RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 BMP8BP34820 402 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 FLT3LGP49771 235 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 TMEM62Q0P6H9 643 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 SERINC3Q13530 473 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 ITPRIPL2Q3MIP1 535 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 ALG10BQ5I7T1 473 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 MED27Q6P2C8 311 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 XKRXQ6PP77 449 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 ATG9AQ7Z3C6 839 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 BMP8AQ7Z5Y6 402 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 SAPCD2Q86UD0 394 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 CDH24Q86UP0 819 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 CMTM1Q8IZ96 169 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 CRYBG2Q8N1P7 616 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 BORCS7Q96B45 105 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 FGGYQ96C11 551 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 DEFB118Q96PH6 123 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 OR52B2Q96RD2 323 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 CDC6Q99741 560 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 HGH1Q9BTY7 390 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 ADAM7Q9H2U9 754 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 SIX4Q9UIU6 781 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 PCDHGA10Q9Y5H3 936 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 A0A1W2PPW3 197 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 TRIM43BA6NCK2 446 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 MAGEB17A8MXT2 336 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 B8ZZF3 427 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 GABRDO14764 452 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 PIP5K1BO14986 540 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 ZNF28P17035 718 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 MC4RP32245 332 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 TRIM23P36406 574 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 RFX3P48380 749 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 POLR2HP52434 150 aaKnown RBP2.67□□□□□ -1.98
CHD9-202ENST00000398510 ATXN1P54253 815 aaKnown RBP2.67□□□□□ -1.98
CHD9-202ENST00000398510 EPHA4P54764 986 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 PRKCZQ05513 592 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 PROSER3Q2NL68 480 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 TBCELQ5QJ74 424 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 CCNJQ5T5M9 372 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 ADNP2Q6IQ32 1131 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 SLC26A9Q7LBE3 791 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 NOXA1Q86UR1 476 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 SLC25A41Q8N5S1 370 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 FBXO30Q8TB52 745 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 RASGRP4Q8TDF6 673 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 TIMD4Q96H15 378 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 TMEM68Q96MH6 324 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 CATSPER2Q96P56 530 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 PAFAH2Q99487 392 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 RNPEPQ9H4A4 650 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 SEC61A2Q9H9S3 476 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 FADS3Q9Y5Q0 445 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 CEP290O15078 2479 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 VSTM2BA6NLU5 285 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 TRIM49D1C9J1S8 452 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 DNAJB5O75953 348 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 WNT11O96014 354 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 ITGB2P05107 769 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 S100A9P06702 114 aaKnown RBP2.67□□□□□ -1.98
CHD9-202ENST00000398510 UBCP0CG48 685 aaKnown RBP2.67□□□□□ -1.98
CHD9-202ENST00000398510 CCL5P13501 91 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 C6P13671 934 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 ATF6P18850 670 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 CDK2P24941 298 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 DCTP40126 519 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 EIF2DP41214 584 aaKnown RBP2.67□□□□□ -1.98
CHD9-202ENST00000398510 HNF4AP41235 474 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 DHPSP49366 369 aaPredicted RBP2.67□□□□□ -1.98
CHD9-202ENST00000398510 GTF2BQ00403 316 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 IL10RBQ08334 325 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 FASTKQ14296 549 aaKnown RBP2.67□□□□□ -1.98
CHD9-202ENST00000398510 CDK10Q15131 360 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 TRIP13Q15645 432 aaPredicted RBP2.67□□□□□ -1.98
CHD9-202ENST00000398510 LRRC36Q1X8D7 754 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 ZNF829Q3KNS6 432 aaPredicted RBP2.67□□□□□ -1.98
CHD9-202ENST00000398510 GXYLT1Q4G148 440 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 PLPP4Q5VZY2 271 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 DRICH1Q6PGQ1 229 aaPredicted RBP2.67□□□□□ -1.98
CHD9-202ENST00000398510 RSPO2Q6UXX9 243 aaPredicted RBP2.67□□□□□ -1.98
CHD9-202ENST00000398510 TPGS1Q6ZTW0 290 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 MSANTD1Q6ZTZ1 278 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 ARMC8Q8IUR7 673 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 FMR1NBQ8N0W7 255 aaPredicted RBP2.67□□□□□ -1.98
CHD9-202ENST00000398510 TMEM178AQ8NBL3 297 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 ZMIZ2Q8NF64 920 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 PCDH19Q8TAB3 1148 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 SGF29Q96ES7 293 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 CMTM7Q96FZ5 175 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 FN3KQ9H479 309 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 NSUN3Q9H649 340 aaKnown RBP2.67□□□□□ -1.98
CHD9-202ENST00000398510 METTL7AQ9H8H3 244 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 FBXO5Q9UKT4 447 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 RAB21Q9UL25 225 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 PRPF19Q9UMS4 504 aaKnown RBP2.67□□□□□ -1.98
CHD9-202ENST00000398510 RAP2CQ9Y3L5 183 aa2.67□□□□□ -1.98
CHD9-202ENST00000398510 H3BNC9 293 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 GPIP06744 558 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 PRKCIP41743 596 aa2.66□□□□□ -1.98
CHD9-202ENST00000398510 DGKGP49619 791 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms