RNA–Protein interactions for RNA: ENST00000397611.7

PTPRD-205, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 5 BASIC

Gene PTPRD, Length 8,242 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-205ENST00000397611 FABP3P05413 133 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 RB1P06400 928 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 SRPRAP08240 638 aaKnown RBP5.32□□□□□ -1.56
PTPRD-205ENST00000397611 ZNF806P0C7X5 589 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 HSD3B1P14060 373 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 CRHBPP24387 322 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 HSD3B2P26439 372 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 SDC2P34741 201 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 MAP2K4P45985 399 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 DEFA5Q01523 94 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 PTSQ03393 145 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 CNTN1Q12860 1018 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 FBXL22Q6P050 247 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 PLEKHG7Q6ZR37 379 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 RIMKLAQ8IXN7 391 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 IPCEF1Q8WWN9 437 aaPredicted RBP5.32□□□□□ -1.56
PTPRD-205ENST00000397611 PITX2Q99697 317 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 ADGRE3Q9BY15 652 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 OR2B2Q9GZK3 357 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 TIMM22Q9Y584 194 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 UBE2QL1A1L167 161 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 FABP12A6NFH5 140 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 C1RP00736 705 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 JUNDP17535 347 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 FPR1P21462 350 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 GNPDA1P46926 289 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 SLC10A7Q0GE19 358 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 WSCD2Q2TBF2 565 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 TRIM46Q7Z4K8 759 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 R3HCC1LQ7Z5L2 792 aaKnown RBP5.32□□□□□ -1.56
PTPRD-205ENST00000397611 IGFN1Q86VF2 1251 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 CMTR2Q8IYT2 770 aaKnown RBP5.32□□□□□ -1.56
PTPRD-205ENST00000397611 ZNF548Q8NEK5 533 aaPredicted RBP5.32□□□□□ -1.56
PTPRD-205ENST00000397611 TESCQ96BS2 214 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 LYSMD1Q96S90 227 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 RTP3Q9BQQ7 232 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 GABARAPL1Q9H0R8 117 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 MUC3BQ9H195 1237 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 CWH43Q9H720 699 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 FBRSL1Q9HCM7 1045 aaKnown RBP5.32□□□□□ -1.56
PTPRD-205ENST00000397611 SH3BP4Q9P0V3 963 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 RPS6KA6Q9UK32 745 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 HSPB11Q9Y547 144 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 CITO14578 2027 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 PIP5K1BO14986 540 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 HOXA2O43364 376 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 MSL3P1P0C860 447 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 ZNF286BP0CG31 522 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 ATF6P18850 670 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 GGT1P19440 569 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 AKAP5P24588 427 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 TIE1P35590 1138 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 SLC15A1P46059 708 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 MTPNP58546 118 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 KCNJ8Q15842 424 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 FBXO43Q4G163 708 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 FAM26DQ5JW98 314 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 ARTNQ5T4W7 220 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 GARNL3Q5VVW2 1013 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 LYPLAL1Q5VWZ2 237 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 FAM92BQ6ZTR7 304 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 ADCK2Q7Z695 626 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 OR9I1Q8NGQ6 314 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 BIRC7Q96CA5 298 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 NTMT1Q9BV86 223 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 ITPAQ9BY32 194 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 TMEM138Q9NPI0 162 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 MARCH2Q9P0N8 246 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 DHRS7Q9Y394 339 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 SCN1AP35498 2009 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 A0A0G2JPF8 293 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 HNRNPCL3B7ZW38 293 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 SOCS2O14508 198 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 SERPINB7O75635 380 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 ZNF865P0CJ78 1059 aaPredicted RBP5.32□□□□□ -1.56
PTPRD-205ENST00000397611 HNRNPCL4P0DMR1 293 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 BMP1P13497 986 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 CSNK1DP48730 415 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 PNLIPRP1P54315 467 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 OLR1P78380 273 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 CD47Q08722 323 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 SUZ12Q15022 739 aaKnown RBP5.32□□□□□ -1.56
PTPRD-205ENST00000397611 TIGD6Q17RP2 521 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 GPR158Q5T848 1215 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 SLX4IPQ5VYV7 408 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 Q6ZSR9 355 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 PIWIL3Q7Z3Z3 882 aaKnown RBP5.32□□□□□ -1.56
PTPRD-205ENST00000397611 HS6ST3Q8IZP7 471 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 BRI3BPQ8WY22 251 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 FUBP1Q96AE4 644 aaKnown RBP5.32□□□□□ -1.56
PTPRD-205ENST00000397611 MS4A4AQ96JQ5 239 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 PHOX2BQ99453 314 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 AMBNQ9NP70 447 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 PAK1IP1Q9NWT1 392 aaPredicted RBP5.32□□□□□ -1.56
PTPRD-205ENST00000397611 ST3GAL5Q9UNP4 418 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 ARPC4-TTLL3A0A0A6YYG9 625 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 A0A1B0GVM2 712 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 LRATO95237 230 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 EBLN1P0CF75 366 aa5.32□□□□□ -1.56
PTPRD-205ENST00000397611 IRF1P10914 325 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms