RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 RETP07949 1114 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 FGF3P11487 239 aaPredicted RBP3.3□□□□□ -1.88
VPS13C-203ENST00000395896 ADRA1AP35348 466 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 DPPA4Q7L190 304 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 ZSWIM9Q86XI8 627 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 RGL4Q8IZJ4 473 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 ARRDC2Q8TBH0 407 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 PKMYT1Q99640 499 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 TMEM79Q9BSE2 394 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 SMURF2Q9HAU4 748 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 WDR70Q9NW82 654 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 AP1G1O43747 822 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 PRLP01236 227 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 GATMP50440 423 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 ZNF140P52738 457 aaPredicted RBP3.3□□□□□ -1.88
VPS13C-203ENST00000395896 LBX1P52954 281 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 DEFA1P59665 94 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 DEFA3P59666 94 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 HNRNPKP61978 463 aaKnown RBP eCLIP3.3□□□□□ -1.88
VPS13C-203ENST00000395896 MBTPS1Q14703 1052 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 WDR45BQ5MNZ6 344 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 KLHDC8BQ8IXV7 354 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 C8orf59Q8N0T1 100 aaPredicted RBP3.3□□□□□ -1.88
VPS13C-203ENST00000395896 AMER2Q8N7J2 671 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 NSMCE3Q96MG7 304 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 PCED1AQ9H1Q7 454 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 AK1P00568 194 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 NR2C1P13056 603 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 RABIFP47224 123 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 CYP4F8P98187 520 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 VEZF1Q14119 521 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 PLA2G4EQ3MJ16 856 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 PRAMEF14Q5SWL7 426 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 PRAMEF13Q5VWM6 474 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 GCNT7Q6ZNI0 430 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 STK32CQ86UX6 486 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 MMAAQ8IVH4 418 aaKnown RBP3.3□□□□□ -1.88
VPS13C-203ENST00000395896 FBXO15Q8NCQ5 510 aaPredicted RBP3.3□□□□□ -1.88
VPS13C-203ENST00000395896 OR6C4Q8NGE1 309 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 BADQ92934 168 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 FUBP1Q96AE4 644 aaKnown RBP3.3□□□□□ -1.88
VPS13C-203ENST00000395896 CCDC90BQ9GZT6 254 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 PCDH12Q9NPG4 1184 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 WNT6Q9Y6F9 365 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 LAMA3Q16787 3333 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 BUD23O43709 281 aaKnown RBP3.3□□□□□ -1.88
VPS13C-203ENST00000395896 PDHA1P08559 390 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 NME5P56597 212 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 CLDN8P56748 225 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 ARF5P84085 180 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 KIR2DS3Q14952 304 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 SMAD1Q15797 465 aaKnown RBP3.3□□□□□ -1.88
VPS13C-203ENST00000395896 CYP4V2Q6ZWL3 525 aaPredicted RBP3.3□□□□□ -1.88
VPS13C-203ENST00000395896 TXNDC5Q8NBS9 432 aaKnown RBP3.3□□□□□ -1.88
VPS13C-203ENST00000395896 PMM1Q92871 262 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 ZDHHC12Q96GR4 267 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 SLC38A2Q96QD8 506 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 EHD3Q9NZN3 535 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 FANCMQ8IYD8 2048 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 AP3D1O14617 1153 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 CHRM1P11229 460 aaPredicted RBP3.3□□□□□ -1.88
VPS13C-203ENST00000395896 BPIP17213 487 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 MYL12AP19105 171 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 ATP6V1B2P21281 511 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 INPP1P49441 399 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 CRISP3P54108 245 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 IL1RL1Q01638 556 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 STX4Q12846 297 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 CST6Q15828 149 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 IRAK1BP1Q5VVH5 260 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 HDDC3Q8N4P3 179 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 TSTD1Q8NFU3 115 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 HAVCR2Q8TDQ0 301 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 PPP1R13LQ8WUF5 828 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 RFKQ969G6 155 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 RTP3Q9BQQ7 232 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 AKTIPQ9H8T0 292 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 CLDND1Q9NY35 253 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 GALPQ9UBC7 116 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 LRRC42Q9Y546 428 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 LRRK2Q5S007 2527 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 TANC1Q9C0D5 1861 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 WASH3PC4AMC7 463 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 PRAMEF26H0Y7S4 382 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 CLOCKO15516 846 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 KLKB1P03952 638 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 IFNW1P05000 195 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 DRD2P14416 443 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 LRRC36Q1X8D7 754 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 AFMIDQ63HM1 303 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 GLYATQ6IB77 296 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 BLOC1S3Q6QNY0 202 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 SLC46A2Q9BY10 475 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 IL1RL2Q9HB29 575 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 PDFQ9HBH1 243 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 DLGAP2Q9P1A6 1054 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 SLCO3A1Q9UIG8 710 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 DNAJC15Q9Y5T4 150 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 C2orf78A6NCI8 922 aa3.3□□□□□ -1.88
VPS13C-203ENST00000395896 ISM1B1AKI9 464 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms