RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 SMIM10Q96HG1 83 aa10.21□□□□□ -0.77
NUP98-205ENST00000397007 SEC16BQ96JE7 1060 aa10.21□□□□□ -0.77
NUP98-205ENST00000397007 IL17FQ96PD4 163 aa10.21□□□□□ -0.77
NUP98-205ENST00000397007 OSGEPL1Q9H4B0 414 aa10.21□□□□□ -0.77
NUP98-205ENST00000397007 PCDHGA3Q9Y5H0 932 aa10.21□□□□□ -0.77
NUP98-205ENST00000397007 SPAARA0A1B0GVQ0 90 aa10.21□□□□□ -0.78
NUP98-205ENST00000397007 NRP2O60462 931 aa10.21□□□□□ -0.78
NUP98-205ENST00000397007 SNX2O60749 519 aa10.21□□□□□ -0.78
NUP98-205ENST00000397007 GLRA3O75311 464 aa10.21□□□□□ -0.78
NUP98-205ENST00000397007 FGF5P12034 268 aa10.21□□□□□ -0.78
NUP98-205ENST00000397007 CSHL1Q14406 222 aa10.21□□□□□ -0.78
NUP98-205ENST00000397007 CCDC153Q494R4 210 aa10.21□□□□□ -0.78
NUP98-205ENST00000397007 N4BP2L1Q5TBK1 243 aaPredicted RBP10.21□□□□□ -0.78
NUP98-205ENST00000397007 SLCO4C1Q6ZQN7 724 aa10.21□□□□□ -0.78
NUP98-205ENST00000397007 LRRC70Q7Z2Q7 622 aa10.21□□□□□ -0.78
NUP98-205ENST00000397007 LAS2Q8IYD9 372 aa10.21□□□□□ -0.78
NUP98-205ENST00000397007 AFAP1L2Q8N4X5 818 aa10.21□□□□□ -0.78
NUP98-205ENST00000397007 GATA6Q92908 595 aa10.21□□□□□ -0.78
NUP98-205ENST00000397007 ALKBH8Q96BT7 664 aaKnown RBP10.21□□□□□ -0.78
NUP98-205ENST00000397007 ZNF501Q96CX3 271 aaPredicted RBP10.21□□□□□ -0.78
NUP98-205ENST00000397007 PPM1MQ96MI6 270 aa10.21□□□□□ -0.78
NUP98-205ENST00000397007 NTMT1Q9BV86 223 aa10.21□□□□□ -0.78
NUP98-205ENST00000397007 CCDC68Q9H2F9 335 aa10.21□□□□□ -0.78
NUP98-205ENST00000397007 MRPL46Q9H2W6 279 aaKnown RBP10.21□□□□□ -0.78
NUP98-205ENST00000397007 RHBGQ9H310 441 aa10.21□□□□□ -0.78
NUP98-205ENST00000397007 KCNK4Q9NYG8 393 aa10.21□□□□□ -0.78
NUP98-205ENST00000397007 KLHL18O94889 574 aa10.2□□□□□ -0.78
NUP98-205ENST00000397007 CATP04040 527 aaKnown RBP10.2□□□□□ -0.78
NUP98-205ENST00000397007 KRT4P19013 534 aa10.2□□□□□ -0.78
NUP98-205ENST00000397007 REEP5Q00765 189 aa10.2□□□□□ -0.78
NUP98-205ENST00000397007 MC2RQ01718 297 aa10.2□□□□□ -0.78
NUP98-205ENST00000397007 TRAF3Q13114 568 aa10.2□□□□□ -0.78
NUP98-205ENST00000397007 ADPRMQ3LIE5 342 aa10.2□□□□□ -0.78
NUP98-205ENST00000397007 ZNF678Q5SXM1 525 aa10.2□□□□□ -0.78
NUP98-205ENST00000397007 ATG9BQ674R7 924 aa10.2□□□□□ -0.78
NUP98-205ENST00000397007 FBXO42Q6P3S6 717 aa10.2□□□□□ -0.78
NUP98-205ENST00000397007 ZNF761Q86XN6 746 aaPredicted RBP10.2□□□□□ -0.78
NUP98-205ENST00000397007 OR2A5Q96R48 311 aa10.2□□□□□ -0.78
NUP98-205ENST00000397007 PLCD4Q9BRC7 762 aa10.2□□□□□ -0.78
NUP98-205ENST00000397007 PITHD1Q9GZP4 211 aaPredicted RBP10.2□□□□□ -0.78
NUP98-205ENST00000397007 SPNS1Q9H2V7 528 aa10.2□□□□□ -0.78
NUP98-205ENST00000397007 PELI2Q9HAT8 420 aa10.2□□□□□ -0.78
NUP98-205ENST00000397007 FBXO8Q9NRD0 319 aa10.2□□□□□ -0.78
NUP98-205ENST00000397007 XPR1Q9UBH6 696 aa10.2□□□□□ -0.78
NUP98-205ENST00000397007 NEUROG3Q9Y4Z2 214 aa10.2□□□□□ -0.78
NUP98-205ENST00000397007 UBXN8O00124 270 aa10.2□□□□□ -0.78
NUP98-205ENST00000397007 UBFD1O14562 309 aaKnown RBP10.2□□□□□ -0.78
NUP98-205ENST00000397007 UGDHO60701 494 aa10.2□□□□□ -0.78
NUP98-205ENST00000397007 FGF3P11487 239 aaPredicted RBP10.2□□□□□ -0.78
NUP98-205ENST00000397007 CYP2A7P20853 494 aa10.2□□□□□ -0.78
NUP98-205ENST00000397007 TYK2P29597 1187 aa10.2□□□□□ -0.78
NUP98-205ENST00000397007 FAM83EQ2M2I3 478 aa10.2□□□□□ -0.78
NUP98-205ENST00000397007 UNC50Q53HI1 259 aa10.2□□□□□ -0.78
NUP98-205ENST00000397007 CREB3L4Q8TEY5 395 aa10.2□□□□□ -0.78
NUP98-205ENST00000397007 CXorf40BQ96DE9 158 aa10.2□□□□□ -0.78
NUP98-205ENST00000397007 CCDC74BQ96LY2 380 aa10.2□□□□□ -0.78
NUP98-205ENST00000397007 TMEM237Q96Q45 408 aa10.2□□□□□ -0.78
NUP98-205ENST00000397007 FAM60AQ9NP50 221 aa10.2□□□□□ -0.78
NUP98-205ENST00000397007 CCL27Q9Y4X3 112 aa10.2□□□□□ -0.78
NUP98-205ENST00000397007 FAM186AA6NE01 2351 aa10.2□□□□□ -0.78
NUP98-205ENST00000397007 A0A0J9YY10 115 aa10.2□□□□□ -0.78
NUP98-205ENST00000397007 PMS2P1A4D2B8 440 aa10.2□□□□□ -0.78
NUP98-205ENST00000397007 PDZK1P1A8MUH7 402 aa10.2□□□□□ -0.78
NUP98-205ENST00000397007 DUX1O43812 170 aa10.2□□□□□ -0.78
NUP98-205ENST00000397007 CTSVO60911 334 aa10.2□□□□□ -0.78
NUP98-205ENST00000397007 IPO13O94829 963 aaKnown RBP10.2□□□□□ -0.78
NUP98-205ENST00000397007 ADRB1P08588 477 aa10.2□□□□□ -0.78
NUP98-205ENST00000397007 PSMB5P28074 263 aa10.2□□□□□ -0.78
NUP98-205ENST00000397007 OAS2P29728 719 aaKnown RBP10.2□□□□□ -0.78
NUP98-205ENST00000397007 MLLT3P42568 568 aaPredicted RBP10.2□□□□□ -0.78
NUP98-205ENST00000397007 ATXN3P54252 364 aaPredicted RBP10.2□□□□□ -0.78
NUP98-205ENST00000397007 WDR4P57081 412 aaKnown RBP10.2□□□□□ -0.78
NUP98-205ENST00000397007 ABATP80404 500 aa10.2□□□□□ -0.78
NUP98-205ENST00000397007 RAPH1Q70E73 1250 aa10.2□□□□□ -0.78
NUP98-205ENST00000397007 HDXQ7Z353 690 aa10.2□□□□□ -0.78
NUP98-205ENST00000397007 OTUD6BQ8N6M0 293 aa10.2□□□□□ -0.78
NUP98-205ENST00000397007 WDR20Q8TBZ3 569 aa10.2□□□□□ -0.78
NUP98-205ENST00000397007 SMPDL3AQ92484 453 aa10.2□□□□□ -0.78
NUP98-205ENST00000397007 ZUFSPQ96AP4 578 aa10.2□□□□□ -0.78
NUP98-205ENST00000397007 CCDC77Q9BR77 488 aa10.2□□□□□ -0.78
NUP98-205ENST00000397007 HGH1Q9BTY7 390 aa10.2□□□□□ -0.78
NUP98-205ENST00000397007 SLC32A1Q9H598 525 aa10.2□□□□□ -0.78
NUP98-205ENST00000397007 ALG9Q9H6U8 611 aa10.2□□□□□ -0.78
NUP98-205ENST00000397007 SLC17A7Q9P2U7 560 aa10.2□□□□□ -0.78
NUP98-205ENST00000397007 MOSPD1Q9UJG1 213 aa10.2□□□□□ -0.78
NUP98-205ENST00000397007 CDV3Q9UKY7 258 aaKnown RBP10.2□□□□□ -0.78
NUP98-205ENST00000397007 LOC400499M0QZD8 3231 aa10.19□□□□□ -0.78
NUP98-205ENST00000397007 UQCRHLA0A096LP55 91 aa10.19□□□□□ -0.78
NUP98-205ENST00000397007 OR6C74A6NCV1 312 aa10.19□□□□□ -0.78
NUP98-205ENST00000397007 C2orf74A8MZ97 194 aa10.19□□□□□ -0.78
NUP98-205ENST00000397007 DLGAP3O95886 979 aa10.19□□□□□ -0.78
NUP98-205ENST00000397007 UQCRHP07919 91 aa10.19□□□□□ -0.78
NUP98-205ENST00000397007 RBP1P09455 135 aa10.19□□□□□ -0.78
NUP98-205ENST00000397007 SLCO1A2P46721 670 aa10.19□□□□□ -0.78
NUP98-205ENST00000397007 CSNK1G2P78368 415 aa10.19□□□□□ -0.78
NUP98-205ENST00000397007 MAP7Q14244 749 aa10.19□□□□□ -0.78
NUP98-205ENST00000397007 C16orf72Q14CZ0 275 aa10.19□□□□□ -0.78
NUP98-205ENST00000397007 TCEA2Q15560 299 aa10.19□□□□□ -0.78
NUP98-205ENST00000397007 PRTGQ2VWP7 1150 aa10.19□□□□□ -0.78
NUP98-205ENST00000397007 ICE2Q659A1 982 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms