RNA–Protein interactions for RNA: ENST00000398258.7

CD47-203, Transcript of CD47 molecule, humanhuman

TSL 3

Gene CD47, Length 469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-203ENST00000398258 RRS1Q15050 365 aaKnown RBP2.52□□□□□ -2.01
CD47-203ENST00000398258 ZRSR1Q15695 479 aaKnown RBP2.52□□□□□ -2.01
CD47-203ENST00000398258 CCDC6Q16204 474 aa2.52□□□□□ -2.01
CD47-203ENST00000398258 PTGISQ16647 500 aa2.52□□□□□ -2.01
CD47-203ENST00000398258 ITPRIPL2Q3MIP1 535 aa2.52□□□□□ -2.01
CD47-203ENST00000398258 ACCSLQ4AC99 568 aa2.52□□□□□ -2.01
CD47-203ENST00000398258 MCMDC2Q4G0Z9 681 aa2.52□□□□□ -2.01
CD47-203ENST00000398258 PDLIM3Q53GG5 364 aaPredicted RBP2.52□□□□□ -2.01
CD47-203ENST00000398258 NHSL2Q5HYW2 709 aa2.52□□□□□ -2.01
CD47-203ENST00000398258 TCTE1Q5JU00 501 aa2.52□□□□□ -2.01
CD47-203ENST00000398258 C9orf139Q6ZV77 190 aa2.52□□□□□ -2.01
CD47-203ENST00000398258 ANO5Q75V66 913 aa2.52□□□□□ -2.01
CD47-203ENST00000398258 SPATA21Q7Z572 469 aa2.52□□□□□ -2.01
CD47-203ENST00000398258 ARHGAP22Q7Z5H3 698 aa2.52□□□□□ -2.01
CD47-203ENST00000398258 SMIM29Q86T20 159 aa2.52□□□□□ -2.01
CD47-203ENST00000398258 FAM219AQ8IW50 185 aa2.52□□□□□ -2.01
CD47-203ENST00000398258 AMER3Q8N944 861 aa2.52□□□□□ -2.01
CD47-203ENST00000398258 RASGEF1AQ8N9B8 481 aa2.52□□□□□ -2.01
CD47-203ENST00000398258 VANGL1Q8TAA9 524 aaPredicted RBP2.52□□□□□ -2.01
CD47-203ENST00000398258 NSMAFQ92636 917 aa2.52□□□□□ -2.01
CD47-203ENST00000398258 CD101Q93033 1021 aa2.52□□□□□ -2.01
CD47-203ENST00000398258 P2RX5Q93086 422 aa2.52□□□□□ -2.01
CD47-203ENST00000398258 PTP4A1Q93096 173 aa2.52□□□□□ -2.01
CD47-203ENST00000398258 SNRNP40Q96DI7 357 aaKnown RBP2.52□□□□□ -2.01
CD47-203ENST00000398258 ST6GAL2Q96JF0 529 aa2.52□□□□□ -2.01
CD47-203ENST00000398258 CCDC114Q96M63 670 aa2.52□□□□□ -2.01
CD47-203ENST00000398258 FAM20AQ96MK3 541 aa2.52□□□□□ -2.01
CD47-203ENST00000398258 INPP4AQ96PE3 977 aaPredicted RBP2.52□□□□□ -2.01
CD47-203ENST00000398258 DNAI2Q9GZS0 605 aa2.52□□□□□ -2.01
CD47-203ENST00000398258 GSN-AS1Q9NRJ2 163 aa2.52□□□□□ -2.01
CD47-203ENST00000398258 SLC7A7Q9UM01 511 aa2.52□□□□□ -2.01
CD47-203ENST00000398258 WDR83OSQ9Y284 106 aa2.52□□□□□ -2.01
CD47-203ENST00000398258 GREB1LQ9C091 1923 aaPredicted RBP2.51□□□□□ -2.01
CD47-203ENST00000398258 A0A0U1RQK1 487 aa2.51□□□□□ -2.01
CD47-203ENST00000398258 LOC101059948A0A1B0GTJ6 334 aa2.51□□□□□ -2.01
CD47-203ENST00000398258 ZNF320A2RRD8 509 aa2.51□□□□□ -2.01
CD47-203ENST00000398258 A4D1N5 150 aa2.51□□□□□ -2.01
CD47-203ENST00000398258 SDR42E2A6NKP2 422 aa2.51□□□□□ -2.01
CD47-203ENST00000398258 H0YAE9 185 aa2.51□□□□□ -2.01
CD47-203ENST00000398258 C16orf97H3BN30 126 aa2.51□□□□□ -2.01
CD47-203ENST00000398258 ATP6V0E1O15342 81 aa2.51□□□□□ -2.01
CD47-203ENST00000398258 FCGR3BO75015 233 aa2.51□□□□□ -2.01
CD47-203ENST00000398258 MOCS3O95396 460 aa2.51□□□□□ -2.01
CD47-203ENST00000398258 TSHBP01222 138 aa2.51□□□□□ -2.01
CD47-203ENST00000398258 C9P02748 559 aa2.51□□□□□ -2.01
CD47-203ENST00000398258 FRMD6-AS1P0C7T7 363 aa2.51□□□□□ -2.01
CD47-203ENST00000398258 IGHV4-31P0DP07 118 aa2.51□□□□□ -2.01
CD47-203ENST00000398258 SPP1P10451 314 aa2.51□□□□□ -2.01
CD47-203ENST00000398258 CA6P23280 308 aa2.51□□□□□ -2.01
CD47-203ENST00000398258 MNDAP41218 407 aa2.51□□□□□ -2.01
CD47-203ENST00000398258 PRKCIP41743 596 aa2.51□□□□□ -2.01
CD47-203ENST00000398258 FMO5P49326 533 aa2.51□□□□□ -2.01
CD47-203ENST00000398258 VAMP7P51809 220 aa2.51□□□□□ -2.01
CD47-203ENST00000398258 PDX1P52945 283 aa2.51□□□□□ -2.01
CD47-203ENST00000398258 MAZP56270 477 aaKnown RBP2.51□□□□□ -2.01
CD47-203ENST00000398258 MTCP1P56278 107 aa2.51□□□□□ -2.01
CD47-203ENST00000398258 KLC1Q07866 573 aa2.51□□□□□ -2.01
CD47-203ENST00000398258 ZNF415Q09FC8 603 aa2.51□□□□□ -2.01
CD47-203ENST00000398258 VEZF1Q14119 521 aa2.51□□□□□ -2.01
CD47-203ENST00000398258 SLMAPQ14BN4 828 aa2.51□□□□□ -2.01
CD47-203ENST00000398258 MORF4L2Q15014 288 aa2.51□□□□□ -2.01
CD47-203ENST00000398258 TAZQ16635 292 aa2.51□□□□□ -2.01
CD47-203ENST00000398258 ANKRD20A4Q4UJ75 823 aa2.51□□□□□ -2.01
CD47-203ENST00000398258 LACTB2Q53H82 288 aaPredicted RBP2.51□□□□□ -2.01
CD47-203ENST00000398258 ANKRD20A8PQ5CZ79 823 aa2.51□□□□□ -2.01
CD47-203ENST00000398258 ZNF789Q5FWF6 425 aa2.51□□□□□ -2.01
CD47-203ENST00000398258 TECRLQ5HYJ1 363 aa2.51□□□□□ -2.01
CD47-203ENST00000398258 ANKRD20A2Q5SQ80 823 aa2.51□□□□□ -2.01
CD47-203ENST00000398258 LCE3EQ5T5B0 92 aa2.51□□□□□ -2.01
CD47-203ENST00000398258 ANKRD20A1Q5TYW2 823 aa2.51□□□□□ -2.01
CD47-203ENST00000398258 ANKRD20A3Q5VUR7 823 aa2.51□□□□□ -2.01
CD47-203ENST00000398258 CORO6Q6QEF8 472 aa2.51□□□□□ -2.01
CD47-203ENST00000398258 TMEM182Q6ZP80 229 aaPredicted RBP2.51□□□□□ -2.01
CD47-203ENST00000398258 OTOAQ7RTW8 1153 aa2.51□□□□□ -2.01
CD47-203ENST00000398258 TMEM139Q8IV31 216 aa2.51□□□□□ -2.01
CD47-203ENST00000398258 SIAH3Q8IW03 269 aa2.51□□□□□ -2.01
CD47-203ENST00000398258 C4orf19Q8IY42 314 aa2.51□□□□□ -2.01
CD47-203ENST00000398258 NDUFAF2Q8N183 169 aa2.51□□□□□ -2.01
CD47-203ENST00000398258 CIARTQ8N365 385 aaPredicted RBP2.51□□□□□ -2.01
CD47-203ENST00000398258 ANKRD13CQ8N6S4 541 aa2.51□□□□□ -2.01
CD47-203ENST00000398258 MAB21L3Q8N8X9 362 aa2.51□□□□□ -2.01
CD47-203ENST00000398258 NHLRC2Q8NBF2 726 aa2.51□□□□□ -2.01
CD47-203ENST00000398258 SLC24A4Q8NFF2 622 aa2.51□□□□□ -2.01
CD47-203ENST00000398258 OR7G3Q8NG95 312 aa2.51□□□□□ -2.01
CD47-203ENST00000398258 OR1J1Q8NGS3 322 aa2.51□□□□□ -2.01
CD47-203ENST00000398258 OR52N5Q8NH56 324 aa2.51□□□□□ -2.01
CD47-203ENST00000398258 PHLDA1Q8WV24 401 aaPredicted RBP2.51□□□□□ -2.01
CD47-203ENST00000398258 HEXDCQ8WVB3 486 aa2.51□□□□□ -2.01
CD47-203ENST00000398258 ST6GALNAC6Q969X2 333 aa2.51□□□□□ -2.01
CD47-203ENST00000398258 HES6Q96HZ4 224 aa2.51□□□□□ -2.01
CD47-203ENST00000398258 FAM71F1Q96KD3 344 aaPredicted RBP2.51□□□□□ -2.01
CD47-203ENST00000398258 NODALQ96S42 347 aa2.51□□□□□ -2.01
CD47-203ENST00000398258 PARK7Q99497 189 aaKnown RBP2.51□□□□□ -2.01
CD47-203ENST00000398258 TRMT61BQ9BVS5 477 aaKnown RBP2.51□□□□□ -2.01
CD47-203ENST00000398258 FUT8Q9BYC5 575 aa2.51□□□□□ -2.01
CD47-203ENST00000398258 SLC2A11Q9BYW1 496 aa2.51□□□□□ -2.01
CD47-203ENST00000398258 ZNF350Q9GZX5 532 aa2.51□□□□□ -2.01
CD47-203ENST00000398258 TFB2MQ9H5Q4 396 aaKnown RBP2.51□□□□□ -2.01
CD47-203ENST00000398258 TMEM206Q9H813 350 aa2.51□□□□□ -2.01
CD47-203ENST00000398258 A4GALTQ9NPC4 353 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms