RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 PRKG2Q13237 762 aa24.82■■□□□ 1.56
CPNE1-205ENST00000401607 SNCBQ16143 134 aa24.82■■□□□ 1.56
CPNE1-205ENST00000401607 HABP4Q5JVS0 413 aaKnown RBP24.82■■□□□ 1.56
CPNE1-205ENST00000401607 SUSD1Q6UWL2 747 aa24.82■■□□□ 1.56
CPNE1-205ENST00000401607 SLCO4C1Q6ZQN7 724 aa24.82■■□□□ 1.56
CPNE1-205ENST00000401607 RETREG3Q86VR2 466 aa24.82■■□□□ 1.56
CPNE1-205ENST00000401607 ZFAND4Q86XD8 727 aa24.82■■□□□ 1.56
CPNE1-205ENST00000401607 WDR20Q8TBZ3 569 aa24.82■■□□□ 1.56
CPNE1-205ENST00000401607 OR1E3Q8WZA6 343 aa24.82■■□□□ 1.56
CPNE1-205ENST00000401607 PDXPQ96GD0 296 aa24.82■■□□□ 1.56
CPNE1-205ENST00000401607 INSM2Q96T92 566 aaPredicted RBP24.82■■□□□ 1.56
CPNE1-205ENST00000401607 ACTL8Q9H568 366 aa24.82■■□□□ 1.56
CPNE1-205ENST00000401607 PRPF19Q9UMS4 504 aaKnown RBP24.82■■□□□ 1.56
CPNE1-205ENST00000401607 BBIP1A8MTZ0 92 aa24.81■■□□□ 1.56
CPNE1-205ENST00000401607 SCAMP1O15126 338 aa24.81■■□□□ 1.56
CPNE1-205ENST00000401607 SLC22A3O75751 556 aa24.81■■□□□ 1.56
CPNE1-205ENST00000401607 IGHV4-34P06331 123 aa24.81■■□□□ 1.56
CPNE1-205ENST00000401607 VARSP26640 1264 aaKnown RBP24.81■■□□□ 1.56
CPNE1-205ENST00000401607 IL12AP29459 219 aa24.81■■□□□ 1.56
CPNE1-205ENST00000401607 HNF4AP41235 474 aa24.81■■□□□ 1.56
CPNE1-205ENST00000401607 CASP2P42575 452 aa24.81■■□□□ 1.56
CPNE1-205ENST00000401607 RCAN2Q14206 197 aa24.81■■□□□ 1.56
CPNE1-205ENST00000401607 VPS26BQ4G0F5 336 aa24.81■■□□□ 1.56
CPNE1-205ENST00000401607 CYP20A1Q6UW02 462 aa24.81■■□□□ 1.56
CPNE1-205ENST00000401607 ENPP7Q6UWV6 458 aa24.81■■□□□ 1.56
CPNE1-205ENST00000401607 NET1Q7Z628 596 aaPredicted RBP24.81■■□□□ 1.56
CPNE1-205ENST00000401607 DEFB123Q8N688 67 aa24.81■■□□□ 1.56
CPNE1-205ENST00000401607 PROKR1Q8TCW9 393 aa24.81■■□□□ 1.56
CPNE1-205ENST00000401607 NRTNQ99748 197 aa24.81■■□□□ 1.56
CPNE1-205ENST00000401607 MENTQ9BUN1 341 aa24.81■■□□□ 1.56
CPNE1-205ENST00000401607 TRIT1Q9H3H1 467 aaKnown RBP24.81■■□□□ 1.56
CPNE1-205ENST00000401607 CARS2Q9HA77 564 aaKnown RBP24.81■■□□□ 1.56
CPNE1-205ENST00000401607 CCDC177Q9NQR7 707 aaPredicted RBP24.81■■□□□ 1.56
CPNE1-205ENST00000401607 C1orf109Q9NX04 203 aa24.81■■□□□ 1.56
CPNE1-205ENST00000401607 H0YIV9 168 aa24.8■■□□□ 1.56
CPNE1-205ENST00000401607 ANKRD28O15084 1053 aa24.8■■□□□ 1.56
CPNE1-205ENST00000401607 RSL1D1O76021 490 aaKnown RBP24.8■■□□□ 1.56
CPNE1-205ENST00000401607 PRPH2P23942 346 aa24.8■■□□□ 1.56
CPNE1-205ENST00000401607 MTTPP55157 894 aa24.8■■□□□ 1.56
CPNE1-205ENST00000401607 TSTA3Q13630 321 aaPredicted RBP24.8■■□□□ 1.56
CPNE1-205ENST00000401607 UBXN2BQ14CS0 331 aa24.8■■□□□ 1.56
CPNE1-205ENST00000401607 KIAA0040Q15053 153 aa24.8■■□□□ 1.56
CPNE1-205ENST00000401607 BNC2Q6ZN30 1099 aaPredicted RBP24.8■■□□□ 1.56
CPNE1-205ENST00000401607 TMPRSS11BQ86T26 416 aa24.8■■□□□ 1.56
CPNE1-205ENST00000401607 TBC1D21Q8IYX1 336 aa24.8■■□□□ 1.56
CPNE1-205ENST00000401607 RNF175Q8N4F7 328 aa24.8■■□□□ 1.56
CPNE1-205ENST00000401607 TOE1Q96GM8 510 aaKnown RBP24.8■■□□□ 1.56
CPNE1-205ENST00000401607 C12orf66Q96MD2 445 aa24.8■■□□□ 1.56
CPNE1-205ENST00000401607 WDR92Q96MX6 357 aa24.8■■□□□ 1.56
CPNE1-205ENST00000401607 HHIPQ96QV1 700 aa24.8■■□□□ 1.56
CPNE1-205ENST00000401607 OR2M4Q96R27 311 aa24.8■■□□□ 1.56
CPNE1-205ENST00000401607 TMEM45AQ9NWC5 275 aa24.8■■□□□ 1.56
CPNE1-205ENST00000401607 ASIC5Q9NY37 505 aa24.8■■□□□ 1.56
CPNE1-205ENST00000401607 NPIPB8E9PQR5 432 aa24.8■■□□□ 1.56
CPNE1-205ENST00000401607 SEC22BO75396 215 aa24.8■■□□□ 1.56
CPNE1-205ENST00000401607 CIB2O75838 187 aa24.8■■□□□ 1.56
CPNE1-205ENST00000401607 AKT2P31751 481 aa24.8■■□□□ 1.56
CPNE1-205ENST00000401607 STARD6P59095 220 aa24.8■■□□□ 1.56
CPNE1-205ENST00000401607 MAD2L1Q13257 205 aaPredicted RBP24.8■■□□□ 1.56
CPNE1-205ENST00000401607 HACD2Q6Y1H2 254 aa24.8■■□□□ 1.56
CPNE1-205ENST00000401607 HPS6Q86YV9 775 aa24.8■■□□□ 1.56
CPNE1-205ENST00000401607 FBXW8Q8N3Y1 598 aa24.8■■□□□ 1.56
CPNE1-205ENST00000401607 TMEM145Q8NBT3 493 aa24.8■■□□□ 1.56
CPNE1-205ENST00000401607 TSTD1Q8NFU3 115 aa24.8■■□□□ 1.56
CPNE1-205ENST00000401607 TSPEARQ8WU66 669 aa24.8■■□□□ 1.56
CPNE1-205ENST00000401607 WDR34Q96EX3 536 aa24.8■■□□□ 1.56
CPNE1-205ENST00000401607 FOXQ1Q9C009 403 aa24.8■■□□□ 1.56
CPNE1-205ENST00000401607 PRDM6Q9NQX0 595 aa24.8■■□□□ 1.56
CPNE1-205ENST00000401607 WNT16Q9UBV4 365 aa24.8■■□□□ 1.56
CPNE1-205ENST00000401607 MRPS17Q9Y2R5 130 aaKnown RBP24.8■■□□□ 1.56
CPNE1-205ENST00000401607 DYRK1BQ9Y463 629 aa24.8■■□□□ 1.56
CPNE1-205ENST00000401607 PCDHGA7Q9Y5G6 932 aa24.8■■□□□ 1.56
CPNE1-205ENST00000401607 CFLARO15519 480 aa24.79■■□□□ 1.56
CPNE1-205ENST00000401607 APBB3O95704 486 aa24.79■■□□□ 1.56
CPNE1-205ENST00000401607 ZNF33BQ06732 778 aa24.79■■□□□ 1.56
CPNE1-205ENST00000401607 CLCA4Q14CN2 919 aa24.79■■□□□ 1.56
CPNE1-205ENST00000401607 CATSPEREQ5SY80 951 aa24.79■■□□□ 1.56
CPNE1-205ENST00000401607 KIAA0895LQ68EN5 471 aa24.79■■□□□ 1.56
CPNE1-205ENST00000401607 C8orf82Q6P1X6 216 aaPredicted RBP24.79■■□□□ 1.56
CPNE1-205ENST00000401607 RIPOR1Q6ZS17 1223 aa24.79■■□□□ 1.56
CPNE1-205ENST00000401607 SPDL1Q96EA4 605 aa24.79■■□□□ 1.56
CPNE1-205ENST00000401607 CDRT15Q96T59 188 aa24.79■■□□□ 1.56
CPNE1-205ENST00000401607 MAP10Q9P2G4 905 aa24.79■■□□□ 1.56
CPNE1-205ENST00000401607 PACSIN3Q9UKS6 424 aa24.79■■□□□ 1.56
CPNE1-205ENST00000401607 EIF3LQ9Y262 564 aaKnown RBP24.79■■□□□ 1.56
CPNE1-205ENST00000401607 NDUFAF1Q9Y375 327 aa24.79■■□□□ 1.56
CPNE1-205ENST00000401607 PI15O43692 258 aa24.78■■□□□ 1.56
CPNE1-205ENST00000401607 IDSP22304 550 aa24.78■■□□□ 1.56
CPNE1-205ENST00000401607 CCR5P51681 352 aa24.78■■□□□ 1.56
CPNE1-205ENST00000401607 PSME3P61289 254 aa24.78■■□□□ 1.56
CPNE1-205ENST00000401607 ARHGAP19Q14CB8 494 aa24.78■■□□□ 1.56
CPNE1-205ENST00000401607 CYP2A13Q16696 494 aa24.78■■□□□ 1.56
CPNE1-205ENST00000401607 TRMT5Q32P41 509 aaKnown RBP24.78■■□□□ 1.56
CPNE1-205ENST00000401607 GPR153Q6NV75 609 aa24.78■■□□□ 1.56
CPNE1-205ENST00000401607 ADHFE1Q8IWW8 467 aa24.78■■□□□ 1.56
CPNE1-205ENST00000401607 C2orf73Q8N5S3 287 aaPredicted RBP24.78■■□□□ 1.56
CPNE1-205ENST00000401607 WSB2Q9NYS7 404 aaPredicted RBP24.78■■□□□ 1.56
CPNE1-205ENST00000401607 SPATA7Q9P0W8 599 aa24.78■■□□□ 1.56
CPNE1-205ENST00000401607 PNMA8BQ9ULN7 279 aaPredicted RBP24.78■■□□□ 1.56
CPNE1-205ENST00000401607 HS3ST3A1Q9Y663 406 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms