO75575 148 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms