RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 KRT6AP02538 564 aa3.59□□□□□ -1.83
RTN4-208ENST00000404909 KRT6BP04259 564 aa3.59□□□□□ -1.83
RTN4-208ENST00000404909 F3P13726 295 aa3.59□□□□□ -1.83
RTN4-208ENST00000404909 NPPBP16860 134 aa3.59□□□□□ -1.83
RTN4-208ENST00000404909 SLC19A1P41440 591 aa3.59□□□□□ -1.83
RTN4-208ENST00000404909 KRT6CP48668 564 aa3.59□□□□□ -1.83
RTN4-208ENST00000404909 PPM1FP49593 454 aaPredicted RBP3.59□□□□□ -1.83
RTN4-208ENST00000404909 RAB28P51157 221 aa3.59□□□□□ -1.83
RTN4-208ENST00000404909 AFF3P51826 1226 aaKnown RBP3.59□□□□□ -1.83
RTN4-208ENST00000404909 HMGCS1Q01581 520 aa3.59□□□□□ -1.83
RTN4-208ENST00000404909 DMTNQ08495 405 aa3.59□□□□□ -1.83
RTN4-208ENST00000404909 BIRC2Q13490 618 aa3.59□□□□□ -1.83
RTN4-208ENST00000404909 DOC2AQ14183 400 aa3.59□□□□□ -1.83
RTN4-208ENST00000404909 NR6A1Q15406 480 aa3.59□□□□□ -1.83
RTN4-208ENST00000404909 KIF19Q2TAC6 998 aa3.59□□□□□ -1.83
RTN4-208ENST00000404909 PRAMEF9Q5VWM5 478 aa3.59□□□□□ -1.83
RTN4-208ENST00000404909 PRAMEF13Q5VWM6 474 aa3.59□□□□□ -1.83
RTN4-208ENST00000404909 LYSMD4Q5XG99 296 aa3.59□□□□□ -1.83
RTN4-208ENST00000404909 EFL1Q7Z2Z2 1120 aaKnown RBP3.59□□□□□ -1.83
RTN4-208ENST00000404909 ADCK2Q7Z695 626 aa3.59□□□□□ -1.83
RTN4-208ENST00000404909 ZNF761Q86XN6 746 aaPredicted RBP3.59□□□□□ -1.83
RTN4-208ENST00000404909 TREML1Q86YW5 311 aa3.59□□□□□ -1.83
RTN4-208ENST00000404909 FAM20CQ8IXL6 584 aa3.59□□□□□ -1.83
RTN4-208ENST00000404909 RNF175Q8N4F7 328 aa3.59□□□□□ -1.83
RTN4-208ENST00000404909 POU5F2Q8N7G0 328 aa3.59□□□□□ -1.83
RTN4-208ENST00000404909 TMEM105Q8N8V8 129 aa3.59□□□□□ -1.83
RTN4-208ENST00000404909 FNDC5Q8NAU1 212 aa3.59□□□□□ -1.83
RTN4-208ENST00000404909 OR2T11Q8NH01 316 aa3.59□□□□□ -1.83
RTN4-208ENST00000404909 SELENOMQ8WWX9 145 aa3.59□□□□□ -1.83
RTN4-208ENST00000404909 LCN9Q8WX39 176 aa3.59□□□□□ -1.83
RTN4-208ENST00000404909 MTERF1Q99551 399 aaKnown RBP3.59□□□□□ -1.83
RTN4-208ENST00000404909 C1orf50Q9BV19 199 aa3.59□□□□□ -1.83
RTN4-208ENST00000404909 LRRC61Q9BV99 259 aa3.59□□□□□ -1.83
RTN4-208ENST00000404909 NUSAP1Q9BXS6 441 aaKnown RBP3.59□□□□□ -1.83
RTN4-208ENST00000404909 PCED1AQ9H1Q7 454 aa3.59□□□□□ -1.83
RTN4-208ENST00000404909 PFDN4Q9NQP4 134 aa3.59□□□□□ -1.83
RTN4-208ENST00000404909 ARL8BQ9NVJ2 186 aa3.59□□□□□ -1.83
RTN4-208ENST00000404909 ZNF624Q9P2J8 865 aaPredicted RBP3.59□□□□□ -1.83
RTN4-208ENST00000404909 POLG2Q9UHN1 485 aa3.59□□□□□ -1.83
RTN4-208ENST00000404909 EP300Q09472 2414 aaPredicted RBP3.59□□□□□ -1.84
RTN4-208ENST00000404909 THADAQ6YHU6 1953 aa3.59□□□□□ -1.84
RTN4-208ENST00000404909 A0A1B0GVT2 93 aa3.59□□□□□ -1.84
RTN4-208ENST00000404909 A0A1W2PR77 199 aa3.59□□□□□ -1.84
RTN4-208ENST00000404909 PRR19A6NJB7 356 aa3.59□□□□□ -1.84
RTN4-208ENST00000404909 MANBAO00462 879 aa3.59□□□□□ -1.84
RTN4-208ENST00000404909 WFS1O76024 890 aa3.59□□□□□ -1.84
RTN4-208ENST00000404909 PDYNP01213 254 aa3.59□□□□□ -1.84
RTN4-208ENST00000404909 VIPP01282 170 aa3.59□□□□□ -1.84
RTN4-208ENST00000404909 ESRRAP11474 423 aaPredicted RBP3.59□□□□□ -1.84
RTN4-208ENST00000404909 PCNAP12004 261 aa3.59□□□□□ -1.84
RTN4-208ENST00000404909 CDH1P12830 882 aa3.59□□□□□ -1.84
RTN4-208ENST00000404909 EZRP15311 586 aaKnown RBP3.59□□□□□ -1.84
RTN4-208ENST00000404909 CD22P20273 847 aa3.59□□□□□ -1.84
RTN4-208ENST00000404909 INHBCP55103 352 aa3.59□□□□□ -1.84
RTN4-208ENST00000404909 RPS6KA2Q15349 733 aa3.59□□□□□ -1.84
RTN4-208ENST00000404909 ATP6AP1LQ52LC2 224 aa3.59□□□□□ -1.84
RTN4-208ENST00000404909 ABRAXAS1Q6UWZ7 409 aa3.59□□□□□ -1.84
RTN4-208ENST00000404909 LARP4Q71RC2 724 aaKnown RBP eCLIP3.59□□□□□ -1.84
RTN4-208ENST00000404909 CEP68Q76N32 757 aa3.59□□□□□ -1.84
RTN4-208ENST00000404909 LONP2Q86WA8 852 aa3.59□□□□□ -1.84
RTN4-208ENST00000404909 DCP2Q8IU60 420 aaKnown RBP3.59□□□□□ -1.84
RTN4-208ENST00000404909 LINC01555Q8NAE3 123 aa3.59□□□□□ -1.84
RTN4-208ENST00000404909 OR10G6Q8NH81 332 aa3.59□□□□□ -1.84
RTN4-208ENST00000404909 GPBAR1Q8TDU6 330 aa3.59□□□□□ -1.84
RTN4-208ENST00000404909 ACTRT2Q8TDY3 377 aa3.59□□□□□ -1.84
RTN4-208ENST00000404909 SLC5A11Q8WWX8 675 aa3.59□□□□□ -1.84
RTN4-208ENST00000404909 SMPDL3AQ92484 453 aa3.59□□□□□ -1.84
RTN4-208ENST00000404909 MAELQ96JY0 434 aaKnown RBP3.59□□□□□ -1.84
RTN4-208ENST00000404909 MIPEPQ99797 713 aa3.59□□□□□ -1.84
RTN4-208ENST00000404909 DUSP15Q9H1R2 295 aaPredicted RBP3.59□□□□□ -1.84
RTN4-208ENST00000404909 MVB12BQ9H7P6 319 aa3.59□□□□□ -1.84
RTN4-208ENST00000404909 RIC8BQ9NVN3 520 aa3.59□□□□□ -1.84
RTN4-208ENST00000404909 SNX6Q9UNH7 406 aa3.59□□□□□ -1.84
RTN4-208ENST00000404909 HEBP2Q9Y5Z4 205 aa3.59□□□□□ -1.84
RTN4-208ENST00000404909 COPG1Q9Y678 874 aaKnown RBP3.59□□□□□ -1.84
RTN4-208ENST00000404909 CAPN7Q9Y6W3 813 aa3.59□□□□□ -1.84
RTN4-208ENST00000404909 ZNF839A8K0R7 811 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 C9JVG2 144 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 H7BY64 318 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 CSF2P04141 144 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 SLC2A4P14672 509 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 JUPP14923 745 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 CD1EP15812 388 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 LBPP18428 481 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 SCTRP47872 440 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 DIO3P55073 304 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 BNIP1Q12981 228 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 SLBPQ14493 270 aaKnown RBP eCLIP3.58□□□□□ -1.84
RTN4-208ENST00000404909 ARHGAP19Q14CB8 494 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 ELOCQ15369 112 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 SF1Q15637 639 aaKnown RBP3.58□□□□□ -1.84
RTN4-208ENST00000404909 LPAL2Q16609 132 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 AP5B1Q2VPB7 878 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 DEFB133Q30KQ1 61 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 METTL21CQ5VZV1 264 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 FRG2Q64ET8 278 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 ADNP2Q6IQ32 1131 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 IYDQ6PHW0 289 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 MAMSTRQ6ZN01 415 aa3.58□□□□□ -1.84
RTN4-208ENST00000404909 Q6ZSR9 355 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms