RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 AFTPHQ6ULP2 937 aa20.18■□□□□ 0.82
TRAF4-203ENST00000394925 UNC5DQ6UXZ4 953 aa20.18■□□□□ 0.82
TRAF4-203ENST00000394925 TC2NQ8N9U0 490 aa20.18■□□□□ 0.82
TRAF4-203ENST00000394925 DNAAF3Q8N9W5 541 aa20.18■□□□□ 0.82
TRAF4-203ENST00000394925 STT3BQ8TCJ2 826 aa20.18■□□□□ 0.82
TRAF4-203ENST00000394925 ZUFSPQ96AP4 578 aa20.18■□□□□ 0.82
TRAF4-203ENST00000394925 MIEF2Q96C03 454 aa20.18■□□□□ 0.82
TRAF4-203ENST00000394925 TRIM56Q9BRZ2 755 aaKnown RBP20.18■□□□□ 0.82
TRAF4-203ENST00000394925 TSSK1BQ9BXA7 367 aa20.18■□□□□ 0.82
TRAF4-203ENST00000394925 RUBCNLQ9H714 662 aa20.18■□□□□ 0.82
TRAF4-203ENST00000394925 ZNF304Q9HCX3 659 aa20.18■□□□□ 0.82
TRAF4-203ENST00000394925 PLA2G3Q9NZ20 509 aa20.18■□□□□ 0.82
TRAF4-203ENST00000394925 PKDREJQ9NTG1 2253 aa20.17■□□□□ 0.82
TRAF4-203ENST00000394925 DYTNA2CJ06 578 aa20.17■□□□□ 0.82
TRAF4-203ENST00000394925 HYKKA2RU49 373 aa20.17■□□□□ 0.82
TRAF4-203ENST00000394925 RCCD1A6NED2 376 aa20.17■□□□□ 0.82
TRAF4-203ENST00000394925 SRPX2O60687 465 aaPredicted RBP20.17■□□□□ 0.82
TRAF4-203ENST00000394925 APOA4P06727 396 aa20.17■□□□□ 0.82
TRAF4-203ENST00000394925 ZGLP1P0C6A0 271 aa20.17■□□□□ 0.82
TRAF4-203ENST00000394925 GRNP28799 593 aaKnown RBP20.17■□□□□ 0.82
TRAF4-203ENST00000394925 ZNF324BQ6AW86 544 aaPredicted RBP20.17■□□□□ 0.82
TRAF4-203ENST00000394925 FRMPD2BQ6IN97 320 aa20.17■□□□□ 0.82
TRAF4-203ENST00000394925 LINC00523Q86TU6 105 aa20.17■□□□□ 0.82
TRAF4-203ENST00000394925 KBTBD2Q8IY47 623 aa20.17■□□□□ 0.82
TRAF4-203ENST00000394925 CCDC170Q8IYT3 715 aa20.17■□□□□ 0.82
TRAF4-203ENST00000394925 OR6P1Q8NGX9 317 aa20.17■□□□□ 0.82
TRAF4-203ENST00000394925 RELTQ969Z4 430 aa20.17■□□□□ 0.82
TRAF4-203ENST00000394925 TAAR6Q96RI8 345 aa20.17■□□□□ 0.82
TRAF4-203ENST00000394925 CARD6Q9BX69 1037 aa20.17■□□□□ 0.82
TRAF4-203ENST00000394925 ENAMQ9NRM1 1142 aa20.17■□□□□ 0.82
TRAF4-203ENST00000394925 PTGFRNQ9P2B2 879 aa20.17■□□□□ 0.82
TRAF4-203ENST00000394925 STOX2Q9P2F5 926 aaPredicted RBP20.17■□□□□ 0.82
TRAF4-203ENST00000394925 ZNF282Q9UDV7 671 aaPredicted RBP20.17■□□□□ 0.82
TRAF4-203ENST00000394925 ZC3H7BQ9UGR2 993 aaKnown RBP20.17■□□□□ 0.82
TRAF4-203ENST00000394925 C3orf18Q9UK00 162 aa20.17■□□□□ 0.82
TRAF4-203ENST00000394925 DUSP10Q9Y6W6 482 aa20.17■□□□□ 0.82
TRAF4-203ENST00000394925 GOLGA6L9A6NEM1 432 aa20.16■□□□□ 0.82
TRAF4-203ENST00000394925 TARM1B6A8C7 271 aa20.16■□□□□ 0.82
TRAF4-203ENST00000394925 PCDH17O14917 1159 aa20.16■□□□□ 0.82
TRAF4-203ENST00000394925 PRICKLE3O43900 615 aaPredicted RBP20.16■□□□□ 0.82
TRAF4-203ENST00000394925 USP1O94782 785 aa20.16■□□□□ 0.82
TRAF4-203ENST00000394925 PSMB5P28074 263 aa20.16■□□□□ 0.82
TRAF4-203ENST00000394925 CYLC1P35663 651 aaPredicted RBP20.16■□□□□ 0.82
TRAF4-203ENST00000394925 TDGF1P3P51864 188 aa20.16■□□□□ 0.82
TRAF4-203ENST00000394925 SEMA3AQ14563 771 aa20.16■□□□□ 0.82
TRAF4-203ENST00000394925 TSTD2Q5T7W7 516 aa20.16■□□□□ 0.82
TRAF4-203ENST00000394925 ATG9BQ674R7 924 aa20.16■□□□□ 0.82
TRAF4-203ENST00000394925 KRT222Q8N1A0 295 aa20.16■□□□□ 0.82
TRAF4-203ENST00000394925 OR4L1Q8NH43 312 aa20.16■□□□□ 0.82
TRAF4-203ENST00000394925 NR4A3Q92570 626 aa20.16■□□□□ 0.82
TRAF4-203ENST00000394925 MIPEPQ99797 713 aa20.16■□□□□ 0.82
TRAF4-203ENST00000394925 TMEM121Q9BTD3 319 aa20.16■□□□□ 0.82
TRAF4-203ENST00000394925 FAM169AQ9Y6X4 670 aa20.16■□□□□ 0.82
TRAF4-203ENST00000394925 C2CD3Q4AC94 2353 aa20.16■□□□□ 0.82
TRAF4-203ENST00000394925 TACC2O95359 2948 aa20.16■□□□□ 0.82
TRAF4-203ENST00000394925 PCNX1Q96RV3 2341 aa20.15■□□□□ 0.82
TRAF4-203ENST00000394925 F8P00451 2351 aa20.15■□□□□ 0.82
TRAF4-203ENST00000394925 DCHS2Q6V1P9 2916 aa20.15■□□□□ 0.82
TRAF4-203ENST00000394925 LOC105369274A0A096LPK9 316 aa20.15■□□□□ 0.82
TRAF4-203ENST00000394925 NSG1A0A0A6YYJ2 146 aa20.15■□□□□ 0.82
TRAF4-203ENST00000394925 LOC102723532A0A0G2JNH3 316 aa20.15■□□□□ 0.82
TRAF4-203ENST00000394925 A0A0J9YVX5 310 aa20.15■□□□□ 0.82
TRAF4-203ENST00000394925 HEATR9A2RTY3 570 aa20.15■□□□□ 0.82
TRAF4-203ENST00000394925 FKBP9O95302 570 aa20.15■□□□□ 0.82
TRAF4-203ENST00000394925 GAS8O95995 478 aa20.15■□□□□ 0.82
TRAF4-203ENST00000394925 EIF2S1P05198 315 aaKnown RBP20.15■□□□□ 0.82
TRAF4-203ENST00000394925 TNFSF10P50591 281 aa20.15■□□□□ 0.82
TRAF4-203ENST00000394925 CDH17Q12864 832 aa20.15■□□□□ 0.82
TRAF4-203ENST00000394925 ART3Q13508 389 aa20.15■□□□□ 0.82
TRAF4-203ENST00000394925 FASTKD1Q53R41 847 aaKnown RBP20.15■□□□□ 0.82
TRAF4-203ENST00000394925 VWA2Q5GFL6 755 aa20.15■□□□□ 0.82
TRAF4-203ENST00000394925 TTC23LQ6PF05 361 aa20.15■□□□□ 0.82
TRAF4-203ENST00000394925 GFRALQ6UXV0 394 aa20.15■□□□□ 0.82
TRAF4-203ENST00000394925 ZNF534Q76KX8 674 aa20.15■□□□□ 0.82
TRAF4-203ENST00000394925 OR4N4Q8N0Y3 316 aa20.15■□□□□ 0.82
TRAF4-203ENST00000394925 SIRT6Q8N6T7 355 aa20.15■□□□□ 0.82
TRAF4-203ENST00000394925 RNF214Q8ND24 703 aa20.15■□□□□ 0.82
TRAF4-203ENST00000394925 BRIX1Q8TDN6 353 aaKnown RBP20.15■□□□□ 0.82
TRAF4-203ENST00000394925 PSMF1Q92530 271 aa20.15■□□□□ 0.82
TRAF4-203ENST00000394925 ZNF778Q96MU6 729 aa20.15■□□□□ 0.82
TRAF4-203ENST00000394925 RAB11FIP5Q9BXF6 653 aa20.15■□□□□ 0.82
TRAF4-203ENST00000394925 R3HDM2Q9Y2K5 976 aaKnown RBP20.15■□□□□ 0.82
TRAF4-203ENST00000394925 CSMD2Q7Z408 3487 aa20.15■□□□□ 0.82
TRAF4-203ENST00000394925 ADGRG4Q8IZF6 3080 aa20.14■□□□□ 0.82
TRAF4-203ENST00000394925 TRAV17A0A0B4J275 112 aa20.14■□□□□ 0.81
TRAF4-203ENST00000394925 KRT87PA6NCN2 255 aa20.14■□□□□ 0.81
TRAF4-203ENST00000394925 NRP2O60462 931 aa20.14■□□□□ 0.81
TRAF4-203ENST00000394925 SLCO2B1O94956 709 aa20.14■□□□□ 0.81
TRAF4-203ENST00000394925 F10P00742 488 aa20.14■□□□□ 0.81
TRAF4-203ENST00000394925 PRR35P0CG20 571 aa20.14■□□□□ 0.81
TRAF4-203ENST00000394925 AOAHP28039 575 aa20.14■□□□□ 0.81
TRAF4-203ENST00000394925 TMED2Q15363 201 aa20.14■□□□□ 0.81
TRAF4-203ENST00000394925 PRMT9Q6P2P2 845 aa20.14■□□□□ 0.81
TRAF4-203ENST00000394925 NDUFAF7Q7L592 441 aa20.14■□□□□ 0.81
TRAF4-203ENST00000394925 LDB1Q86U70 411 aaPredicted RBP20.14■□□□□ 0.81
TRAF4-203ENST00000394925 LAPTM4BQ86VI4 370 aa20.14■□□□□ 0.81
TRAF4-203ENST00000394925 ITLN2Q8WWU7 325 aaPredicted RBP20.14■□□□□ 0.81
TRAF4-203ENST00000394925 CALR3Q96L12 384 aaKnown RBP20.14■□□□□ 0.81
TRAF4-203ENST00000394925 CELSR1Q9NYQ6 3014 aa20.14■□□□□ 0.81
TRAF4-203ENST00000394925 TRGV8A0A0C4DH27 118 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms