RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 TEFQ10587 303 aa4.66□□□□□ -1.66
HMGB1P10-201ENST00000395823 CBX3Q13185 183 aa4.66□□□□□ -1.66
HMGB1P10-201ENST00000395823 SNTA1Q13424 505 aa4.66□□□□□ -1.66
HMGB1P10-201ENST00000395823 PPA1Q15181 289 aa4.66□□□□□ -1.66
HMGB1P10-201ENST00000395823 ITPRIPL2Q3MIP1 535 aa4.66□□□□□ -1.66
HMGB1P10-201ENST00000395823 CYP4A22Q5TCH4 519 aa4.66□□□□□ -1.66
HMGB1P10-201ENST00000395823 PRAMEF8Q5VWM4 474 aa4.66□□□□□ -1.66
HMGB1P10-201ENST00000395823 CNSTQ6PJW8 725 aa4.66□□□□□ -1.66
HMGB1P10-201ENST00000395823 C9orf47Q6ZRZ4 202 aa4.66□□□□□ -1.66
HMGB1P10-201ENST00000395823 NUDT13Q86X67 352 aa4.66□□□□□ -1.66
HMGB1P10-201ENST00000395823 SFR1Q86XK3 245 aa4.66□□□□□ -1.66
HMGB1P10-201ENST00000395823 FBXL14Q8N1E6 418 aa4.66□□□□□ -1.66
HMGB1P10-201ENST00000395823 ELP5Q8TE02 316 aa4.66□□□□□ -1.66
HMGB1P10-201ENST00000395823 PANX3Q96QZ0 392 aa4.66□□□□□ -1.66
HMGB1P10-201ENST00000395823 MYADMQ96S97 322 aa4.66□□□□□ -1.66
HMGB1P10-201ENST00000395823 PKP4Q99569 1192 aa4.66□□□□□ -1.66
HMGB1P10-201ENST00000395823 POLR3CQ9BUI4 534 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P10-201ENST00000395823 SNX25Q9H3E2 840 aa4.66□□□□□ -1.66
HMGB1P10-201ENST00000395823 SLITRK6Q9H5Y7 841 aa4.66□□□□□ -1.66
HMGB1P10-201ENST00000395823 APOBEC3GQ9HC16 384 aaKnown RBP4.66□□□□□ -1.66
HMGB1P10-201ENST00000395823 OLFML3Q9NRN5 406 aa4.66□□□□□ -1.66
HMGB1P10-201ENST00000395823 MALT1Q9UDY8 824 aa4.66□□□□□ -1.66
HMGB1P10-201ENST00000395823 STX8Q9UNK0 236 aa4.66□□□□□ -1.66
HMGB1P10-201ENST00000395823 TRIM17Q9Y577 477 aa4.66□□□□□ -1.66
HMGB1P10-201ENST00000395823 KLK4Q9Y5K2 254 aa4.66□□□□□ -1.66
HMGB1P10-201ENST00000395823 TEX264Q9Y6I9 313 aa4.66□□□□□ -1.66
HMGB1P10-201ENST00000395823 PRSS46E5RG02 174 aa4.65□□□□□ -1.67
HMGB1P10-201ENST00000395823 CTSVO60911 334 aa4.65□□□□□ -1.67
HMGB1P10-201ENST00000395823 RPS6KA5O75582 802 aa4.65□□□□□ -1.67
HMGB1P10-201ENST00000395823 BCAS2O75934 225 aaPredicted RBP4.65□□□□□ -1.67
HMGB1P10-201ENST00000395823 PPP1R3DO95685 299 aa4.65□□□□□ -1.67
HMGB1P10-201ENST00000395823 BAG3O95817 575 aa4.65□□□□□ -1.67
HMGB1P10-201ENST00000395823 SERPING1P05155 500 aa4.65□□□□□ -1.67
HMGB1P10-201ENST00000395823 DGKAP23743 735 aa4.65□□□□□ -1.67
HMGB1P10-201ENST00000395823 PDX1P52945 283 aa4.65□□□□□ -1.67
HMGB1P10-201ENST00000395823 RPS18P62269 152 aaKnown RBP4.65□□□□□ -1.67
HMGB1P10-201ENST00000395823 ILF2Q12905 390 aaKnown RBP4.65□□□□□ -1.67
HMGB1P10-201ENST00000395823 TAF10Q12962 218 aa4.65□□□□□ -1.67
HMGB1P10-201ENST00000395823 NONOQ15233 471 aaKnown RBP eCLIP4.65□□□□□ -1.67
HMGB1P10-201ENST00000395823 SPOUT1Q5T280 376 aaKnown RBP4.65□□□□□ -1.67
HMGB1P10-201ENST00000395823 LCE5AQ5TCM9 118 aa4.65□□□□□ -1.67
HMGB1P10-201ENST00000395823 FAM46CQ5VWP2 391 aa4.65□□□□□ -1.67
HMGB1P10-201ENST00000395823 RABEPKQ7Z6M1 372 aa4.65□□□□□ -1.67
HMGB1P10-201ENST00000395823 PEX5LQ8IYB4 626 aa4.65□□□□□ -1.67
HMGB1P10-201ENST00000395823 DCP1BQ8IZD4 617 aaKnown RBP4.65□□□□□ -1.67
HMGB1P10-201ENST00000395823 RTL3Q8N8U3 475 aaKnown RBP4.65□□□□□ -1.67
HMGB1P10-201ENST00000395823 OR4K1Q8NGD4 311 aa4.65□□□□□ -1.67
HMGB1P10-201ENST00000395823 NCOA7Q8NI08 942 aa4.65□□□□□ -1.67
HMGB1P10-201ENST00000395823 LRRC8CQ8TDW0 803 aa4.65□□□□□ -1.67
HMGB1P10-201ENST00000395823 ST7LQ8TDW4 575 aa4.65□□□□□ -1.67
HMGB1P10-201ENST00000395823 NEUROG1Q92886 237 aa4.65□□□□□ -1.67
HMGB1P10-201ENST00000395823 PYCR2Q96C36 320 aa4.65□□□□□ -1.67
HMGB1P10-201ENST00000395823 TSPAN18Q96SJ8 248 aa4.65□□□□□ -1.67
HMGB1P10-201ENST00000395823 CCDC3Q9BQI4 270 aa4.65□□□□□ -1.67
HMGB1P10-201ENST00000395823 ATG101Q9BSB4 218 aa4.65□□□□□ -1.67
HMGB1P10-201ENST00000395823 PRRG4Q9BZD6 226 aa4.65□□□□□ -1.67
HMGB1P10-201ENST00000395823 RNPEPL1Q9HAU8 725 aa4.65□□□□□ -1.67
HMGB1P10-201ENST00000395823 TCF7L2Q9NQB0 619 aa4.65□□□□□ -1.67
HMGB1P10-201ENST00000395823 SLC38A7Q9NVC3 462 aa4.65□□□□□ -1.67
HMGB1P10-201ENST00000395823 SPG21Q9NZD8 308 aa4.65□□□□□ -1.67
HMGB1P10-201ENST00000395823 TRPC4Q9UBN4 977 aa4.65□□□□□ -1.67
HMGB1P10-201ENST00000395823 PA2G4Q9UQ80 394 aaKnown RBP4.65□□□□□ -1.67
HMGB1P10-201ENST00000395823 IGHV4OR15-8A0A075B7B6 117 aa4.64□□□□□ -1.67
HMGB1P10-201ENST00000395823 A0A1W2PPI3 338 aa4.64□□□□□ -1.67
HMGB1P10-201ENST00000395823 CCL24O00175 119 aa4.64□□□□□ -1.67
HMGB1P10-201ENST00000395823 SLC28A2O43868 658 aa4.64□□□□□ -1.67
HMGB1P10-201ENST00000395823 GLCEO94923 617 aa4.64□□□□□ -1.67
HMGB1P10-201ENST00000395823 IGHV4-39P01824 125 aa4.64□□□□□ -1.67
HMGB1P10-201ENST00000395823 C9P02748 559 aa4.64□□□□□ -1.67
HMGB1P10-201ENST00000395823 C8orf89P0DMQ9 161 aa4.64□□□□□ -1.67
HMGB1P10-201ENST00000395823 CTNNB1P35222 781 aa4.64□□□□□ -1.67
HMGB1P10-201ENST00000395823 MAGEB1P43366 347 aa4.64□□□□□ -1.67
HMGB1P10-201ENST00000395823 IER3P46695 156 aa4.64□□□□□ -1.67
HMGB1P10-201ENST00000395823 VAMP7P51809 220 aa4.64□□□□□ -1.67
HMGB1P10-201ENST00000395823 UCP2P55851 309 aa4.64□□□□□ -1.67
HMGB1P10-201ENST00000395823 STARD6P59095 220 aa4.64□□□□□ -1.67
HMGB1P10-201ENST00000395823 EEF1A2Q05639 463 aaKnown RBP4.64□□□□□ -1.67
HMGB1P10-201ENST00000395823 LTBQ06643 244 aa4.64□□□□□ -1.67
HMGB1P10-201ENST00000395823 KIR2DS3Q14952 304 aa4.64□□□□□ -1.67
HMGB1P10-201ENST00000395823 FUT11Q495W5 492 aa4.64□□□□□ -1.67
HMGB1P10-201ENST00000395823 ZNF770Q6IQ21 691 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P10-201ENST00000395823 CREB3L2Q70SY1 520 aa4.64□□□□□ -1.67
HMGB1P10-201ENST00000395823 ANO5Q75V66 913 aa4.64□□□□□ -1.67
HMGB1P10-201ENST00000395823 PLD3Q8IV08 490 aa4.64□□□□□ -1.67
HMGB1P10-201ENST00000395823 SAP25Q8TEE9 199 aa4.64□□□□□ -1.67
HMGB1P10-201ENST00000395823 ZNF473Q8WTR7 871 aaKnown RBP4.64□□□□□ -1.67
HMGB1P10-201ENST00000395823 WBP2Q969T9 261 aa4.64□□□□□ -1.67
HMGB1P10-201ENST00000395823 EPSTI1Q96J88 318 aa4.64□□□□□ -1.67
HMGB1P10-201ENST00000395823 GDAP1L1Q96MZ0 367 aa4.64□□□□□ -1.67
HMGB1P10-201ENST00000395823 PRAM1Q96QH2 718 aa4.64□□□□□ -1.67
HMGB1P10-201ENST00000395823 RTP3Q9BQQ7 232 aa4.64□□□□□ -1.67
HMGB1P10-201ENST00000395823 SLC29A3Q9BZD2 475 aa4.64□□□□□ -1.67
HMGB1P10-201ENST00000395823 ACPTQ9BZG2 426 aa4.64□□□□□ -1.67
HMGB1P10-201ENST00000395823 TLE6Q9H808 572 aa4.64□□□□□ -1.67
HMGB1P10-201ENST00000395823 TMEM161AQ9NX61 479 aa4.64□□□□□ -1.67
HMGB1P10-201ENST00000395823 FETUBQ9UGM5 382 aa4.64□□□□□ -1.67
HMGB1P10-201ENST00000395823 MOSPD1Q9UJG1 213 aa4.64□□□□□ -1.67
HMGB1P10-201ENST00000395823 FBXW2Q9UKT8 454 aa4.64□□□□□ -1.67
HMGB1P10-201ENST00000395823 NAP1L2Q9ULW6 460 aaPredicted RBP4.64□□□□□ -1.67
HMGB1P10-201ENST00000395823 ILVBLA1L0T0 632 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms