RNA–Protein interactions for RNA: ENST00000397406.5

TSPAN4-205, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,426 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-205ENST00000397406 ZDHHC1Q8WTX9 485 aa16.4■□□□□ 0.22
TSPAN4-205ENST00000397406 SHCBP1LQ9BZQ2 653 aa16.4■□□□□ 0.22
TSPAN4-205ENST00000397406 ILKAPQ9H0C8 392 aaPredicted RBP16.4■□□□□ 0.22
TSPAN4-205ENST00000397406 RABEP2Q9H5N1 569 aa16.4■□□□□ 0.22
TSPAN4-205ENST00000397406 TNFRSF12AQ9NP84 129 aa16.4■□□□□ 0.22
TSPAN4-205ENST00000397406 INTS7Q9NVH2 962 aaKnown RBP16.4■□□□□ 0.22
TSPAN4-205ENST00000397406 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.4■□□□□ 0.22
TSPAN4-205ENST00000397406 A0A1B0GTL3 188 aa16.39■□□□□ 0.21
TSPAN4-205ENST00000397406 E7ENX8 843 aa16.39■□□□□ 0.21
TSPAN4-205ENST00000397406 OR7A17O14581 309 aa16.39■□□□□ 0.21
TSPAN4-205ENST00000397406 MLYCDO95822 493 aa16.39■□□□□ 0.21
TSPAN4-205ENST00000397406 FAM107AO95990 144 aa16.39■□□□□ 0.21
TSPAN4-205ENST00000397406 EPORP19235 508 aa16.39■□□□□ 0.21
TSPAN4-205ENST00000397406 PKLRP30613 574 aa16.39■□□□□ 0.21
TSPAN4-205ENST00000397406 HSD17B2P37059 387 aa16.39■□□□□ 0.21
TSPAN4-205ENST00000397406 PIK3CGP48736 1102 aa16.39■□□□□ 0.21
TSPAN4-205ENST00000397406 TBPL1P62380 186 aa16.39■□□□□ 0.21
TSPAN4-205ENST00000397406 SH3BP2P78314 561 aa16.39■□□□□ 0.21
TSPAN4-205ENST00000397406 TAP2Q03519 686 aa16.39■□□□□ 0.21
TSPAN4-205ENST00000397406 BNIP3Q12983 259 aa16.39■□□□□ 0.21
TSPAN4-205ENST00000397406 PRKAA1Q13131 559 aa16.39■□□□□ 0.21
TSPAN4-205ENST00000397406 FASTKQ14296 549 aaKnown RBP16.39■□□□□ 0.21
TSPAN4-205ENST00000397406 ST3GAL2Q16842 350 aa16.39■□□□□ 0.21
TSPAN4-205ENST00000397406 CUZD1Q86UP6 607 aa16.39■□□□□ 0.21
TSPAN4-205ENST00000397406 SYTL1Q8IYJ3 562 aa16.39■□□□□ 0.21
TSPAN4-205ENST00000397406 SLC37A2Q8TED4 501 aa16.39■□□□□ 0.21
TSPAN4-205ENST00000397406 AGAP11Q8TF27 550 aa16.39■□□□□ 0.21
TSPAN4-205ENST00000397406 OR4K3Q96R72 315 aa16.39■□□□□ 0.21
TSPAN4-205ENST00000397406 CCT8L2Q96SF2 557 aa16.39■□□□□ 0.21
TSPAN4-205ENST00000397406 ZNF382Q96SR6 550 aa16.39■□□□□ 0.21
TSPAN4-205ENST00000397406 SGPP1Q9BX95 441 aa16.39■□□□□ 0.21
TSPAN4-205ENST00000397406 FAM107BQ9H098 131 aa16.39■□□□□ 0.21
TSPAN4-205ENST00000397406 NSRP1Q9H0G5 558 aaKnown RBP16.39■□□□□ 0.21
TSPAN4-205ENST00000397406 NOL11Q9H8H0 719 aaKnown RBP16.39■□□□□ 0.21
TSPAN4-205ENST00000397406 IPPKQ9H8X2 491 aa16.39■□□□□ 0.21
TSPAN4-205ENST00000397406 EML4Q9HC35 981 aaKnown RBP16.39■□□□□ 0.21
TSPAN4-205ENST00000397406 SLC40A1Q9NP59 571 aa16.39■□□□□ 0.21
TSPAN4-205ENST00000397406 POT1Q9NUX5 634 aa16.39■□□□□ 0.21
TSPAN4-205ENST00000397406 DNAJC11Q9NVH1 559 aa16.39■□□□□ 0.21
TSPAN4-205ENST00000397406 PNPOQ9NVS9 261 aa16.39■□□□□ 0.21
TSPAN4-205ENST00000397406 CPNE7Q9UBL6 633 aa16.39■□□□□ 0.21
TSPAN4-205ENST00000397406 ZDHHC2Q9UIJ5 367 aa16.39■□□□□ 0.21
TSPAN4-205ENST00000397406 LNPEPQ9UIQ6 1025 aa16.39■□□□□ 0.21
TSPAN4-205ENST00000397406 ZNF225Q9UK10 706 aa16.39■□□□□ 0.21
TSPAN4-205ENST00000397406 ICKQ9UPZ9 632 aa16.39■□□□□ 0.21
TSPAN4-205ENST00000397406 SLC22A14Q9Y267 594 aa16.39■□□□□ 0.21
TSPAN4-205ENST00000397406 CSNK1G3Q9Y6M4 447 aa16.39■□□□□ 0.21
TSPAN4-205ENST00000397406 B4DGG1 531 aa16.38■□□□□ 0.21
TSPAN4-205ENST00000397406 TGDSO95455 350 aa16.38■□□□□ 0.21
TSPAN4-205ENST00000397406 EPB42P16452 691 aa16.38■□□□□ 0.21
TSPAN4-205ENST00000397406 ARRB1P49407 418 aaPredicted RBP16.38■□□□□ 0.21
TSPAN4-205ENST00000397406 RAB28P51157 221 aa16.38■□□□□ 0.21
TSPAN4-205ENST00000397406 RBBP7Q16576 425 aa16.38■□□□□ 0.21
TSPAN4-205ENST00000397406 OGFOD3Q6PK18 319 aa16.38■□□□□ 0.21
TSPAN4-205ENST00000397406 KANSL1Q7Z3B3 1105 aa16.38■□□□□ 0.21
TSPAN4-205ENST00000397406 CPLX4Q7Z7G2 160 aa16.38■□□□□ 0.21
TSPAN4-205ENST00000397406 THOC6Q86W42 341 aaKnown RBP16.38■□□□□ 0.21
TSPAN4-205ENST00000397406 SLC25A45Q8N413 288 aa16.38■□□□□ 0.21
TSPAN4-205ENST00000397406 OR52B6Q8NGF0 335 aa16.38■□□□□ 0.21
TSPAN4-205ENST00000397406 HMGCLL1Q8TB92 370 aa16.38■□□□□ 0.21
TSPAN4-205ENST00000397406 PIWIL2Q8TC59 973 aaKnown RBP16.38■□□□□ 0.21
TSPAN4-205ENST00000397406 ZFPM2Q8WW38 1151 aa16.38■□□□□ 0.21
TSPAN4-205ENST00000397406 MED8Q96G25 268 aa16.38■□□□□ 0.21
TSPAN4-205ENST00000397406 RAB11FIP5Q9BXF6 653 aa16.38■□□□□ 0.21
TSPAN4-205ENST00000397406 MID1IP1Q9NPA3 183 aa16.38■□□□□ 0.21
TSPAN4-205ENST00000397406 DOLKQ9UPQ8 538 aa16.38■□□□□ 0.21
TSPAN4-205ENST00000397406 ANGPTL3Q9Y5C1 460 aa16.38■□□□□ 0.21
TSPAN4-205ENST00000397406 A0A1B0GTQ1 180 aa16.37■□□□□ 0.21
TSPAN4-205ENST00000397406 ZNF839A8K0R7 811 aa16.37■□□□□ 0.21
TSPAN4-205ENST00000397406 NOBOXO60393 691 aa16.37■□□□□ 0.21
TSPAN4-205ENST00000397406 SNRNP200O75643 2136 aaKnown RBP16.37■□□□□ 0.21
TSPAN4-205ENST00000397406 CER1O95813 267 aa16.37■□□□□ 0.21
TSPAN4-205ENST00000397406 CAPNS1P04632 268 aa16.37■□□□□ 0.21
TSPAN4-205ENST00000397406 ANXA6P08133 673 aa16.37■□□□□ 0.21
TSPAN4-205ENST00000397406 FTH1P19P0C7X4 201 aa16.37■□□□□ 0.21
TSPAN4-205ENST00000397406 GIMD1P0DJR0 217 aa16.37■□□□□ 0.21
TSPAN4-205ENST00000397406 PRDX3P30048 256 aaKnown RBP16.37■□□□□ 0.21
TSPAN4-205ENST00000397406 RPL14P50914 215 aaKnown RBP16.37■□□□□ 0.21
TSPAN4-205ENST00000397406 PKNOX1P55347 436 aa16.37■□□□□ 0.21
TSPAN4-205ENST00000397406 TRAF3Q13114 568 aa16.37■□□□□ 0.21
TSPAN4-205ENST00000397406 DEFB133Q30KQ1 61 aa16.37■□□□□ 0.21
TSPAN4-205ENST00000397406 CAPN13Q6MZZ7 669 aaPredicted RBP16.37■□□□□ 0.21
TSPAN4-205ENST00000397406 IL27RAQ6UWB1 636 aa16.37■□□□□ 0.21
TSPAN4-205ENST00000397406 UNQ6494/PRO21346Q6UXR6 183 aa16.37■□□□□ 0.21
TSPAN4-205ENST00000397406 GLRX5Q86SX6 157 aa16.37■□□□□ 0.21
TSPAN4-205ENST00000397406 SYVN1Q86TM6 617 aa16.37■□□□□ 0.21
TSPAN4-205ENST00000397406 C17orf82Q86X59 251 aaPredicted RBP16.37■□□□□ 0.21
TSPAN4-205ENST00000397406 TRIM48Q8IWZ4 208 aa16.37■□□□□ 0.21
TSPAN4-205ENST00000397406 RAB42Q8N4Z0 105 aa16.37■□□□□ 0.21
TSPAN4-205ENST00000397406 LINC01555Q8NAE3 123 aa16.37■□□□□ 0.21
TSPAN4-205ENST00000397406 OR2L8Q8NGY9 312 aa16.37■□□□□ 0.21
TSPAN4-205ENST00000397406 AGR3Q8TD06 166 aa16.37■□□□□ 0.21
TSPAN4-205ENST00000397406 GRAMD1AQ96CP6 724 aa16.37■□□□□ 0.21
TSPAN4-205ENST00000397406 XKR8Q9H6D3 395 aa16.37■□□□□ 0.21
TSPAN4-205ENST00000397406 CCDC177Q9NQR7 707 aaPredicted RBP16.37■□□□□ 0.21
TSPAN4-205ENST00000397406 MARCOQ9UEW3 520 aaPredicted RBP16.37■□□□□ 0.21
TSPAN4-205ENST00000397406 STK38LQ9Y2H1 464 aa16.37■□□□□ 0.21
TSPAN4-205ENST00000397406 PCDHGB2Q9Y5G2 931 aa16.37■□□□□ 0.21
TSPAN4-205ENST00000397406 ARID1BQ8NFD5 2236 aaPredicted RBP16.37■□□□□ 0.21
TSPAN4-205ENST00000397406 CABIN1Q9Y6J0 2220 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms