RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 ULBP3Q9BZM4 244 aa5.95□□□□□ -1.46
PTPN20-208ENST00000395727 CHRNA10Q9GZZ6 450 aa5.95□□□□□ -1.46
PTPN20-208ENST00000395727 WWP1Q9H0M0 922 aa5.95□□□□□ -1.46
PTPN20-208ENST00000395727 TFB2MQ9H5Q4 396 aaKnown RBP5.95□□□□□ -1.46
PTPN20-208ENST00000395727 MVB12BQ9H7P6 319 aa5.95□□□□□ -1.46
PTPN20-208ENST00000395727 GPN2Q9H9Y4 310 aaPredicted RBP5.95□□□□□ -1.46
PTPN20-208ENST00000395727 PDE7BQ9NP56 450 aa5.95□□□□□ -1.46
PTPN20-208ENST00000395727 EIF2B3Q9NR50 452 aaKnown RBP5.95□□□□□ -1.46
PTPN20-208ENST00000395727 FGF21Q9NSA1 209 aa5.95□□□□□ -1.46
PTPN20-208ENST00000395727 TRIM10Q9UDY6 481 aa5.95□□□□□ -1.46
PTPN20-208ENST00000395727 KCND3Q9UK17 655 aa5.95□□□□□ -1.46
PTPN20-208ENST00000395727 POMT2Q9UKY4 750 aa5.95□□□□□ -1.46
PTPN20-208ENST00000395727 PACSIN2Q9UNF0 486 aaPredicted RBP5.95□□□□□ -1.46
PTPN20-208ENST00000395727 PSMD13Q9UNM6 376 aa5.95□□□□□ -1.46
PTPN20-208ENST00000395727 R3HDM2Q9Y2K5 976 aaKnown RBP5.95□□□□□ -1.46
PTPN20-208ENST00000395727 KCTD3Q9Y597 815 aa5.95□□□□□ -1.46
PTPN20-208ENST00000395727 RPS6KL1Q9Y6S9 549 aa5.95□□□□□ -1.46
PTPN20-208ENST00000395727 AHCTF1Q8WYP5 2266 aa5.95□□□□□ -1.46
PTPN20-208ENST00000395727 FASNP49327 2511 aaKnown RBP5.94□□□□□ -1.46
PTPN20-208ENST00000395727 LOC400499M0QZD8 3231 aa5.94□□□□□ -1.46
PTPN20-208ENST00000395727 COL6A6A6NMZ7 2263 aa5.94□□□□□ -1.46
PTPN20-208ENST00000395727 A0A0U1RQJ8 604 aa5.94□□□□□ -1.46
PTPN20-208ENST00000395727 TCRBV7S2A1N4TA0A589 114 aa5.94□□□□□ -1.46
PTPN20-208ENST00000395727 IFRD1O00458 451 aaPredicted RBP5.94□□□□□ -1.46
PTPN20-208ENST00000395727 SUV39H1O43463 412 aa5.94□□□□□ -1.46
PTPN20-208ENST00000395727 KIF1CO43896 1103 aaKnown RBP5.94□□□□□ -1.46
PTPN20-208ENST00000395727 GAS8O95995 478 aa5.94□□□□□ -1.46
PTPN20-208ENST00000395727 FTH1P02794 183 aa5.94□□□□□ -1.46
PTPN20-208ENST00000395727 PTMAP06454 111 aaKnown RBP5.94□□□□□ -1.46
PTPN20-208ENST00000395727 ZNF28P17035 718 aa5.94□□□□□ -1.46
PTPN20-208ENST00000395727 CCR10P46092 362 aa5.94□□□□□ -1.46
PTPN20-208ENST00000395727 PPM1FP49593 454 aaPredicted RBP5.94□□□□□ -1.46
PTPN20-208ENST00000395727 POLE2P56282 527 aa5.94□□□□□ -1.46
PTPN20-208ENST00000395727 TUBB4BP68371 445 aa5.94□□□□□ -1.46
PTPN20-208ENST00000395727 CDK16Q00536 496 aa5.94□□□□□ -1.46
PTPN20-208ENST00000395727 FOXM1Q08050 763 aa5.94□□□□□ -1.46
PTPN20-208ENST00000395727 TUBB3Q13509 450 aa5.94□□□□□ -1.46
PTPN20-208ENST00000395727 TUBB2AQ13885 445 aa5.94□□□□□ -1.46
PTPN20-208ENST00000395727 BOP1Q14137 746 aaKnown RBP5.94□□□□□ -1.46
PTPN20-208ENST00000395727 SIX1Q15475 284 aaPredicted RBP5.94□□□□□ -1.46
PTPN20-208ENST00000395727 CCNG2Q16589 344 aa5.94□□□□□ -1.46
PTPN20-208ENST00000395727 SKIDA1Q1XH10 827 aa5.94□□□□□ -1.46
PTPN20-208ENST00000395727 DNTTIP2Q5QJE6 756 aaKnown RBP5.94□□□□□ -1.46
PTPN20-208ENST00000395727 IRGCQ6NXR0 463 aa5.94□□□□□ -1.46
PTPN20-208ENST00000395727 GALNT18Q6P9A2 607 aa5.94□□□□□ -1.46
PTPN20-208ENST00000395727 ZNF449Q6P9G9 518 aa5.94□□□□□ -1.46
PTPN20-208ENST00000395727 AFTPHQ6ULP2 937 aa5.94□□□□□ -1.46
PTPN20-208ENST00000395727 FAM92BQ6ZTR7 304 aa5.94□□□□□ -1.46
PTPN20-208ENST00000395727 SPATC1Q76KD6 591 aa5.94□□□□□ -1.46
PTPN20-208ENST00000395727 DET1Q7L5Y6 550 aa5.94□□□□□ -1.46
PTPN20-208ENST00000395727 APLFQ8IW19 511 aaPredicted RBP5.94□□□□□ -1.46
PTPN20-208ENST00000395727 PIANPQ8IYJ0 282 aa5.94□□□□□ -1.46
PTPN20-208ENST00000395727 LILRA3Q8N6C8 439 aaPredicted RBP5.94□□□□□ -1.46
PTPN20-208ENST00000395727 TRIM58Q8NG06 486 aa5.94□□□□□ -1.46
PTPN20-208ENST00000395727 OR13J1Q8NGT2 312 aa5.94□□□□□ -1.46
PTPN20-208ENST00000395727 STARD8Q92502 1023 aa5.94□□□□□ -1.46
PTPN20-208ENST00000395727 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.94□□□□□ -1.46
PTPN20-208ENST00000395727 STAMBPL1Q96FJ0 436 aa5.94□□□□□ -1.46
PTPN20-208ENST00000395727 CCDC140Q96MF4 163 aa5.94□□□□□ -1.46
PTPN20-208ENST00000395727 ALS2CR12Q96Q35 445 aa5.94□□□□□ -1.46
PTPN20-208ENST00000395727 MAP3K3Q99759 626 aa5.94□□□□□ -1.46
PTPN20-208ENST00000395727 CTRCQ99895 268 aa5.94□□□□□ -1.46
PTPN20-208ENST00000395727 TUBB2BQ9BVA1 445 aa5.94□□□□□ -1.46
PTPN20-208ENST00000395727 GPR87Q9BY21 358 aa5.94□□□□□ -1.46
PTPN20-208ENST00000395727 SLC25A18Q9H1K4 315 aa5.94□□□□□ -1.46
PTPN20-208ENST00000395727 LHX9Q9NQ69 397 aa5.94□□□□□ -1.46
PTPN20-208ENST00000395727 CASS4Q9NQ75 786 aa5.94□□□□□ -1.46
PTPN20-208ENST00000395727 IMP3Q9NV31 184 aaKnown RBP5.94□□□□□ -1.46
PTPN20-208ENST00000395727 HRASLS2Q9NWW9 162 aa5.94□□□□□ -1.46
PTPN20-208ENST00000395727 PAK5Q9P286 719 aa5.94□□□□□ -1.46
PTPN20-208ENST00000395727 GPR160Q9UJ42 338 aa5.94□□□□□ -1.46
PTPN20-208ENST00000395727 RARRES3Q9UL19 164 aa5.94□□□□□ -1.46
PTPN20-208ENST00000395727 DRG1Q9Y295 367 aaKnown RBP5.94□□□□□ -1.46
PTPN20-208ENST00000395727 ZNF462Q96JM2 2506 aa5.94□□□□□ -1.46
PTPN20-208ENST00000395727 KALRNO60229 2985 aa5.94□□□□□ -1.46
PTPN20-208ENST00000395727 HELZ2Q9BYK8 2649 aaKnown RBP5.93□□□□□ -1.46
PTPN20-208ENST00000395727 UBA6A0AVT1 1052 aaPredicted RBP5.93□□□□□ -1.46
PTPN20-208ENST00000395727 SLC5A10A0PJK1 596 aa5.93□□□□□ -1.46
PTPN20-208ENST00000395727 KDM1AO60341 852 aa5.93□□□□□ -1.46
PTPN20-208ENST00000395727 KIAA0754O94854 1291 aa5.93□□□□□ -1.46
PTPN20-208ENST00000395727 THBDP07204 575 aa5.93□□□□□ -1.46
PTPN20-208ENST00000395727 RAB40ALP0C0E4 278 aa5.93□□□□□ -1.46
PTPN20-208ENST00000395727 CCDC175P0C221 793 aa5.93□□□□□ -1.46
PTPN20-208ENST00000395727 OR56A5P0C7T3 313 aa5.93□□□□□ -1.46
PTPN20-208ENST00000395727 FOLR1P15328 257 aa5.93□□□□□ -1.46
PTPN20-208ENST00000395727 TCN2P20062 427 aa5.93□□□□□ -1.46
PTPN20-208ENST00000395727 ADRA1DP25100 572 aa5.93□□□□□ -1.46
PTPN20-208ENST00000395727 MSNP26038 577 aaKnown RBP5.93□□□□□ -1.46
PTPN20-208ENST00000395727 ACADLP28330 430 aa5.93□□□□□ -1.46
PTPN20-208ENST00000395727 OAS2P29728 719 aaKnown RBP5.93□□□□□ -1.46
PTPN20-208ENST00000395727 PBLDP30039 288 aaPredicted RBP5.93□□□□□ -1.46
PTPN20-208ENST00000395727 SHMT2P34897 504 aa5.93□□□□□ -1.46
PTPN20-208ENST00000395727 DLSTP36957 453 aa5.93□□□□□ -1.46
PTPN20-208ENST00000395727 PPARGP37231 505 aaPredicted RBP5.93□□□□□ -1.46
PTPN20-208ENST00000395727 MAGEA6P43360 314 aa5.93□□□□□ -1.46
PTPN20-208ENST00000395727 KPNA2P52292 529 aaKnown RBP5.93□□□□□ -1.46
PTPN20-208ENST00000395727 GFRA1P56159 465 aa5.93□□□□□ -1.46
PTPN20-208ENST00000395727 PPP1CAP62136 330 aa5.93□□□□□ -1.46
PTPN20-208ENST00000395727 PRKAA1Q13131 559 aa5.93□□□□□ -1.46
PTPN20-208ENST00000395727 KCNAB2Q13303 367 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms