RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 SERINC1Q9NRX5 453 aa4.51□□□□□ -1.69
HMGB3P18-201ENST00000406327 TMEM161AQ9NX61 479 aa4.51□□□□□ -1.69
HMGB3P18-201ENST00000406327 MOSPD1Q9UJG1 213 aa4.51□□□□□ -1.69
HMGB3P18-201ENST00000406327 ACAD8Q9UKU7 415 aa4.51□□□□□ -1.69
HMGB3P18-201ENST00000406327 DLGAP4Q9Y2H0 992 aa4.51□□□□□ -1.69
HMGB3P18-201ENST00000406327 PNPLA6Q8IY17 1366 aa4.51□□□□□ -1.69
HMGB3P18-201ENST00000406327 TNRQ92752 1358 aa4.51□□□□□ -1.69
HMGB3P18-201ENST00000406327 DLC1Q96QB1 1528 aa4.51□□□□□ -1.69
HMGB3P18-201ENST00000406327 MED14O60244 1454 aa4.5□□□□□ -1.69
HMGB3P18-201ENST00000406327 FAM135BQ49AJ0 1406 aa4.5□□□□□ -1.69
HMGB3P18-201ENST00000406327 A0A1W2PPW3 197 aa4.5□□□□□ -1.69
HMGB3P18-201ENST00000406327 MYMKA6NI61 221 aa4.5□□□□□ -1.69
HMGB3P18-201ENST00000406327 DUXAA6NLW8 204 aa4.5□□□□□ -1.69
HMGB3P18-201ENST00000406327 OAZ2O95190 189 aa4.5□□□□□ -1.69
HMGB3P18-201ENST00000406327 ACSL3O95573 720 aa4.5□□□□□ -1.69
HMGB3P18-201ENST00000406327 PMS2P2O95744 297 aa4.5□□□□□ -1.69
HMGB3P18-201ENST00000406327 PTMAP06454 111 aaKnown RBP4.5□□□□□ -1.69
HMGB3P18-201ENST00000406327 EPORP19235 508 aa4.5□□□□□ -1.69
HMGB3P18-201ENST00000406327 ITIH1P19827 911 aa4.5□□□□□ -1.69
HMGB3P18-201ENST00000406327 MPZP25189 248 aa4.5□□□□□ -1.69
HMGB3P18-201ENST00000406327 AZGP1P25311 298 aaKnown RBP4.5□□□□□ -1.69
HMGB3P18-201ENST00000406327 TIA1P31483 386 aaKnown RBP eCLIP4.5□□□□□ -1.69
HMGB3P18-201ENST00000406327 FRKP42685 505 aaPredicted RBP4.5□□□□□ -1.69
HMGB3P18-201ENST00000406327 RGS7P49802 495 aa4.5□□□□□ -1.69
HMGB3P18-201ENST00000406327 KHKP50053 298 aa4.5□□□□□ -1.69
HMGB3P18-201ENST00000406327 MFAP3P55082 362 aa4.5□□□□□ -1.69
HMGB3P18-201ENST00000406327 BNC1Q01954 994 aa4.5□□□□□ -1.69
HMGB3P18-201ENST00000406327 AP1B1Q10567 949 aa4.5□□□□□ -1.69
HMGB3P18-201ENST00000406327 MFAP5Q13361 173 aa4.5□□□□□ -1.69
HMGB3P18-201ENST00000406327 NPTX1Q15818 432 aa4.5□□□□□ -1.69
HMGB3P18-201ENST00000406327 DUOXA1Q1HG43 343 aa4.5□□□□□ -1.69
HMGB3P18-201ENST00000406327 SYT14P1Q58G82 188 aa4.5□□□□□ -1.69
HMGB3P18-201ENST00000406327 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.5□□□□□ -1.69
HMGB3P18-201ENST00000406327 TMEM182Q6ZP80 229 aaPredicted RBP4.5□□□□□ -1.69
HMGB3P18-201ENST00000406327 ASB18Q6ZVZ8 466 aa4.5□□□□□ -1.69
HMGB3P18-201ENST00000406327 DGLUCYQ7Z3D6 616 aa4.5□□□□□ -1.69
HMGB3P18-201ENST00000406327 SIAH3Q8IW03 269 aa4.5□□□□□ -1.69
HMGB3P18-201ENST00000406327 CFAP206Q8IYR0 622 aa4.5□□□□□ -1.69
HMGB3P18-201ENST00000406327 FBXL14Q8N1E6 418 aa4.5□□□□□ -1.69
HMGB3P18-201ENST00000406327 ZNF114Q8NC26 417 aa4.5□□□□□ -1.69
HMGB3P18-201ENST00000406327 B4GALNT2Q8NHY0 566 aa4.5□□□□□ -1.69
HMGB3P18-201ENST00000406327 SLC26A7Q8TE54 656 aa4.5□□□□□ -1.69
HMGB3P18-201ENST00000406327 RNF128Q8TEB7 428 aa4.5□□□□□ -1.69
HMGB3P18-201ENST00000406327 UBLCP1Q8WVY7 318 aaPredicted RBP4.5□□□□□ -1.69
HMGB3P18-201ENST00000406327 NTPCRQ9BSD7 190 aaKnown RBP4.5□□□□□ -1.69
HMGB3P18-201ENST00000406327 PRRG4Q9BZD6 226 aa4.5□□□□□ -1.69
HMGB3P18-201ENST00000406327 MIS12Q9H081 205 aa4.5□□□□□ -1.69
HMGB3P18-201ENST00000406327 MINDY3Q9H8M7 445 aa4.5□□□□□ -1.69
HMGB3P18-201ENST00000406327 LMAN1LQ9HAT1 526 aa4.5□□□□□ -1.69
HMGB3P18-201ENST00000406327 ACKR4Q9NPB9 350 aa4.5□□□□□ -1.69
HMGB3P18-201ENST00000406327 OLFML3Q9NRN5 406 aa4.5□□□□□ -1.69
HMGB3P18-201ENST00000406327 TRPC4Q9UBN4 977 aa4.5□□□□□ -1.69
HMGB3P18-201ENST00000406327 POLKQ9UBT6 870 aa4.5□□□□□ -1.69
HMGB3P18-201ENST00000406327 FBXL5Q9UKA1 691 aa4.5□□□□□ -1.69
HMGB3P18-201ENST00000406327 POU2F3Q9UKI9 436 aa4.5□□□□□ -1.69
HMGB3P18-201ENST00000406327 RNF150Q9ULK6 438 aa4.5□□□□□ -1.69
HMGB3P18-201ENST00000406327 OR2W1Q9Y3N9 320 aa4.5□□□□□ -1.69
HMGB3P18-201ENST00000406327 PREX1Q8TCU6 1659 aa4.5□□□□□ -1.69
HMGB3P18-201ENST00000406327 QRICH2Q9H0J4 1663 aa4.5□□□□□ -1.69
HMGB3P18-201ENST00000406327 TMEM2Q9UHN6 1383 aa4.5□□□□□ -1.69
HMGB3P18-201ENST00000406327 USP32Q8NFA0 1604 aa4.5□□□□□ -1.69
HMGB3P18-201ENST00000406327 NLRP1Q9C000 1473 aa4.49□□□□□ -1.69
HMGB3P18-201ENST00000406327 IL16Q14005 1332 aa4.49□□□□□ -1.69
HMGB3P18-201ENST00000406327 PDS5AQ29RF7 1337 aaKnown RBP4.49□□□□□ -1.69
HMGB3P18-201ENST00000406327 CPSF1Q10570 1443 aaKnown RBP4.49□□□□□ -1.69
HMGB3P18-201ENST00000406327 A0A0G2JNG1 304 aa4.49□□□□□ -1.69
HMGB3P18-201ENST00000406327 A0A0G2JPF8 293 aa4.49□□□□□ -1.69
HMGB3P18-201ENST00000406327 A0A1W2PRV1 198 aa4.49□□□□□ -1.69
HMGB3P18-201ENST00000406327 HNRNPCL3B7ZW38 293 aa4.49□□□□□ -1.69
HMGB3P18-201ENST00000406327 KERAO60938 352 aa4.49□□□□□ -1.69
HMGB3P18-201ENST00000406327 CRCPO75575 148 aa4.49□□□□□ -1.69
HMGB3P18-201ENST00000406327 RPS6KA5O75582 802 aa4.49□□□□□ -1.69
HMGB3P18-201ENST00000406327 WDPCPO95876 746 aa4.49□□□□□ -1.69
HMGB3P18-201ENST00000406327 TFAP2AP05549 437 aa4.49□□□□□ -1.69
HMGB3P18-201ENST00000406327 LIPFP07098 398 aa4.49□□□□□ -1.69
HMGB3P18-201ENST00000406327 SNRNP70P08621 437 aaKnown RBP4.49□□□□□ -1.69
HMGB3P18-201ENST00000406327 KRT19P08727 400 aa4.49□□□□□ -1.69
HMGB3P18-201ENST00000406327 C8orf89P0DMQ9 161 aa4.49□□□□□ -1.69
HMGB3P18-201ENST00000406327 HNRNPCL4P0DMR1 293 aa4.49□□□□□ -1.69
HMGB3P18-201ENST00000406327 TGFB3P10600 412 aa4.49□□□□□ -1.69
HMGB3P18-201ENST00000406327 HAPLN1P10915 354 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P18-201ENST00000406327 FCGR1AP12314 374 aa4.49□□□□□ -1.69
HMGB3P18-201ENST00000406327 IRF2P14316 349 aa4.49□□□□□ -1.69
HMGB3P18-201ENST00000406327 ARRB2P32121 409 aa4.49□□□□□ -1.69
HMGB3P18-201ENST00000406327 PTGER4P35408 488 aa4.49□□□□□ -1.69
HMGB3P18-201ENST00000406327 UBASH3AP57075 661 aa4.49□□□□□ -1.69
HMGB3P18-201ENST00000406327 RIPK4P57078 832 aa4.49□□□□□ -1.69
HMGB3P18-201ENST00000406327 NANOS3P60323 173 aaKnown RBP4.49□□□□□ -1.69
HMGB3P18-201ENST00000406327 ISL1P61371 349 aa4.49□□□□□ -1.69
HMGB3P18-201ENST00000406327 TUBA1BP68363 451 aa4.49□□□□□ -1.69
HMGB3P18-201ENST00000406327 CX3CL1P78423 397 aa4.49□□□□□ -1.69
HMGB3P18-201ENST00000406327 MAT1AQ00266 395 aaKnown RBP4.49□□□□□ -1.69
HMGB3P18-201ENST00000406327 RUNX1T1Q06455 604 aa4.49□□□□□ -1.69
HMGB3P18-201ENST00000406327 ILF2Q12905 390 aaKnown RBP4.49□□□□□ -1.69
HMGB3P18-201ENST00000406327 DLG1Q12959 904 aa4.49□□□□□ -1.69
HMGB3P18-201ENST00000406327 RPA4Q13156 261 aa4.49□□□□□ -1.69
HMGB3P18-201ENST00000406327 KIR2DS5Q14953 304 aa4.49□□□□□ -1.69
HMGB3P18-201ENST00000406327 MCMDC2Q4G0Z9 681 aa4.49□□□□□ -1.69
HMGB3P18-201ENST00000406327 SETMARQ53H47 684 aaPredicted RBP4.49□□□□□ -1.69
HMGB3P18-201ENST00000406327 IRAK1BP1Q5VVH5 260 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms