RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 STOX2Q9P2F5 926 aaPredicted RBP8.09□□□□□ -1.11
GPC3-203ENST00000406757 COPG2Q9UBF2 871 aa8.09□□□□□ -1.11
GPC3-203ENST00000406757 CPNE7Q9UBL6 633 aa8.09□□□□□ -1.11
GPC3-203ENST00000406757 APC2O95996 2303 aa8.08□□□□□ -1.12
GPC3-203ENST00000406757 COL5A1P20908 1838 aaPredicted RBP8.08□□□□□ -1.12
GPC3-203ENST00000406757 ARHGEF17Q96PE2 2063 aaPredicted RBP8.08□□□□□ -1.12
GPC3-203ENST00000406757 PABPN1LA6NDY0 278 aaKnown RBP8.08□□□□□ -1.12
GPC3-203ENST00000406757 SYCE1LA8MT33 242 aa8.08□□□□□ -1.12
GPC3-203ENST00000406757 MYO1CO00159 1063 aa8.08□□□□□ -1.12
GPC3-203ENST00000406757 PPP6CO00743 305 aa8.08□□□□□ -1.12
GPC3-203ENST00000406757 SIGLEC6O43699 453 aa8.08□□□□□ -1.12
GPC3-203ENST00000406757 ITM2AO43736 263 aa8.08□□□□□ -1.12
GPC3-203ENST00000406757 CCNT2O60583 730 aaKnown RBP8.08□□□□□ -1.12
GPC3-203ENST00000406757 LYPLA1O75608 230 aaPredicted RBP8.08□□□□□ -1.12
GPC3-203ENST00000406757 SLC16A8O95907 504 aa8.08□□□□□ -1.12
GPC3-203ENST00000406757 ANXA5P08758 320 aa8.08□□□□□ -1.12
GPC3-203ENST00000406757 FGF3P11487 239 aaPredicted RBP8.08□□□□□ -1.12
GPC3-203ENST00000406757 TYRP1P17643 537 aa8.08□□□□□ -1.12
GPC3-203ENST00000406757 XRCC1P18887 633 aaPredicted RBP8.08□□□□□ -1.12
GPC3-203ENST00000406757 IMPA1P29218 277 aa8.08□□□□□ -1.12
GPC3-203ENST00000406757 EIF2S3P41091 472 aaKnown RBP8.08□□□□□ -1.12
GPC3-203ENST00000406757 PPM1FP49593 454 aaPredicted RBP8.08□□□□□ -1.12
GPC3-203ENST00000406757 NAGLUP54802 743 aa8.08□□□□□ -1.12
GPC3-203ENST00000406757 UBE2IP63279 158 aaKnown RBP8.08□□□□□ -1.12
GPC3-203ENST00000406757 HHEXQ03014 270 aa8.08□□□□□ -1.12
GPC3-203ENST00000406757 SF3A3Q12874 501 aaKnown RBP eCLIP8.08□□□□□ -1.125e-9■■■□□ 18.5
GPC3-203ENST00000406757 SP140Q13342 867 aa8.08□□□□□ -1.12
GPC3-203ENST00000406757 BIRC2Q13490 618 aa8.08□□□□□ -1.12
GPC3-203ENST00000406757 PLCL1Q15111 1095 aa8.08□□□□□ -1.12
GPC3-203ENST00000406757 UNC50Q53HI1 259 aa8.08□□□□□ -1.12
GPC3-203ENST00000406757 OGFOD3Q6PK18 319 aa8.08□□□□□ -1.12
GPC3-203ENST00000406757 AGTRAPQ6RW13 159 aa8.08□□□□□ -1.12
GPC3-203ENST00000406757 ATG14Q6ZNE5 492 aa8.08□□□□□ -1.12
GPC3-203ENST00000406757 LRRC69Q6ZNQ3 347 aa8.08□□□□□ -1.12
GPC3-203ENST00000406757 SLC9B2Q86UD5 537 aa8.08□□□□□ -1.12
GPC3-203ENST00000406757 LCA5Q86VQ0 697 aa8.08□□□□□ -1.12
GPC3-203ENST00000406757 DCUN1D3Q8IWE4 304 aa8.08□□□□□ -1.12
GPC3-203ENST00000406757 PARP9Q8IXQ6 854 aa8.08□□□□□ -1.12
GPC3-203ENST00000406757 SLC35F3Q8IY50 421 aa8.08□□□□□ -1.12
GPC3-203ENST00000406757 SYTL1Q8IYJ3 562 aa8.08□□□□□ -1.12
GPC3-203ENST00000406757 Q8N9G6 341 aaPredicted RBP8.08□□□□□ -1.12
GPC3-203ENST00000406757 OR10G6Q8NH81 332 aa8.08□□□□□ -1.12
GPC3-203ENST00000406757 PPP1R14CQ8TAE6 165 aa8.08□□□□□ -1.12
GPC3-203ENST00000406757 ZNF480Q8WV37 535 aa8.08□□□□□ -1.12
GPC3-203ENST00000406757 LCN9Q8WX39 176 aa8.08□□□□□ -1.12
GPC3-203ENST00000406757 RAD51AP1Q96B01 352 aa8.08□□□□□ -1.12
GPC3-203ENST00000406757 PRR11Q96HE9 360 aaPredicted RBP8.08□□□□□ -1.12
GPC3-203ENST00000406757 CCDC138Q96M89 665 aa8.08□□□□□ -1.12
GPC3-203ENST00000406757 TMEM237Q96Q45 408 aa8.08□□□□□ -1.12
GPC3-203ENST00000406757 ACAT2Q9BWD1 397 aa8.08□□□□□ -1.12
GPC3-203ENST00000406757 GATA5Q9BWX5 397 aaPredicted RBP8.08□□□□□ -1.12
GPC3-203ENST00000406757 PITPNM3Q9BZ71 974 aa8.08□□□□□ -1.12
GPC3-203ENST00000406757 PRORYQ9H606 182 aa8.08□□□□□ -1.12
GPC3-203ENST00000406757 MVB12BQ9H7P6 319 aa8.08□□□□□ -1.12
GPC3-203ENST00000406757 CNOT10Q9H9A5 744 aaKnown RBP8.08□□□□□ -1.12
GPC3-203ENST00000406757 RDH14Q9HBH5 336 aa8.08□□□□□ -1.12
GPC3-203ENST00000406757 SLC40A1Q9NP59 571 aa8.08□□□□□ -1.12
GPC3-203ENST00000406757 OXSMQ9NWU1 459 aa8.08□□□□□ -1.12
GPC3-203ENST00000406757 SPHK1Q9NYA1 384 aa8.08□□□□□ -1.12
GPC3-203ENST00000406757 PTBP2Q9UKA9 531 aaKnown RBP8.08□□□□□ -1.12
GPC3-203ENST00000406757 ICKQ9UPZ9 632 aa8.08□□□□□ -1.12
GPC3-203ENST00000406757 CSNK1G3Q9Y6M4 447 aa8.08□□□□□ -1.12
GPC3-203ENST00000406757 RNF215Q9Y6U7 377 aa8.08□□□□□ -1.12
GPC3-203ENST00000406757 COLEC10Q9Y6Z7 277 aa8.08□□□□□ -1.12
GPC3-203ENST00000406757 GCN1Q92616 2671 aaKnown RBP8.08□□□□□ -1.12
GPC3-203ENST00000406757 KIR2DS5A0A0G2JLQ3 304 aa8.07□□□□□ -1.12
GPC3-203ENST00000406757 A0A0G2JNG1 304 aa8.07□□□□□ -1.12
GPC3-203ENST00000406757 CPED1A4D0V7 1026 aa8.07□□□□□ -1.12
GPC3-203ENST00000406757 OR6C74A6NCV1 312 aa8.07□□□□□ -1.12
GPC3-203ENST00000406757 OR5K4A6NMS3 321 aa8.07□□□□□ -1.12
GPC3-203ENST00000406757 RHPN2P1A8MT19 583 aa8.07□□□□□ -1.12
GPC3-203ENST00000406757 KIR2DS3K7RE56 304 aa8.07□□□□□ -1.12
GPC3-203ENST00000406757 BTN3A3O00478 584 aa8.07□□□□□ -1.12
GPC3-203ENST00000406757 YKT6O15498 198 aa8.07□□□□□ -1.12
GPC3-203ENST00000406757 RRP8O43159 456 aaKnown RBP8.07□□□□□ -1.12
GPC3-203ENST00000406757 KLK8O60259 260 aa8.07□□□□□ -1.12
GPC3-203ENST00000406757 TRIM13O60858 407 aa8.07□□□□□ -1.12
GPC3-203ENST00000406757 C1QL1O75973 258 aa8.07□□□□□ -1.12
GPC3-203ENST00000406757 IPO13O94829 963 aaKnown RBP8.07□□□□□ -1.12
GPC3-203ENST00000406757 SUPT7LO94864 414 aa8.07□□□□□ -1.12
GPC3-203ENST00000406757 WDR47O94967 919 aa8.07□□□□□ -1.12
GPC3-203ENST00000406757 RPN2P04844 631 aa8.07□□□□□ -1.12
GPC3-203ENST00000406757 ENO2P09104 434 aaPredicted RBP8.07□□□□□ -1.12
GPC3-203ENST00000406757 CDK4P11802 303 aa8.07□□□□□ -1.12
GPC3-203ENST00000406757 CKMT2P17540 419 aa8.07□□□□□ -1.12
GPC3-203ENST00000406757 POLR2CP19387 275 aaPredicted RBP8.07□□□□□ -1.12
GPC3-203ENST00000406757 IMPDH1P20839 514 aa8.07□□□□□ -1.12
GPC3-203ENST00000406757 PSMB5P28074 263 aa8.07□□□□□ -1.12
GPC3-203ENST00000406757 PKLRP30613 574 aa8.07□□□□□ -1.12
GPC3-203ENST00000406757 ARRB2P32121 409 aa8.07□□□□□ -1.12
GPC3-203ENST00000406757 SLC18A1P54219 525 aa8.07□□□□□ -1.12
GPC3-203ENST00000406757 PNLIPRP1P54315 467 aa8.07□□□□□ -1.12
GPC3-203ENST00000406757 PRKAA2P54646 552 aa8.07□□□□□ -1.12
GPC3-203ENST00000406757 ALDH18A1P54886 795 aaKnown RBP8.07□□□□□ -1.12
GPC3-203ENST00000406757 OR1D5P58170 312 aa8.07□□□□□ -1.12
GPC3-203ENST00000406757 C19orf57Q0VDD7 668 aa8.07□□□□□ -1.12
GPC3-203ENST00000406757 KIR2DS5Q14953 304 aa8.07□□□□□ -1.12
GPC3-203ENST00000406757 RTP5Q14D33 572 aa8.07□□□□□ -1.12
GPC3-203ENST00000406757 SETDB1Q15047 1291 aa8.07□□□□□ -1.12
GPC3-203ENST00000406757 PTCHD3Q3KNS1 767 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms