RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 GRHL3Q8TE85 626 aa8.4□□□□□ -1.06
CAPN3-208ENST00000397204 ELMO1Q92556 727 aa8.4□□□□□ -1.06
CAPN3-208ENST00000397204 MOCOSQ96EN8 888 aa8.4□□□□□ -1.06
CAPN3-208ENST00000397204 TTC1Q99614 292 aa8.4□□□□□ -1.06
CAPN3-208ENST00000397204 OSBPL8Q9BZF1 889 aa8.4□□□□□ -1.06
CAPN3-208ENST00000397204 LHPPQ9H008 270 aa8.4□□□□□ -1.06
CAPN3-208ENST00000397204 GOLPH3Q9H4A6 298 aa8.4□□□□□ -1.06
CAPN3-208ENST00000397204 EPS8L2Q9H6S3 715 aa8.4□□□□□ -1.06
CAPN3-208ENST00000397204 SEMA3GQ9NS98 782 aa8.4□□□□□ -1.06
CAPN3-208ENST00000397204 INTS7Q9NVH2 962 aaKnown RBP8.4□□□□□ -1.06
CAPN3-208ENST00000397204 CDC23Q9UJX2 597 aa8.4□□□□□ -1.06
CAPN3-208ENST00000397204 NXT1Q9UKK6 140 aaKnown RBP8.4□□□□□ -1.06
CAPN3-208ENST00000397204 PCDHA3Q9Y5H8 950 aa8.4□□□□□ -1.06
CAPN3-208ENST00000397204 HS3ST3B1Q9Y662 390 aa8.4□□□□□ -1.06
CAPN3-208ENST00000397204 DCHS2Q6V1P9 2916 aa8.4□□□□□ -1.07
CAPN3-208ENST00000397204 ZGRF1Q86YA3 2104 aa8.39□□□□□ -1.07
CAPN3-208ENST00000397204 PCSK5Q92824 1860 aa8.39□□□□□ -1.07
CAPN3-208ENST00000397204 CCDC78A2IDD5 438 aa8.39□□□□□ -1.07
CAPN3-208ENST00000397204 HEATR9A2RTY3 570 aa8.39□□□□□ -1.07
CAPN3-208ENST00000397204 MROH6A6NGR9 719 aa8.39□□□□□ -1.07
CAPN3-208ENST00000397204 VSTM2BA6NLU5 285 aa8.39□□□□□ -1.07
CAPN3-208ENST00000397204 TARM1B6A8C7 271 aa8.39□□□□□ -1.07
CAPN3-208ENST00000397204 AKR1B15C9JRZ8 316 aaPredicted RBP8.39□□□□□ -1.07
CAPN3-208ENST00000397204 SOCS6O14544 535 aa8.39□□□□□ -1.07
CAPN3-208ENST00000397204 DSCR3O14972 297 aa8.39□□□□□ -1.07
CAPN3-208ENST00000397204 SRPX2O60687 465 aaPredicted RBP8.39□□□□□ -1.07
CAPN3-208ENST00000397204 TJP3O95049 919 aa8.39□□□□□ -1.07
CAPN3-208ENST00000397204 FKBP9O95302 570 aa8.39□□□□□ -1.07
CAPN3-208ENST00000397204 RPN2P04844 631 aa8.39□□□□□ -1.07
CAPN3-208ENST00000397204 PRSS56P0CW18 603 aa8.39□□□□□ -1.07
CAPN3-208ENST00000397204 TPH1P17752 444 aa8.39□□□□□ -1.07
CAPN3-208ENST00000397204 CD9P21926 228 aa8.39□□□□□ -1.07
CAPN3-208ENST00000397204 CTNNA1P35221 906 aaKnown RBP8.39□□□□□ -1.07
CAPN3-208ENST00000397204 PTPN7P35236 360 aa8.39□□□□□ -1.07
CAPN3-208ENST00000397204 MAP2K3P46734 347 aa8.39□□□□□ -1.07
CAPN3-208ENST00000397204 MARCKSL1P49006 195 aa8.39□□□□□ -1.07
CAPN3-208ENST00000397204 RAB28P51157 221 aa8.39□□□□□ -1.07
CAPN3-208ENST00000397204 FOXL2P58012 376 aa8.39□□□□□ -1.07
CAPN3-208ENST00000397204 CDC16Q13042 620 aa8.39□□□□□ -1.07
CAPN3-208ENST00000397204 GRM7Q14831 915 aa8.39□□□□□ -1.07
CAPN3-208ENST00000397204 BRD3Q15059 726 aa8.39□□□□□ -1.07
CAPN3-208ENST00000397204 DNAJC21Q5F1R6 531 aaKnown RBP8.39□□□□□ -1.07
CAPN3-208ENST00000397204 KCTD11Q693B1 232 aa8.39□□□□□ -1.07
CAPN3-208ENST00000397204 FIGLAQ6QHK4 219 aa8.39□□□□□ -1.07
CAPN3-208ENST00000397204 ISLR2Q6UXK2 745 aa8.39□□□□□ -1.07
CAPN3-208ENST00000397204 PACS1Q6VY07 963 aa8.39□□□□□ -1.07
CAPN3-208ENST00000397204 OR11G2Q8NGC1 345 aa8.39□□□□□ -1.07
CAPN3-208ENST00000397204 KRT35Q92764 455 aa8.39□□□□□ -1.07
CAPN3-208ENST00000397204 RELTQ969Z4 430 aa8.39□□□□□ -1.07
CAPN3-208ENST00000397204 ZUFSPQ96AP4 578 aa8.39□□□□□ -1.07
CAPN3-208ENST00000397204 LRRC40Q9H9A6 602 aa8.39□□□□□ -1.07
CAPN3-208ENST00000397204 CSAG2Q9Y5P2 127 aa8.39□□□□□ -1.07
CAPN3-208ENST00000397204 PRSS21Q9Y6M0 314 aa8.39□□□□□ -1.07
CAPN3-208ENST00000397204 CELSR1Q9NYQ6 3014 aa8.39□□□□□ -1.07
CAPN3-208ENST00000397204 MYO7BQ6PIF6 2116 aa8.38□□□□□ -1.07
CAPN3-208ENST00000397204 PDZD2O15018 2839 aa8.38□□□□□ -1.07
CAPN3-208ENST00000397204 F8P00451 2351 aa8.38□□□□□ -1.07
CAPN3-208ENST00000397204 E2F3O00716 465 aa8.38□□□□□ -1.07
CAPN3-208ENST00000397204 PJA2O43164 708 aa8.38□□□□□ -1.07
CAPN3-208ENST00000397204 ZG16O60844 167 aa8.38□□□□□ -1.07
CAPN3-208ENST00000397204 JRKO75564 520 aa8.38□□□□□ -1.07
CAPN3-208ENST00000397204 BMP4P12644 408 aa8.38□□□□□ -1.07
CAPN3-208ENST00000397204 MAGP20916 626 aa8.38□□□□□ -1.07
CAPN3-208ENST00000397204 MSNP26038 577 aaKnown RBP8.38□□□□□ -1.07
CAPN3-208ENST00000397204 PEBP1P30086 187 aaKnown RBP8.38□□□□□ -1.07
CAPN3-208ENST00000397204 PPARGP37231 505 aaPredicted RBP8.38□□□□□ -1.07
CAPN3-208ENST00000397204 CARSP49589 748 aaKnown RBP8.38□□□□□ -1.07
CAPN3-208ENST00000397204 RWDD2BP57060 319 aa8.38□□□□□ -1.07
CAPN3-208ENST00000397204 MFAP5Q13361 173 aa8.38□□□□□ -1.07
CAPN3-208ENST00000397204 ART3Q13508 389 aa8.38□□□□□ -1.07
CAPN3-208ENST00000397204 NAA30Q147X3 362 aaPredicted RBP8.38□□□□□ -1.07
CAPN3-208ENST00000397204 SPA17Q15506 151 aa8.38□□□□□ -1.07
CAPN3-208ENST00000397204 SF1Q15637 639 aaKnown RBP8.38□□□□□ -1.07
CAPN3-208ENST00000397204 RBBP7Q16576 425 aa8.38□□□□□ -1.07
CAPN3-208ENST00000397204 TUBB8Q3ZCM7 444 aa8.38□□□□□ -1.07
CAPN3-208ENST00000397204 SYTL3Q4VX76 610 aa8.38□□□□□ -1.07
CAPN3-208ENST00000397204 TTC23LQ6PF05 361 aa8.38□□□□□ -1.07
CAPN3-208ENST00000397204 ARHGEF18Q6ZSZ5 1173 aa8.38□□□□□ -1.07
CAPN3-208ENST00000397204 LINC00523Q86TU6 105 aa8.38□□□□□ -1.07
CAPN3-208ENST00000397204 TMEM151BQ8IW70 566 aa8.38□□□□□ -1.07
CAPN3-208ENST00000397204 CCDC170Q8IYT3 715 aa8.38□□□□□ -1.07
CAPN3-208ENST00000397204 SLC22A15Q8IZD6 547 aa8.38□□□□□ -1.07
CAPN3-208ENST00000397204 BCORP1Q8N888 145 aa8.38□□□□□ -1.07
CAPN3-208ENST00000397204 LINC01555Q8NAE3 123 aa8.38□□□□□ -1.07
CAPN3-208ENST00000397204 ASZ1Q8WWH4 475 aa8.38□□□□□ -1.07
CAPN3-208ENST00000397204 THOC3Q96J01 351 aaKnown RBP8.38□□□□□ -1.07
CAPN3-208ENST00000397204 ZNF285Q96NJ3 590 aa8.38□□□□□ -1.07
CAPN3-208ENST00000397204 SLX1AQ9BQ83 275 aa8.38□□□□□ -1.07
CAPN3-208ENST00000397204 CARD6Q9BX69 1037 aa8.38□□□□□ -1.07
CAPN3-208ENST00000397204 CUTCQ9NTM9 273 aa8.38□□□□□ -1.07
CAPN3-208ENST00000397204 OLAHQ9NV23 265 aa8.38□□□□□ -1.07
CAPN3-208ENST00000397204 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.38□□□□□ -1.07
CAPN3-208ENST00000397204 COPG2Q9UBF2 871 aa8.38□□□□□ -1.07
CAPN3-208ENST00000397204 PLAGL1Q9UM63 463 aa8.38□□□□□ -1.07
CAPN3-208ENST00000397204 PCDHA13Q9Y5I0 950 aa8.38□□□□□ -1.07
CAPN3-208ENST00000397204 PKDREJQ9NTG1 2253 aa8.38□□□□□ -1.07
CAPN3-208ENST00000397204 HIVEP1P15822 2718 aa8.38□□□□□ -1.07
CAPN3-208ENST00000397204 CCDC88CQ9P219 2028 aa8.37□□□□□ -1.07
CAPN3-208ENST00000397204 DOCK10Q96BY6 2186 aa8.37□□□□□ -1.07
CAPN3-208ENST00000397204 ARHGAP10A1A4S6 786 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms