RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 IL17BQ9UHF5 180 aa14.05□□□□□ -0.16
SEC13-208ENST00000397109 SNRNP200O75643 2136 aaKnown RBP14.04□□□□□ -0.16
SEC13-208ENST00000397109 RGS16O15492 202 aaPredicted RBP14.04□□□□□ -0.16
SEC13-208ENST00000397109 RECKO95980 971 aa14.04□□□□□ -0.16
SEC13-208ENST00000397109 HBQ1P09105 142 aa14.04□□□□□ -0.16
SEC13-208ENST00000397109 GSTA2P09210 222 aa14.04□□□□□ -0.16
SEC13-208ENST00000397109 SFTPCP11686 197 aa14.04□□□□□ -0.16
SEC13-208ENST00000397109 TCN2P20062 427 aa14.04□□□□□ -0.16
SEC13-208ENST00000397109 PEBP1P30086 187 aaKnown RBP14.04□□□□□ -0.16
SEC13-208ENST00000397109 CLCN7P51798 805 aa14.04□□□□□ -0.16
SEC13-208ENST00000397109 CYP4F2P78329 520 aa14.04□□□□□ -0.16
SEC13-208ENST00000397109 DNASE1L3Q13609 305 aa14.04□□□□□ -0.16
SEC13-208ENST00000397109 TBR1Q16650 682 aa14.04□□□□□ -0.16
SEC13-208ENST00000397109 ACSBG2Q5FVE4 666 aa14.04□□□□□ -0.16
SEC13-208ENST00000397109 UGT3A1Q6NUS8 523 aa14.04□□□□□ -0.16
SEC13-208ENST00000397109 CNSTQ6PJW8 725 aa14.04□□□□□ -0.16
SEC13-208ENST00000397109 CDHR3Q6ZTQ4 885 aa14.04□□□□□ -0.16
SEC13-208ENST00000397109 TDRPQ86YL5 185 aa14.04□□□□□ -0.16
SEC13-208ENST00000397109 GPR135Q8IZ08 494 aa14.04□□□□□ -0.16
SEC13-208ENST00000397109 LINC01555Q8NAE3 123 aa14.04□□□□□ -0.16
SEC13-208ENST00000397109 C2CD4AQ8NCU7 369 aaPredicted RBP14.04□□□□□ -0.16
SEC13-208ENST00000397109 OR1L3Q8NH93 324 aa14.04□□□□□ -0.16
SEC13-208ENST00000397109 OR2W6PQ8NHA6 318 aa14.04□□□□□ -0.16
SEC13-208ENST00000397109 EXTL1Q92935 676 aa14.04□□□□□ -0.16
SEC13-208ENST00000397109 FAM136AQ96C01 138 aa14.04□□□□□ -0.16
SEC13-208ENST00000397109 RNF31Q96EP0 1072 aa14.04□□□□□ -0.16
SEC13-208ENST00000397109 MED8Q96G25 268 aa14.04□□□□□ -0.16
SEC13-208ENST00000397109 CAPS2Q9BXY5 557 aa14.04□□□□□ -0.16
SEC13-208ENST00000397109 GPR87Q9BY21 358 aa14.04□□□□□ -0.16
SEC13-208ENST00000397109 SLC7A5P2Q9GIP4 190 aa14.04□□□□□ -0.16
SEC13-208ENST00000397109 KLHL25Q9H0H3 589 aa14.04□□□□□ -0.16
SEC13-208ENST00000397109 IARS2Q9NSE4 1012 aaKnown RBP14.04□□□□□ -0.16
SEC13-208ENST00000397109 SPATA7Q9P0W8 599 aa14.04□□□□□ -0.16
SEC13-208ENST00000397109 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.04□□□□□ -0.16
SEC13-208ENST00000397109 DHRS7Q9Y394 339 aa14.04□□□□□ -0.16
SEC13-208ENST00000397109 PCDHGA6Q9Y5G7 932 aa14.04□□□□□ -0.16
SEC13-208ENST00000397109 PIEZO2Q9H5I5 2752 aa14.04□□□□□ -0.16
SEC13-208ENST00000397109 E7EQ34 232 aa14.03□□□□□ -0.16
SEC13-208ENST00000397109 TERTO14746 1132 aaKnown RBP14.03□□□□□ -0.16
SEC13-208ENST00000397109 NKX2-8O15522 239 aa14.03□□□□□ -0.16
SEC13-208ENST00000397109 CDH16O75309 829 aa14.03□□□□□ -0.16
SEC13-208ENST00000397109 KATNA1O75449 491 aa14.03□□□□□ -0.16
SEC13-208ENST00000397109 HAUS5O94927 633 aa14.03□□□□□ -0.16
SEC13-208ENST00000397109 CATP04040 527 aaKnown RBP14.03□□□□□ -0.16
SEC13-208ENST00000397109 ENO3P13929 434 aaPredicted RBP14.03□□□□□ -0.16
SEC13-208ENST00000397109 F8A1P23610 371 aa14.03□□□□□ -0.16
SEC13-208ENST00000397109 PPP2R2AP63151 447 aa14.03□□□□□ -0.16
SEC13-208ENST00000397109 C19orf57Q0VDD7 668 aa14.03□□□□□ -0.16
SEC13-208ENST00000397109 CDC20Q12834 499 aa14.03□□□□□ -0.16
SEC13-208ENST00000397109 KLHL38Q2WGJ6 581 aa14.03□□□□□ -0.16
SEC13-208ENST00000397109 LINC00303Q3SY05 128 aa14.03□□□□□ -0.16
SEC13-208ENST00000397109 HP1BP3Q5SSJ5 553 aaPredicted RBP14.03□□□□□ -0.16
SEC13-208ENST00000397109 ZNF549Q6P9A3 640 aa14.03□□□□□ -0.16
SEC13-208ENST00000397109 BORAQ6PGQ7 559 aa14.03□□□□□ -0.16
SEC13-208ENST00000397109 KIAA0408Q6ZU52 694 aa14.03□□□□□ -0.16
SEC13-208ENST00000397109 ANKMY2Q8IV38 441 aa14.03□□□□□ -0.16
SEC13-208ENST00000397109 HMGCLL1Q8TB92 370 aa14.03□□□□□ -0.16
SEC13-208ENST00000397109 CT55Q8WUE5 264 aa14.03□□□□□ -0.16
SEC13-208ENST00000397109 INPP5DQ92835 1189 aa14.03□□□□□ -0.16
SEC13-208ENST00000397109 IL17FQ96PD4 163 aa14.03□□□□□ -0.16
SEC13-208ENST00000397109 AARSD1Q9BTE6 412 aaKnown RBP14.03□□□□□ -0.16
SEC13-208ENST00000397109 ACTR5Q9H9F9 607 aaPredicted RBP14.03□□□□□ -0.16
SEC13-208ENST00000397109 FAM60AQ9NP50 221 aa14.03□□□□□ -0.16
SEC13-208ENST00000397109 GALPQ9UBC7 116 aa14.03□□□□□ -0.16
SEC13-208ENST00000397109 ACTL7BQ9Y614 415 aa14.03□□□□□ -0.16
SEC13-208ENST00000397109 AP1M2Q9Y6Q5 423 aa14.03□□□□□ -0.16
SEC13-208ENST00000397109 ATMQ13315 3056 aa14.03□□□□□ -0.16
SEC13-208ENST00000397109 MEN1O00255 615 aa14.02□□□□□ -0.16
SEC13-208ENST00000397109 EIF3FO00303 357 aaPredicted RBP14.02□□□□□ -0.16
SEC13-208ENST00000397109 VPS26AO75436 327 aa14.02□□□□□ -0.16
SEC13-208ENST00000397109 PSIP1O75475 530 aaKnown RBP14.02□□□□□ -0.16
SEC13-208ENST00000397109 SHBGP04278 402 aa14.02□□□□□ -0.16
SEC13-208ENST00000397109 MPC1LP0DKB6 136 aa14.02□□□□□ -0.16
SEC13-208ENST00000397109 CBSLP0DN79 551 aa14.02□□□□□ -0.16
SEC13-208ENST00000397109 ERVK-10P10266 1014 aa14.02□□□□□ -0.16
SEC13-208ENST00000397109 CBSP35520 551 aa14.02□□□□□ -0.16
SEC13-208ENST00000397109 HSD17B2P37059 387 aa14.02□□□□□ -0.16
SEC13-208ENST00000397109 BDKRB1P46663 353 aa14.02□□□□□ -0.16
SEC13-208ENST00000397109 GYS2P54840 703 aa14.02□□□□□ -0.16
SEC13-208ENST00000397109 RPS15P62841 145 aaKnown RBP14.02□□□□□ -0.16
SEC13-208ENST00000397109 MPP1Q00013 466 aa14.02□□□□□ -0.16
SEC13-208ENST00000397109 LY6DQ14210 128 aa14.02□□□□□ -0.16
SEC13-208ENST00000397109 ARHGAP19Q14CB8 494 aa14.02□□□□□ -0.16
SEC13-208ENST00000397109 SF1Q15637 639 aaKnown RBP14.02□□□□□ -0.16
SEC13-208ENST00000397109 ZIC1Q15915 447 aa14.02□□□□□ -0.16
SEC13-208ENST00000397109 GALNT7Q86SF2 657 aa14.02□□□□□ -0.16
SEC13-208ENST00000397109 CNTN4Q8IWV2 1026 aa14.02□□□□□ -0.16
SEC13-208ENST00000397109 C2orf73Q8N5S3 287 aaPredicted RBP14.02□□□□□ -0.16
SEC13-208ENST00000397109 OR9A1PQ8NGU1 263 aa14.02□□□□□ -0.16
SEC13-208ENST00000397109 MR1Q95460 341 aa14.02□□□□□ -0.16
SEC13-208ENST00000397109 CLIP3Q96DZ5 547 aa14.02□□□□□ -0.16
SEC13-208ENST00000397109 CERS2Q96G23 380 aa14.02□□□□□ -0.16
SEC13-208ENST00000397109 DPH2Q9BQC3 489 aaPredicted RBP14.02□□□□□ -0.16
SEC13-208ENST00000397109 CENPHQ9H3R5 247 aa14.02□□□□□ -0.16
SEC13-208ENST00000397109 LRRC4CQ9HCJ2 640 aa14.02□□□□□ -0.16
SEC13-208ENST00000397109 MOCS1Q9NZB8 636 aa14.02□□□□□ -0.16
SEC13-208ENST00000397109 CIDEBQ9UHD4 219 aa14.02□□□□□ -0.16
SEC13-208ENST00000397109 LGALS13Q9UHV8 139 aa14.02□□□□□ -0.16
SEC13-208ENST00000397109 NOVA2Q9UNW9 492 aaKnown RBP14.02□□□□□ -0.16
SEC13-208ENST00000397109 PLCL2Q9UPR0 1127 aa14.02□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms