RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 HNRNPCL1O60812 293 aaKnown RBP12.3□□□□□ -0.44
TRIM39-204ENST00000396548 LBPP18428 481 aa12.3□□□□□ -0.44
TRIM39-204ENST00000396548 CCND1P24385 295 aa12.3□□□□□ -0.44
TRIM39-204ENST00000396548 IRX1P78414 480 aaPredicted RBP12.3□□□□□ -0.44
TRIM39-204ENST00000396548 RPL6Q02878 288 aaKnown RBP12.3□□□□□ -0.44
TRIM39-204ENST00000396548 SMU1Q2TAY7 513 aa12.3□□□□□ -0.44
TRIM39-204ENST00000396548 SUSD1Q6UWL2 747 aa12.3□□□□□ -0.44
TRIM39-204ENST00000396548 SPATA19Q7Z5L4 167 aa12.3□□□□□ -0.44
TRIM39-204ENST00000396548 KLHDC7BQ96G42 594 aa12.3□□□□□ -0.44
TRIM39-204ENST00000396548 BRINP2Q9C0B6 783 aa12.3□□□□□ -0.44
TRIM39-204ENST00000396548 ICKQ9UPZ9 632 aa12.3□□□□□ -0.44
TRIM39-204ENST00000396548 TDRKHQ9Y2W6 561 aaKnown RBP12.3□□□□□ -0.44
TRIM39-204ENST00000396548 FFAR3O14843 346 aa12.29□□□□□ -0.44
TRIM39-204ENST00000396548 GPR42O15529 346 aa12.29□□□□□ -0.44
TRIM39-204ENST00000396548 CPOXP36551 454 aa12.29□□□□□ -0.44
TRIM39-204ENST00000396548 ZNF33BQ06732 778 aa12.29□□□□□ -0.44
TRIM39-204ENST00000396548 SQLEQ14534 574 aa12.29□□□□□ -0.44
TRIM39-204ENST00000396548 HERC3Q15034 1050 aa12.29□□□□□ -0.44
TRIM39-204ENST00000396548 KIAA0040Q15053 153 aa12.29□□□□□ -0.44
TRIM39-204ENST00000396548 ZRSR2Q15696 482 aaKnown RBP12.29□□□□□ -0.44
TRIM39-204ENST00000396548 HID1Q8IV36 788 aa12.29□□□□□ -0.44
TRIM39-204ENST00000396548 SYTL1Q8IYJ3 562 aa12.29□□□□□ -0.44
TRIM39-204ENST00000396548 MIPEPQ99797 713 aa12.29□□□□□ -0.44
TRIM39-204ENST00000396548 ACPTQ9BZG2 426 aa12.29□□□□□ -0.44
TRIM39-204ENST00000396548 TM9SF3Q9HD45 589 aa12.29□□□□□ -0.44
TRIM39-204ENST00000396548 SLC52A3Q9NQ40 469 aa12.29□□□□□ -0.44
TRIM39-204ENST00000396548 CCDC177Q9NQR7 707 aaPredicted RBP12.29□□□□□ -0.44
TRIM39-204ENST00000396548 ZNF490Q9ULM2 529 aaPredicted RBP12.29□□□□□ -0.44
TRIM39-204ENST00000396548 LAMA1P25391 3075 aa12.29□□□□□ -0.44
TRIM39-204ENST00000396548 PCM1Q15154 2024 aa12.29□□□□□ -0.44
TRIM39-204ENST00000396548 ULK1O75385 1050 aa12.29□□□□□ -0.44
TRIM39-204ENST00000396548 RASGRP1O95267 797 aa12.29□□□□□ -0.44
TRIM39-204ENST00000396548 CELA2BP08218 269 aaPredicted RBP12.29□□□□□ -0.44
TRIM39-204ENST00000396548 GNAZP19086 355 aa12.29□□□□□ -0.44
TRIM39-204ENST00000396548 HMOX2P30519 316 aa12.29□□□□□ -0.44
TRIM39-204ENST00000396548 RACK1P63244 317 aaKnown RBP12.29□□□□□ -0.44
TRIM39-204ENST00000396548 USP39Q53GS9 565 aaKnown RBP12.29□□□□□ -0.44
TRIM39-204ENST00000396548 RD3Q7Z3Z2 195 aa12.29□□□□□ -0.44
TRIM39-204ENST00000396548 OR2L8Q8NGY9 312 aa12.29□□□□□ -0.44
TRIM39-204ENST00000396548 UTP4Q969X6 686 aaKnown RBP12.29□□□□□ -0.44
TRIM39-204ENST00000396548 TUBGCP3Q96CW5 907 aa12.29□□□□□ -0.44
TRIM39-204ENST00000396548 SPACA7Q96KW9 195 aa12.29□□□□□ -0.44
TRIM39-204ENST00000396548 SDR39U1Q9NRG7 319 aaPredicted RBP12.29□□□□□ -0.44
TRIM39-204ENST00000396548 AIG1Q9NVV5 245 aa12.29□□□□□ -0.44
TRIM39-204ENST00000396548 TSC22D4Q9Y3Q8 395 aa12.29□□□□□ -0.44
TRIM39-204ENST00000396548 HEBP2Q9Y5Z4 205 aa12.29□□□□□ -0.44
TRIM39-204ENST00000396548 CLGNO14967 610 aa12.28□□□□□ -0.44
TRIM39-204ENST00000396548 MAP3K13O43283 966 aa12.28□□□□□ -0.44
TRIM39-204ENST00000396548 COX4I1P13073 169 aa12.28□□□□□ -0.44
TRIM39-204ENST00000396548 VARSP26640 1264 aaKnown RBP12.28□□□□□ -0.44
TRIM39-204ENST00000396548 CD38P28907 300 aa12.28□□□□□ -0.44
TRIM39-204ENST00000396548 HNF4AP41235 474 aa12.28□□□□□ -0.44
TRIM39-204ENST00000396548 ERVK-8P63133 956 aa12.28□□□□□ -0.44
TRIM39-204ENST00000396548 CPSF6Q16630 551 aaKnown RBP eCLIP12.28□□□□□ -0.44
TRIM39-204ENST00000396548 XKR6Q5GH73 641 aa12.28□□□□□ -0.44
TRIM39-204ENST00000396548 CATSPEREQ5SY80 951 aa12.28□□□□□ -0.44
TRIM39-204ENST00000396548 WDR5BQ86VZ2 330 aa12.28□□□□□ -0.44
TRIM39-204ENST00000396548 PARGQ86W56 976 aa12.28□□□□□ -0.44
TRIM39-204ENST00000396548 FAM129CQ86XR2 697 aa12.28□□□□□ -0.44
TRIM39-204ENST00000396548 FUNDC1Q8IVP5 155 aa12.28□□□□□ -0.44
TRIM39-204ENST00000396548 LAS2Q8IYD9 372 aa12.28□□□□□ -0.44
TRIM39-204ENST00000396548 OR52E1Q8NGJ3 308 aa12.28□□□□□ -0.44
TRIM39-204ENST00000396548 SNX19Q92543 992 aa12.28□□□□□ -0.44
TRIM39-204ENST00000396548 FCRL1Q96LA6 429 aa12.28□□□□□ -0.44
TRIM39-204ENST00000396548 HBEGFQ99075 208 aa12.28□□□□□ -0.44
TRIM39-204ENST00000396548 C1orf21Q9H246 121 aa12.28□□□□□ -0.44
TRIM39-204ENST00000396548 IMP3Q9NV31 184 aaKnown RBP12.28□□□□□ -0.44
TRIM39-204ENST00000396548 ASIC5Q9NY37 505 aa12.28□□□□□ -0.44
TRIM39-204ENST00000396548 SNX6Q9UNH7 406 aa12.28□□□□□ -0.44
TRIM39-204ENST00000396548 CAPN7Q9Y6W3 813 aa12.28□□□□□ -0.44
TRIM39-204ENST00000396548 SLC28A1O00337 649 aa12.28□□□□□ -0.44
TRIM39-204ENST00000396548 PEX11AO75192 247 aa12.28□□□□□ -0.44
TRIM39-204ENST00000396548 F3P13726 295 aa12.28□□□□□ -0.44
TRIM39-204ENST00000396548 PTPN4P29074 926 aa12.28□□□□□ -0.44
TRIM39-204ENST00000396548 PEBP1P30086 187 aaKnown RBP12.28□□□□□ -0.44
TRIM39-204ENST00000396548 YBX1P67809 324 aaKnown RBP12.28□□□□□ -0.44
TRIM39-204ENST00000396548 EMX2Q04743 252 aa12.28□□□□□ -0.44
TRIM39-204ENST00000396548 GSTA3Q16772 222 aa12.28□□□□□ -0.44
TRIM39-204ENST00000396548 IYDQ6PHW0 289 aa12.28□□□□□ -0.44
TRIM39-204ENST00000396548 TSSK4Q6SA08 328 aa12.28□□□□□ -0.44
TRIM39-204ENST00000396548 NXPE4Q6UWF7 544 aa12.28□□□□□ -0.44
TRIM39-204ENST00000396548 PHACTR4Q8IZ21 702 aa12.28□□□□□ -0.44
TRIM39-204ENST00000396548 OR4K1Q8NGD4 311 aa12.28□□□□□ -0.44
TRIM39-204ENST00000396548 SLC5A11Q8WWX8 675 aa12.28□□□□□ -0.44
TRIM39-204ENST00000396548 MRGBPQ9NV56 204 aa12.28□□□□□ -0.44
TRIM39-204ENST00000396548 RIC8BQ9NVN3 520 aa12.28□□□□□ -0.44
TRIM39-204ENST00000396548 SPATA6Q9NWH7 488 aaPredicted RBP12.28□□□□□ -0.44
TRIM39-204ENST00000396548 GEMIN8Q9NWZ8 242 aaKnown RBP12.28□□□□□ -0.44
TRIM39-204ENST00000396548 TAS2R1Q9NYW7 299 aa12.28□□□□□ -0.44
TRIM39-204ENST00000396548 KCNE2Q9Y6J6 123 aa12.28□□□□□ -0.44
TRIM39-204ENST00000396548 DMDP11532 3685 aa12.28□□□□□ -0.44
TRIM39-204ENST00000396548 TECTAO75443 2155 aa12.28□□□□□ -0.44
TRIM39-204ENST00000396548 CSF2P04141 144 aa12.28□□□□□ -0.44
TRIM39-204ENST00000396548 C1GALT1C1LP0DN25 315 aa12.28□□□□□ -0.44
TRIM39-204ENST00000396548 MAOBP27338 520 aa12.28□□□□□ -0.44
TRIM39-204ENST00000396548 SLC19A1P41440 591 aa12.28□□□□□ -0.44
TRIM39-204ENST00000396548 ACTR1BP42025 376 aa12.28□□□□□ -0.44
TRIM39-204ENST00000396548 HALP42357 657 aa12.28□□□□□ -0.44
TRIM39-204ENST00000396548 ACADVLP49748 655 aa12.28□□□□□ -0.44
TRIM39-204ENST00000396548 RAB28P51157 221 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms