RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 FCF1Q9Y324 198 aaKnown RBP12.08□□□□□ -0.47
SMU1-201ENST00000397149 ZNF609O15014 1411 aa12.08□□□□□ -0.48
SMU1-201ENST00000397149 A0A1W2PPM1 405 aa12.08□□□□□ -0.48
SMU1-201ENST00000397149 A6NCN8 305 aa12.08□□□□□ -0.48
SMU1-201ENST00000397149 ZNF254O75437 659 aa12.08□□□□□ -0.48
SMU1-201ENST00000397149 XKP51811 444 aa12.08□□□□□ -0.48
SMU1-201ENST00000397149 LRRC32Q14392 662 aa12.08□□□□□ -0.48
SMU1-201ENST00000397149 HEPACAMQ14CZ8 416 aa12.08□□□□□ -0.48
SMU1-201ENST00000397149 CBR4Q8N4T8 237 aa12.08□□□□□ -0.48
SMU1-201ENST00000397149 AGBL3Q8NEM8 1001 aa12.08□□□□□ -0.48
SMU1-201ENST00000397149 DNERQ8NFT8 737 aa12.08□□□□□ -0.48
SMU1-201ENST00000397149 RIT1Q92963 219 aa12.08□□□□□ -0.48
SMU1-201ENST00000397149 ISCA1Q9BUE6 129 aa12.08□□□□□ -0.48
SMU1-201ENST00000397149 GIN1Q9NXP7 522 aa12.08□□□□□ -0.48
SMU1-201ENST00000397149 CALML5Q9NZT1 146 aa12.08□□□□□ -0.48
SMU1-201ENST00000397149 MYEF2Q9P2K5 600 aaKnown RBP12.08□□□□□ -0.48
SMU1-201ENST00000397149 ADAM18Q9Y3Q7 739 aa12.08□□□□□ -0.48
SMU1-201ENST00000397149 CDC7O00311 574 aa12.08□□□□□ -0.48
SMU1-201ENST00000397149 ABLIM1O14639 778 aa12.08□□□□□ -0.48
SMU1-201ENST00000397149 SMIM10L2AP0DMW4 78 aa12.08□□□□□ -0.48
SMU1-201ENST00000397149 SMIM10L2BP0DMW5 78 aa12.08□□□□□ -0.48
SMU1-201ENST00000397149 ETV5P41161 510 aa12.08□□□□□ -0.48
SMU1-201ENST00000397149 PLP2Q04941 152 aa12.08□□□□□ -0.48
SMU1-201ENST00000397149 DPYSL2Q16555 572 aa12.08□□□□□ -0.48
SMU1-201ENST00000397149 NTRK2Q16620 822 aa12.08□□□□□ -0.48
SMU1-201ENST00000397149 CHRFAM7AQ494W8 412 aa12.08□□□□□ -0.48
SMU1-201ENST00000397149 LINC00116Q8NCU8 138 aa12.08□□□□□ -0.48
SMU1-201ENST00000397149 BSCL2Q96G97 398 aaPredicted RBP12.08□□□□□ -0.48
SMU1-201ENST00000397149 UBXN10Q96LJ8 280 aa12.08□□□□□ -0.48
SMU1-201ENST00000397149 RAD9AQ99638 391 aa12.08□□□□□ -0.48
SMU1-201ENST00000397149 ICKQ9UPZ9 632 aa12.08□□□□□ -0.48
SMU1-201ENST00000397149 CFL2Q9Y281 166 aa12.08□□□□□ -0.48
SMU1-201ENST00000397149 GJB1P08034 283 aa12.08□□□□□ -0.48
SMU1-201ENST00000397149 MLLT10P55197 1068 aa12.08□□□□□ -0.48
SMU1-201ENST00000397149 SNTA1Q13424 505 aa12.08□□□□□ -0.48
SMU1-201ENST00000397149 GNMTQ14749 295 aa12.08□□□□□ -0.48
SMU1-201ENST00000397149 KLHL22Q53GT1 634 aa12.08□□□□□ -0.48
SMU1-201ENST00000397149 ZC3H14Q6PJT7 736 aaKnown RBP12.08□□□□□ -0.48
SMU1-201ENST00000397149 GALNT10Q86SR1 603 aa12.08□□□□□ -0.48
SMU1-201ENST00000397149 FAM156AQ8NDB6 213 aa12.08□□□□□ -0.48
SMU1-201ENST00000397149 OR4D6Q8NGJ1 314 aa12.08□□□□□ -0.48
SMU1-201ENST00000397149 ACTR10Q9NZ32 417 aa12.08□□□□□ -0.48
SMU1-201ENST00000397149 TMEM2Q9UHN6 1383 aa12.08□□□□□ -0.48
SMU1-201ENST00000397149 SOX1O00570 391 aaPredicted RBP12.08□□□□□ -0.48
SMU1-201ENST00000397149 FGF1P05230 155 aa12.08□□□□□ -0.48
SMU1-201ENST00000397149 GLDCP23378 1020 aa12.08□□□□□ -0.48
SMU1-201ENST00000397149 RIDAP52758 137 aaKnown RBP12.08□□□□□ -0.48
SMU1-201ENST00000397149 ZNF616Q08AN1 781 aa12.08□□□□□ -0.48
SMU1-201ENST00000397149 ZNF283Q8N7M2 679 aa12.08□□□□□ -0.48
SMU1-201ENST00000397149 SIDT2Q8NBJ9 832 aaKnown RBP12.08□□□□□ -0.48
SMU1-201ENST00000397149 THAP3Q8WTV1 239 aaPredicted RBP12.08□□□□□ -0.48
SMU1-201ENST00000397149 POLMQ9NP87 494 aaPredicted RBP12.08□□□□□ -0.48
SMU1-201ENST00000397149 POT1Q9NUX5 634 aa12.08□□□□□ -0.48
SMU1-201ENST00000397149 RAB26Q9ULW5 256 aa12.08□□□□□ -0.48
SMU1-201ENST00000397149 C11orf98E9PRG8 122 aa12.08□□□□□ -0.48
SMU1-201ENST00000397149 H7C417 338 aa12.08□□□□□ -0.48
SMU1-201ENST00000397149 MPZL2O60487 215 aa12.08□□□□□ -0.48
SMU1-201ENST00000397149 SGCAQ16586 387 aa12.08□□□□□ -0.48
SMU1-201ENST00000397149 PDSS1Q5T2R2 415 aa12.08□□□□□ -0.48
SMU1-201ENST00000397149 TSEN2Q8NCE0 465 aaKnown RBP12.08□□□□□ -0.48
SMU1-201ENST00000397149 FAM46DQ8NEK8 389 aa12.08□□□□□ -0.48
SMU1-201ENST00000397149 TIFAQ96CG3 184 aa12.08□□□□□ -0.48
SMU1-201ENST00000397149 SGCZQ96LD1 299 aa12.08□□□□□ -0.48
SMU1-201ENST00000397149 CYP2S1Q96SQ9 504 aa12.08□□□□□ -0.48
SMU1-201ENST00000397149 NDC1Q9BTX1 674 aa12.08□□□□□ -0.48
SMU1-201ENST00000397149 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.08□□□□□ -0.48
SMU1-201ENST00000397149 HMGXB4Q9UGU5 601 aa12.08□□□□□ -0.48
SMU1-201ENST00000397149 NPHP4O75161 1426 aaPredicted RBP12.07□□□□□ -0.48
SMU1-201ENST00000397149 ENDOUP21128 410 aaKnown RBP12.07□□□□□ -0.48
SMU1-201ENST00000397149 ROR2Q01974 943 aaKnown RBP12.07□□□□□ -0.48
SMU1-201ENST00000397149 LAPTM5Q13571 262 aa12.07□□□□□ -0.48
SMU1-201ENST00000397149 TIGD6Q17RP2 521 aa12.07□□□□□ -0.48
SMU1-201ENST00000397149 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.07□□□□□ -0.48
SMU1-201ENST00000397149 HACD2Q6Y1H2 254 aa12.07□□□□□ -0.48
SMU1-201ENST00000397149 USP43Q70EL4 1123 aa12.07□□□□□ -0.48
SMU1-201ENST00000397149 ZSCAN1Q8NBB4 408 aa12.07□□□□□ -0.48
SMU1-201ENST00000397149 PNPLA2Q96AD5 504 aa12.07□□□□□ -0.48
SMU1-201ENST00000397149 ZNF578Q96N58 590 aaPredicted RBP12.07□□□□□ -0.48
SMU1-201ENST00000397149 RNF157Q96PX1 679 aa12.07□□□□□ -0.48
SMU1-201ENST00000397149 PAPOLGQ9BWT3 736 aaKnown RBP12.07□□□□□ -0.48
SMU1-201ENST00000397149 SLC22A4Q9H015 551 aa12.07□□□□□ -0.48
SMU1-201ENST00000397149 GLRA2P23416 452 aa12.07□□□□□ -0.48
SMU1-201ENST00000397149 MTPNP58546 118 aa12.07□□□□□ -0.48
SMU1-201ENST00000397149 FASTKD3Q14CZ7 662 aaKnown RBP12.07□□□□□ -0.48
SMU1-201ENST00000397149 DCST2Q5T1A1 773 aa12.07□□□□□ -0.48
SMU1-201ENST00000397149 ATPAF1Q5TC12 328 aaPredicted RBP12.07□□□□□ -0.48
SMU1-201ENST00000397149 TUBA3EQ6PEY2 450 aa12.07□□□□□ -0.48
SMU1-201ENST00000397149 GJD3Q8N144 294 aa12.07□□□□□ -0.48
SMU1-201ENST00000397149 HSPBAP1Q96EW2 488 aa12.07□□□□□ -0.48
SMU1-201ENST00000397149 UROC1Q96N76 676 aa12.07□□□□□ -0.48
SMU1-201ENST00000397149 SLC17A7Q9P2U7 560 aa12.07□□□□□ -0.48
SMU1-201ENST00000397149 TCAF2A6NFQ2 919 aa12.07□□□□□ -0.48
SMU1-201ENST00000397149 SIGLEC16A6NMB1 481 aa12.07□□□□□ -0.48
SMU1-201ENST00000397149 DISC1C4P0D8 188 aa12.07□□□□□ -0.48
SMU1-201ENST00000397149 ADAMDEC1O15204 470 aa12.07□□□□□ -0.48
SMU1-201ENST00000397149 RPP40O75818 363 aaKnown RBP12.07□□□□□ -0.48
SMU1-201ENST00000397149 SYNGR4O95473 234 aa12.07□□□□□ -0.48
SMU1-201ENST00000397149 TGFB1P01137 390 aa12.07□□□□□ -0.48
SMU1-201ENST00000397149 CLCN4P51793 760 aa12.07□□□□□ -0.48
SMU1-201ENST00000397149 TAF10Q12962 218 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms