RNA–Protein interactions for RNA: ENST00000396521.3

EXOSC3-202, Transcript of exosome component 3, humanhuman

TSL 2 BASIC

Gene EXOSC3, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-202ENST00000396521 KPNA5O15131 536 aa16.73■□□□□ 0.27
EXOSC3-202ENST00000396521 PHF2O75151 1096 aa16.73■□□□□ 0.27
EXOSC3-202ENST00000396521 SLCO2B1O94956 709 aa16.73■□□□□ 0.27
EXOSC3-202ENST00000396521 CRYABP02511 175 aaKnown RBP16.73■□□□□ 0.27
EXOSC3-202ENST00000396521 PTMAP06454 111 aaKnown RBP16.73■□□□□ 0.27
EXOSC3-202ENST00000396521 ICAM2P13598 275 aa16.73■□□□□ 0.27
EXOSC3-202ENST00000396521 PRF1P14222 555 aa16.73■□□□□ 0.27
EXOSC3-202ENST00000396521 CXCR2P25025 360 aa16.73■□□□□ 0.27
EXOSC3-202ENST00000396521 CYLC1P35663 651 aaPredicted RBP16.73■□□□□ 0.27
EXOSC3-202ENST00000396521 TNFSF10P50591 281 aa16.73■□□□□ 0.27
EXOSC3-202ENST00000396521 CDH17Q12864 832 aa16.73■□□□□ 0.27
EXOSC3-202ENST00000396521 TMED2Q15363 201 aa16.73■□□□□ 0.27
EXOSC3-202ENST00000396521 ZXDCQ2QGD7 858 aaPredicted RBP16.73■□□□□ 0.27
EXOSC3-202ENST00000396521 MUM1Q2TAK8 710 aa16.73■□□□□ 0.27
EXOSC3-202ENST00000396521 WASHC2DQ5SRD0 308 aa16.73■□□□□ 0.27
EXOSC3-202ENST00000396521 GDF7Q7Z4P5 450 aa16.73■□□□□ 0.27
EXOSC3-202ENST00000396521 HMGCLL1Q8TB92 370 aa16.73■□□□□ 0.27
EXOSC3-202ENST00000396521 MVB12AQ96EY5 273 aa16.73■□□□□ 0.27
EXOSC3-202ENST00000396521 IMPACTQ9P2X3 320 aa16.73■□□□□ 0.27
EXOSC3-202ENST00000396521 C3orf18Q9UK00 162 aa16.73■□□□□ 0.27
EXOSC3-202ENST00000396521 KLHL20Q9Y2M5 609 aa16.73■□□□□ 0.27
EXOSC3-202ENST00000396521 MRPS2Q9Y399 296 aaKnown RBP16.73■□□□□ 0.27
EXOSC3-202ENST00000396521 IGLV3-12A0A075B6K2 115 aa16.72■□□□□ 0.27
EXOSC3-202ENST00000396521 NSG1A0A0A6YYJ2 146 aa16.72■□□□□ 0.27
EXOSC3-202ENST00000396521 KLHL18O94889 574 aa16.72■□□□□ 0.27
EXOSC3-202ENST00000396521 BMP10O95393 424 aa16.72■□□□□ 0.27
EXOSC3-202ENST00000396521 SERPINA7P05543 415 aa16.72■□□□□ 0.27
EXOSC3-202ENST00000396521 ZGLP1P0C6A0 271 aa16.72■□□□□ 0.27
EXOSC3-202ENST00000396521 CCR7P32248 378 aa16.72■□□□□ 0.27
EXOSC3-202ENST00000396521 CCNFP41002 786 aa16.72■□□□□ 0.27
EXOSC3-202ENST00000396521 GRIA3P42263 894 aa16.72■□□□□ 0.27
EXOSC3-202ENST00000396521 OR1D4P47884 311 aa16.72■□□□□ 0.27
EXOSC3-202ENST00000396521 KLC1Q07866 573 aa16.72■□□□□ 0.27
EXOSC3-202ENST00000396521 Q0VFX4 171 aa16.72■□□□□ 0.27
EXOSC3-202ENST00000396521 TMEM207Q6UWW9 146 aa16.72■□□□□ 0.27
EXOSC3-202ENST00000396521 FAM20CQ8IXL6 584 aa16.72■□□□□ 0.27
EXOSC3-202ENST00000396521 ZNF808Q8N4W9 903 aaPredicted RBP16.72■□□□□ 0.27
EXOSC3-202ENST00000396521 DNAAF3Q8N9W5 541 aa16.72■□□□□ 0.27
EXOSC3-202ENST00000396521 FAM71DQ8N9W8 422 aa16.72■□□□□ 0.27
EXOSC3-202ENST00000396521 OR4L1Q8NH43 312 aa16.72■□□□□ 0.27
EXOSC3-202ENST00000396521 MAGEC3Q8TD91 643 aa16.72■□□□□ 0.27
EXOSC3-202ENST00000396521 HDAC10Q969S8 669 aa16.72■□□□□ 0.27
EXOSC3-202ENST00000396521 MAGEB10Q96LZ2 347 aaPredicted RBP16.72■□□□□ 0.27
EXOSC3-202ENST00000396521 RNF32Q9H0A6 362 aa16.72■□□□□ 0.27
EXOSC3-202ENST00000396521 ZNF160Q9HCG1 818 aa16.72■□□□□ 0.27
EXOSC3-202ENST00000396521 ABI3Q9P2A4 366 aa16.72■□□□□ 0.27
EXOSC3-202ENST00000396521 ANAPC5Q9UJX4 755 aa16.72■□□□□ 0.27
EXOSC3-202ENST00000396521 PRICKLE3O43900 615 aaPredicted RBP16.71■□□□□ 0.27
EXOSC3-202ENST00000396521 ALOX12BO75342 701 aa16.71■□□□□ 0.27
EXOSC3-202ENST00000396521 IPO7O95373 1038 aaKnown RBP16.71■□□□□ 0.27
EXOSC3-202ENST00000396521 METTL18O95568 372 aa16.71■□□□□ 0.27
EXOSC3-202ENST00000396521 PRR35P0CG20 571 aa16.71■□□□□ 0.27
EXOSC3-202ENST00000396521 POU3F2P20265 443 aaPredicted RBP16.71■□□□□ 0.27
EXOSC3-202ENST00000396521 MCM3P25205 808 aa16.71■□□□□ 0.27
EXOSC3-202ENST00000396521 STIP1P31948 543 aaKnown RBP16.71■□□□□ 0.27
EXOSC3-202ENST00000396521 SOX11P35716 441 aa16.71■□□□□ 0.27
EXOSC3-202ENST00000396521 TDGF1P3P51864 188 aa16.71■□□□□ 0.27
EXOSC3-202ENST00000396521 VSX2P58304 361 aaPredicted RBP16.71■□□□□ 0.27
EXOSC3-202ENST00000396521 ACVR1Q04771 509 aa16.71■□□□□ 0.27
EXOSC3-202ENST00000396521 RBPJQ06330 500 aa16.71■□□□□ 0.27
EXOSC3-202ENST00000396521 TBX2Q13207 712 aaPredicted RBP16.71■□□□□ 0.27
EXOSC3-202ENST00000396521 GRB7Q14451 532 aa16.71■□□□□ 0.27
EXOSC3-202ENST00000396521 FASTKD1Q53R41 847 aaKnown RBP16.71■□□□□ 0.27
EXOSC3-202ENST00000396521 GFRALQ6UXV0 394 aa16.71■□□□□ 0.27
EXOSC3-202ENST00000396521 NAPRTQ6XQN6 538 aa16.71■□□□□ 0.27
EXOSC3-202ENST00000396521 BNC2Q6ZN30 1099 aaPredicted RBP16.71■□□□□ 0.27
EXOSC3-202ENST00000396521 SHISA6Q6ZSJ9 500 aa16.71■□□□□ 0.27
EXOSC3-202ENST00000396521 ZGRF1Q86YA3 2104 aa16.71■□□□□ 0.27
EXOSC3-202ENST00000396521 TMEM151BQ8IW70 566 aa16.71■□□□□ 0.27
EXOSC3-202ENST00000396521 CATSPER1Q8NEC5 780 aa16.71■□□□□ 0.27
EXOSC3-202ENST00000396521 CFAP61Q8NHU2 1237 aa16.71■□□□□ 0.27
EXOSC3-202ENST00000396521 SUN3Q8TAQ9 357 aa16.71■□□□□ 0.27
EXOSC3-202ENST00000396521 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.71■□□□□ 0.27
EXOSC3-202ENST00000396521 PANX3Q96QZ0 392 aa16.71■□□□□ 0.27
EXOSC3-202ENST00000396521 C14orf105Q9NVL8 296 aa16.71■□□□□ 0.27
EXOSC3-202ENST00000396521 RIC8BQ9NVN3 520 aa16.71■□□□□ 0.27
EXOSC3-202ENST00000396521 C2CD3Q4AC94 2353 aa16.71■□□□□ 0.26
EXOSC3-202ENST00000396521 BTNL10A8MVZ5 291 aa16.7■□□□□ 0.26
EXOSC3-202ENST00000396521 PRMT5O14744 637 aaPredicted RBP16.7■□□□□ 0.26
EXOSC3-202ENST00000396521 OR1I1O60431 355 aa16.7■□□□□ 0.26
EXOSC3-202ENST00000396521 ERVK-10P10266 1014 aa16.7■□□□□ 0.26
EXOSC3-202ENST00000396521 ADRA1DP25100 572 aa16.7■□□□□ 0.26
EXOSC3-202ENST00000396521 AOAHP28039 575 aa16.7■□□□□ 0.26
EXOSC3-202ENST00000396521 TTPAP49638 278 aa16.7■□□□□ 0.26
EXOSC3-202ENST00000396521 CSE1LP55060 971 aaKnown RBP16.7■□□□□ 0.26
EXOSC3-202ENST00000396521 CASP6P55212 293 aa16.7■□□□□ 0.26
EXOSC3-202ENST00000396521 PRAMEP78395 509 aa16.7■□□□□ 0.26
EXOSC3-202ENST00000396521 ZNF630Q2M218 657 aaPredicted RBP16.7■□□□□ 0.26
EXOSC3-202ENST00000396521 XKRXQ6PP77 449 aa16.7■□□□□ 0.26
EXOSC3-202ENST00000396521 OR13J1Q8NGT2 312 aa16.7■□□□□ 0.26
EXOSC3-202ENST00000396521 OR6P1Q8NGX9 317 aa16.7■□□□□ 0.26
EXOSC3-202ENST00000396521 ITLN2Q8WWU7 325 aaPredicted RBP16.7■□□□□ 0.26
EXOSC3-202ENST00000396521 PSMF1Q92530 271 aa16.7■□□□□ 0.26
EXOSC3-202ENST00000396521 FOPNLQ96NB1 174 aa16.7■□□□□ 0.26
EXOSC3-202ENST00000396521 FAM118BQ9BPY3 351 aa16.7■□□□□ 0.26
EXOSC3-202ENST00000396521 UTP6Q9NYH9 597 aaKnown RBP16.7■□□□□ 0.26
EXOSC3-202ENST00000396521 ZC3H7BQ9UGR2 993 aaKnown RBP16.7■□□□□ 0.26
EXOSC3-202ENST00000396521 TEKT2Q9UIF3 430 aa16.7■□□□□ 0.26
EXOSC3-202ENST00000396521 MAU2Q9Y6X3 613 aa16.7■□□□□ 0.26
EXOSC3-202ENST00000396521 FBN2P35556 2912 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms