RNA–Protein interactions for RNA: ENST00000396366.6

FXN-203, Transcript of frataxin, humanhuman

TSL 2 BASIC

Gene FXN, Length 922 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-203ENST00000396366 GIMAP7Q8NHV1 300 aa17.54■□□□□ 0.4
FXN-203ENST00000396366 HMGCLL1Q8TB92 370 aa17.54■□□□□ 0.4
FXN-203ENST00000396366 ACTRT1Q8TDG2 376 aa17.54■□□□□ 0.4
FXN-203ENST00000396366 ZUFSPQ96AP4 578 aa17.54■□□□□ 0.4
FXN-203ENST00000396366 SELENOSQ9BQE4 189 aa17.54■□□□□ 0.4
FXN-203ENST00000396366 ACAT2Q9BWD1 397 aa17.54■□□□□ 0.4
FXN-203ENST00000396366 KCNF1Q9H3M0 494 aa17.54■□□□□ 0.4
FXN-203ENST00000396366 XAB2Q9HCS7 855 aaKnown RBP17.54■□□□□ 0.4
FXN-203ENST00000396366 LUZP4Q9P127 313 aa17.54■□□□□ 0.4
FXN-203ENST00000396366 MAD1L1Q9Y6D9 718 aa17.54■□□□□ 0.4
FXN-203ENST00000396366 LOC105369274A0A096LPK9 316 aa17.53■□□□□ 0.4
FXN-203ENST00000396366 LOC102723532A0A0G2JNH3 316 aa17.53■□□□□ 0.4
FXN-203ENST00000396366 A0A0J9YVX5 310 aa17.53■□□□□ 0.4
FXN-203ENST00000396366 TTLL8A6PVC2 850 aa17.53■□□□□ 0.4
FXN-203ENST00000396366 TARM1B6A8C7 271 aa17.53■□□□□ 0.4
FXN-203ENST00000396366 E5RI56 91 aa17.53■□□□□ 0.4
FXN-203ENST00000396366 PHF2O75151 1096 aa17.53■□□□□ 0.4
FXN-203ENST00000396366 USP1O94782 785 aa17.53■□□□□ 0.4
FXN-203ENST00000396366 ATP5DP30049 168 aa17.53■□□□□ 0.4
FXN-203ENST00000396366 SLC1A2P43004 574 aa17.53■□□□□ 0.4
FXN-203ENST00000396366 MAGEA3P43357 314 aa17.53■□□□□ 0.4
FXN-203ENST00000396366 OR1D4P47884 311 aa17.53■□□□□ 0.4
FXN-203ENST00000396366 VSX2P58304 361 aaPredicted RBP17.53■□□□□ 0.4
FXN-203ENST00000396366 SRSF1Q07955 248 aaKnown RBP eCLIP17.53■□□□□ 0.4
FXN-203ENST00000396366 CUL1Q13616 776 aa17.53■□□□□ 0.4
FXN-203ENST00000396366 THOC5Q13769 683 aaKnown RBP17.53■□□□□ 0.4
FXN-203ENST00000396366 WASHC2DQ5SRD0 308 aa17.53■□□□□ 0.4
FXN-203ENST00000396366 SHISA6Q6ZSJ9 500 aa17.53■□□□□ 0.4
FXN-203ENST00000396366 COX15Q7KZN9 410 aa17.53■□□□□ 0.4
FXN-203ENST00000396366 OR4N4Q8N0Y3 316 aa17.53■□□□□ 0.4
FXN-203ENST00000396366 RAB42Q8N4Z0 105 aa17.53■□□□□ 0.4
FXN-203ENST00000396366 OR9A1PQ8NGU1 263 aa17.53■□□□□ 0.4
FXN-203ENST00000396366 DLG3Q92796 817 aa17.53■□□□□ 0.4
FXN-203ENST00000396366 PTERQ96BW5 349 aa17.53■□□□□ 0.4
FXN-203ENST00000396366 ZNF285Q96NJ3 590 aa17.53■□□□□ 0.4
FXN-203ENST00000396366 PKP4Q99569 1192 aa17.53■□□□□ 0.4
FXN-203ENST00000396366 C17orf62Q9BQA9 187 aa17.53■□□□□ 0.4
FXN-203ENST00000396366 SYNPO2LQ9H987 977 aa17.53■□□□□ 0.4
FXN-203ENST00000396366 GRPEL1Q9HAV7 217 aa17.53■□□□□ 0.4
FXN-203ENST00000396366 CUTCQ9NTM9 273 aa17.53■□□□□ 0.4
FXN-203ENST00000396366 C20orf96Q9NUD7 363 aaPredicted RBP17.53■□□□□ 0.4
FXN-203ENST00000396366 INTS10Q9NVR2 710 aaKnown RBP17.53■□□□□ 0.4
FXN-203ENST00000396366 P4HTMQ9NXG6 502 aa17.53■□□□□ 0.4
FXN-203ENST00000396366 UTP20O75691 2785 aaKnown RBP17.53■□□□□ 0.4
FXN-203ENST00000396366 PTPN13Q12923 2485 aa17.53■□□□□ 0.4
FXN-203ENST00000396366 A0A1B0GX78 115 aa17.52■□□□□ 0.4
FXN-203ENST00000396366 DSCR3O14972 297 aa17.52■□□□□ 0.4
FXN-203ENST00000396366 PSIP1O75475 530 aaKnown RBP17.52■□□□□ 0.4
FXN-203ENST00000396366 HAUS5O94927 633 aa17.52■□□□□ 0.4
FXN-203ENST00000396366 ARSFP54793 590 aa17.52■□□□□ 0.4
FXN-203ENST00000396366 RRADP55042 308 aa17.52■□□□□ 0.4
FXN-203ENST00000396366 MPP1Q00013 466 aa17.52■□□□□ 0.4
FXN-203ENST00000396366 ARMC3Q5W041 872 aa17.52■□□□□ 0.4
FXN-203ENST00000396366 FBXO42Q6P3S6 717 aa17.52■□□□□ 0.4
FXN-203ENST00000396366 OVCH1Q7RTY7 1134 aa17.52■□□□□ 0.4
FXN-203ENST00000396366 MAGEC3Q8TD91 643 aa17.52■□□□□ 0.4
FXN-203ENST00000396366 NAP1L3Q99457 506 aaPredicted RBP17.52■□□□□ 0.4
FXN-203ENST00000396366 DPH7Q9BTV6 452 aa17.52■□□□□ 0.4
FXN-203ENST00000396366 SLC6A20Q9NP91 592 aa17.52■□□□□ 0.4
FXN-203ENST00000396366 GPR83Q9NYM4 423 aa17.52■□□□□ 0.4
FXN-203ENST00000396366 SPATA7Q9P0W8 599 aa17.52■□□□□ 0.4
FXN-203ENST00000396366 SNX12Q9UMY4 172 aa17.52■□□□□ 0.4
FXN-203ENST00000396366 ZNF451Q9Y4E5 1061 aa17.52■□□□□ 0.4
FXN-203ENST00000396366 MRFAP1Q9Y605 127 aa17.52■□□□□ 0.4
FXN-203ENST00000396366 MAU2Q9Y6X3 613 aa17.52■□□□□ 0.4
FXN-203ENST00000396366 MYO1CO00159 1063 aa17.51■□□□□ 0.39
FXN-203ENST00000396366 BANF1O75531 89 aa17.51■□□□□ 0.39
FXN-203ENST00000396366 EIF2S1P05198 315 aaKnown RBP17.51■□□□□ 0.39
FXN-203ENST00000396366 CD97P48960 835 aa17.51■□□□□ 0.39
FXN-203ENST00000396366 TSTA3Q13630 321 aaPredicted RBP17.51■□□□□ 0.39
FXN-203ENST00000396366 GRM7Q14831 915 aa17.51■□□□□ 0.39
FXN-203ENST00000396366 NKG7Q16617 165 aa17.51■□□□□ 0.39
FXN-203ENST00000396366 LONRF1Q17RB8 773 aa17.51■□□□□ 0.39
FXN-203ENST00000396366 HSP90AA5PQ58FG0 334 aa17.51■□□□□ 0.39
FXN-203ENST00000396366 TCTE1Q5JU00 501 aa17.51■□□□□ 0.39
FXN-203ENST00000396366 DCAF10Q5QP82 559 aa17.51■□□□□ 0.39
FXN-203ENST00000396366 CYHR1Q6ZMK1 362 aa17.51■□□□□ 0.39
FXN-203ENST00000396366 PPIL6Q8IXY8 311 aa17.51■□□□□ 0.39
FXN-203ENST00000396366 RBMXL3Q8N7X1 1067 aaKnown RBP17.51■□□□□ 0.39
FXN-203ENST00000396366 PPFIBP2Q8ND30 876 aa17.51■□□□□ 0.39
FXN-203ENST00000396366 ZC3H7BQ9UGR2 993 aaKnown RBP17.51■□□□□ 0.39
FXN-203ENST00000396366 VPS9D1Q9Y2B5 631 aa17.51■□□□□ 0.39
FXN-203ENST00000396366 KLK4Q9Y5K2 254 aa17.51■□□□□ 0.39
FXN-203ENST00000396366 DOPEY2Q9Y3R5 2298 aa17.5■□□□□ 0.39
FXN-203ENST00000396366 LRRK2Q5S007 2527 aa17.5■□□□□ 0.39
FXN-203ENST00000396366 IGKV1-8A0A0C4DH67 115 aa17.5■□□□□ 0.39
FXN-203ENST00000396366 HYKKA2RU49 373 aa17.5■□□□□ 0.39
FXN-203ENST00000396366 FITM1A5D6W6 292 aa17.5■□□□□ 0.39
FXN-203ENST00000396366 PEX12O00623 359 aa17.5■□□□□ 0.39
FXN-203ENST00000396366 ALOX12BO75342 701 aa17.5■□□□□ 0.39
FXN-203ENST00000396366 SORBS2O94875 1100 aaKnown RBP17.5■□□□□ 0.39
FXN-203ENST00000396366 FKBP9O95302 570 aa17.5■□□□□ 0.39
FXN-203ENST00000396366 ONECUT2O95948 504 aa17.5■□□□□ 0.39
FXN-203ENST00000396366 CD63P08962 238 aa17.5■□□□□ 0.39
FXN-203ENST00000396366 ERGP11308 486 aa17.5■□□□□ 0.39
FXN-203ENST00000396366 FNTAP49354 379 aa17.5■□□□□ 0.39
FXN-203ENST00000396366 MSS51Q4VC12 460 aa17.5■□□□□ 0.39
FXN-203ENST00000396366 PRR30Q53SZ7 412 aaPredicted RBP17.5■□□□□ 0.39
FXN-203ENST00000396366 RNASEH2BQ5TBB1 312 aaKnown RBP17.5■□□□□ 0.39
FXN-203ENST00000396366 JMJD6Q6NYC1 403 aaPredicted RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms