RNA–Protein interactions for RNA: ENST00000394986.5

SNCA-203, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,420 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-203ENST00000394986 AGTRAPQ6RW13 159 aa19.17■□□□□ 0.66
SNCA-203ENST00000394986 OR2L3Q8NG85 312 aa19.17■□□□□ 0.66
SNCA-203ENST00000394986 PTERQ96BW5 349 aa19.17■□□□□ 0.66
SNCA-203ENST00000394986 ZNF501Q96CX3 271 aaPredicted RBP19.17■□□□□ 0.66
SNCA-203ENST00000394986 HIST1H2AHQ96KK5 128 aa19.17■□□□□ 0.66
SNCA-203ENST00000394986 UBXN10Q96LJ8 280 aa19.17■□□□□ 0.66
SNCA-203ENST00000394986 HIST1H2AJQ99878 128 aa19.17■□□□□ 0.66
SNCA-203ENST00000394986 H2AFJQ9BTM1 129 aa19.17■□□□□ 0.66
SNCA-203ENST00000394986 ASPSCR1Q9BZE9 553 aa19.17■□□□□ 0.66
SNCA-203ENST00000394986 SLC6A20Q9NP91 592 aa19.17■□□□□ 0.66
SNCA-203ENST00000394986 PCDHB11Q9Y5F2 797 aa19.17■□□□□ 0.66
SNCA-203ENST00000394986 PABPN1LA6NDY0 278 aaKnown RBP19.17■□□□□ 0.66
SNCA-203ENST00000394986 ZNF839A8K0R7 811 aa19.17■□□□□ 0.66
SNCA-203ENST00000394986 TMEM150CB9EJG8 249 aa19.17■□□□□ 0.66
SNCA-203ENST00000394986 CTSBP07858 339 aa19.17■□□□□ 0.66
SNCA-203ENST00000394986 ENO2P09104 434 aaPredicted RBP19.17■□□□□ 0.66
SNCA-203ENST00000394986 CRABP2P29373 138 aa19.17■□□□□ 0.66
SNCA-203ENST00000394986 GRIA3P42263 894 aa19.17■□□□□ 0.66
SNCA-203ENST00000394986 CSRP3P50461 194 aa19.17■□□□□ 0.66
SNCA-203ENST00000394986 TUBB4BP68371 445 aa19.17■□□□□ 0.66
SNCA-203ENST00000394986 COL9A2Q14055 689 aaPredicted RBP19.17■□□□□ 0.66
SNCA-203ENST00000394986 TGIF1Q15583 401 aa19.17■□□□□ 0.66
SNCA-203ENST00000394986 PPP1R3BQ86XI6 285 aa19.17■□□□□ 0.66
SNCA-203ENST00000394986 ALKBH8Q96BT7 664 aaKnown RBP19.17■□□□□ 0.66
SNCA-203ENST00000394986 MED8Q96G25 268 aa19.17■□□□□ 0.66
SNCA-203ENST00000394986 TCTN2Q96GX1 697 aa19.17■□□□□ 0.66
SNCA-203ENST00000394986 DHRS4Q9BTZ2 278 aa19.17■□□□□ 0.66
SNCA-203ENST00000394986 RARRES3Q9UL19 164 aa19.17■□□□□ 0.66
SNCA-203ENST00000394986 NOVA2Q9UNW9 492 aaKnown RBP19.17■□□□□ 0.66
SNCA-203ENST00000394986 DMXL2Q8TDJ6 3036 aa19.16■□□□□ 0.66
SNCA-203ENST00000394986 TEX51A0A1B0GUA7 166 aa19.16■□□□□ 0.66
SNCA-203ENST00000394986 SHBGP04278 402 aa19.16■□□□□ 0.66
SNCA-203ENST00000394986 C2P06681 752 aa19.16■□□□□ 0.66
SNCA-203ENST00000394986 FGF5P12034 268 aa19.16■□□□□ 0.66
SNCA-203ENST00000394986 EIF2S3P41091 472 aaKnown RBP19.16■□□□□ 0.66
SNCA-203ENST00000394986 SERPINB8P50452 374 aa19.16■□□□□ 0.66
SNCA-203ENST00000394986 SERPINB9P50453 376 aa19.16■□□□□ 0.66
SNCA-203ENST00000394986 NAE1Q13564 534 aa19.16■□□□□ 0.66
SNCA-203ENST00000394986 IL11RAQ14626 422 aa19.16■□□□□ 0.66
SNCA-203ENST00000394986 OR4D1Q15615 310 aa19.16■□□□□ 0.66
SNCA-203ENST00000394986 THEMIS2Q5TEJ8 643 aa19.16■□□□□ 0.66
SNCA-203ENST00000394986 PRAMEF17Q5VTA0 474 aa19.16■□□□□ 0.66
SNCA-203ENST00000394986 PWWP2BQ6NUJ5 590 aa19.16■□□□□ 0.66
SNCA-203ENST00000394986 FIGLAQ6QHK4 219 aa19.16■□□□□ 0.66
SNCA-203ENST00000394986 ADAMTSL2Q86TH1 951 aa19.16■□□□□ 0.66
SNCA-203ENST00000394986 ZNF248Q8NDW4 579 aa19.16■□□□□ 0.66
SNCA-203ENST00000394986 OR1L3Q8NH93 324 aa19.16■□□□□ 0.66
SNCA-203ENST00000394986 KCTD4Q8WVF5 259 aa19.16■□□□□ 0.66
SNCA-203ENST00000394986 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.16■□□□□ 0.66
SNCA-203ENST00000394986 ANKRD7Q92527 254 aa19.16■□□□□ 0.66
SNCA-203ENST00000394986 PYCR2Q96C36 320 aa19.16■□□□□ 0.66
SNCA-203ENST00000394986 TEFMQ96QE5 360 aaKnown RBP19.16■□□□□ 0.66
SNCA-203ENST00000394986 TRIM54Q9BYV2 358 aa19.16■□□□□ 0.66
SNCA-203ENST00000394986 B3GNT4Q9C0J1 378 aa19.16■□□□□ 0.66
SNCA-203ENST00000394986 CCDC177Q9NQR7 707 aaPredicted RBP19.16■□□□□ 0.66
SNCA-203ENST00000394986 IGSF5Q9NSI5 407 aa19.16■□□□□ 0.66
SNCA-203ENST00000394986 WDR70Q9NW82 654 aa19.16■□□□□ 0.66
SNCA-203ENST00000394986 ACSL6Q9UKU0 697 aa19.16■□□□□ 0.66
SNCA-203ENST00000394986 OARD1Q9Y530 152 aa19.16■□□□□ 0.66
SNCA-203ENST00000394986 NCF1BA6NI72 391 aaPredicted RBP19.15■□□□□ 0.66
SNCA-203ENST00000394986 NCF1CA8MVU1 366 aaPredicted RBP19.15■□□□□ 0.66
SNCA-203ENST00000394986 TRIM49D1C9J1S8 452 aa19.15■□□□□ 0.66
SNCA-203ENST00000394986 MAP3K7O43318 606 aa19.15■□□□□ 0.66
SNCA-203ENST00000394986 STK17BO94768 372 aa19.15■□□□□ 0.66
SNCA-203ENST00000394986 KIAA0754O94854 1291 aa19.15■□□□□ 0.66
SNCA-203ENST00000394986 NCF1P14598 390 aaPredicted RBP19.15■□□□□ 0.66
SNCA-203ENST00000394986 TYK2P29597 1187 aa19.15■□□□□ 0.66
SNCA-203ENST00000394986 CMPK1P30085 196 aa19.15■□□□□ 0.66
SNCA-203ENST00000394986 GABRA4P48169 554 aa19.15■□□□□ 0.66
SNCA-203ENST00000394986 AP1S2P56377 157 aa19.15■□□□□ 0.66
SNCA-203ENST00000394986 ICE2Q659A1 982 aa19.15■□□□□ 0.66
SNCA-203ENST00000394986 WDR93Q6P2C0 686 aa19.15■□□□□ 0.66
SNCA-203ENST00000394986 FRA10AC1Q70Z53 315 aa19.15■□□□□ 0.66
SNCA-203ENST00000394986 TAOK1Q7L7X3 1001 aa19.15■□□□□ 0.66
SNCA-203ENST00000394986 TBC1D1Q86TI0 1168 aaPredicted RBP19.15■□□□□ 0.66
SNCA-203ENST00000394986 CENPLQ8N0S6 344 aaPredicted RBP19.15■□□□□ 0.66
SNCA-203ENST00000394986 KCNE4Q8WWG9 221 aa19.15■□□□□ 0.66
SNCA-203ENST00000394986 FBXL8Q96CD0 374 aa19.15■□□□□ 0.66
SNCA-203ENST00000394986 DPH7Q9BTV6 452 aa19.15■□□□□ 0.66
SNCA-203ENST00000394986 PARD6BQ9BYG5 372 aa19.15■□□□□ 0.66
SNCA-203ENST00000394986 ULBP3Q9BZM4 244 aa19.15■□□□□ 0.66
SNCA-203ENST00000394986 MRPS30Q9NP92 439 aaKnown RBP19.15■□□□□ 0.66
SNCA-203ENST00000394986 CUEDC1Q9NWM3 386 aaPredicted RBP19.15■□□□□ 0.66
SNCA-203ENST00000394986 ZNF180Q9UJW8 692 aa19.15■□□□□ 0.66
SNCA-203ENST00000394986 SH2B3Q9UQQ2 575 aa19.15■□□□□ 0.66
SNCA-203ENST00000394986 ACOT9Q9Y305 439 aa19.15■□□□□ 0.66
SNCA-203ENST00000394986 USP24Q9UPU5 2620 aa19.14■□□□□ 0.66
SNCA-203ENST00000394986 A0A096LPK6 155 aa19.14■□□□□ 0.65
SNCA-203ENST00000394986 IGKV1-8A0A0C4DH67 115 aa19.14■□□□□ 0.65
SNCA-203ENST00000394986 SRRM3A6NNA2 597 aaPredicted RBP19.14■□□□□ 0.65
SNCA-203ENST00000394986 ATP6V0D1P61421 351 aa19.14■□□□□ 0.65
SNCA-203ENST00000394986 CLN3Q13286 438 aa19.14■□□□□ 0.65
SNCA-203ENST00000394986 C18orf21Q32NC0 220 aaPredicted RBP19.14■□□□□ 0.65
SNCA-203ENST00000394986 LARP7Q4G0J3 582 aaKnown RBP eCLIP19.14■□□□□ 0.65
SNCA-203ENST00000394986 TAF1BQ53T94 588 aaPredicted RBP19.14■□□□□ 0.65
SNCA-203ENST00000394986 PRAMEF13Q5VWM6 474 aa19.14■□□□□ 0.65
SNCA-203ENST00000394986 DNAJC22Q8N4W6 341 aa19.14■□□□□ 0.65
SNCA-203ENST00000394986 AENQ8WTP8 325 aaKnown RBP19.14■□□□□ 0.65
SNCA-203ENST00000394986 EXT2Q93063 718 aa19.14■□□□□ 0.65
SNCA-203ENST00000394986 NXNL1Q96CM4 212 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms